Full Metadata

Back to Data Summary

"Open Access Data for, "Embryonic cranial cartilage defects in the Fgfr3Y367C/+ mouse model of achondroplasia""


Identification_Information:
Citation:
Citation_Information:
Originator:The Pennsylvania State University
Publication_Date:2023
Title:
"Open Access Data for, "Embryonic cranial cartilage defects in the Fgfr3Y367C/+ mouse model of achondroplasia""
Online_Linkage: http://www.datacommons.psu.edu
Description:
Abstract:
Achondroplasia, the most common chondrodysplasia in humans, is caused by one gain of function mutation localized in the transmembrane domain of fibroblast growth factor receptor 3 (FGFR3) leading to a FGFR3 constitutive activation and subsequent growth plate cartilage and bone defects. Phenotypic features of achondroplasia include macrocephaly with frontal bossing, midface hypoplasia, disproportionate shortening of the extremities, brachydactyly with trident configuration of the hand, and bowed legs. The condition is defined primarily on postnatal effects on bone and cartilage, and embryonic development of tissues in affected individuals is not well studied. Using the Fgfr3Y367C/+ mouse model mimicking achondroplasia, we investigated the developing chondrocranium and Meckel’s cartilage (MC) at embryonic day (E)14.5 and E16.5. Sparse hand annotations of chondrocranial and MC cartilages visualized in phosphotungstic acid enhanced three-dimensional (3D) micro-computed tomography images were used to train our automatic deep learning-based 3D segmentation model and produce 3D isosurfaces of the chondrocranium and MC. Using linear distances estimated from 3D coordinates of landmarks measured on the 3D isosurfaces, we quantified differences in the chondrocranium and MC of Fgfr3Y367C/+ mice relative to that of their unaffected littermates. Statistically significant differences in morphology and growth of the chondrocranium and MC were found, indicating direct effects of this Fgfr3 mutation on embryonic cranial and pharyngeal cartilages, which in turn can secondarily affect cranial and pharyngeal dermal bone development. Our results support the suggestion that early therapeutic intervention during cartilage formation may lessen the effects of this condition.  
Grant support. This work was supported in part by NIH/NICDR grants R01 DE027677, R01 DE031439, and R01 DE 029832 to JTR and the University of Bordeaux Initiative of Excellence (IdEx Bordeaux) to JTR and YH. 
Supplemental_Information:
Susan M. Motch Perrine1, Nishchal Sapkota2, Kazuhiko Kawasaki1, Yejia Zhang2, Danny Z. Chen2, Mizuho Kawasaki1, Emily L. Durham1,3, Yann Heuzé4, Laurence Legeai-Mallet5, Joan T. Richtsmeier1 
1 Department of Anthropology, The Pennsylvania State University, University Park, PA 16802 USA 
2 Department of Computer Science and Engineering, University of Notre Dame, Notre Dame, IN 46556 USA 
3 Department of Pediatrics, Division of Human Genetics of Children’s Hospital of Philadelphia, Philadelphia, PA 19104 USA 
4 Univ. Bordeaux, CNRS, Ministère de la Culture, PACEA, UMR 5199, Pessac, France 
5 Université de Paris Cité, Imagine Institute, Laboratory of Molecular and Physiopathological Bases of Osteochondrodysplasia, INSERM UMR 1163, F-75015 Paris, France 
Time_Period_of_Content:
Time_Period_Information:
Single_Date/Time:
Calendar_Date:2023
Currentness_Reference:
publication date
Keywords:
Theme:
Theme_Keyword_Thesaurus:ISO 19115 Topic Categories
Theme_Keyword:health
Access_Constraints:None.
Use_Constraints:
The University excludes any and all implied warranties, including warranties or merchantability and fitness for a particular purpose.
The University makes no warranty or representation, either express or implied, with respect to the FILES or accompanying documentation, including its quality, performance, merchantability, or fitness for a particular purpose. The FILES and documentation are provided "as is" and the USER assumes the entire risk as to its quality and performance.
The University will not be liable for any direct, indirect, special, incidental, or consequential damages arising out of the use or inability to use the FILES or any accompanying documentation.
The USER is granted permission to translate and add value to the FILES for the use of the FILES on its computer hardware; provided, however, that the USER annually notify the University of any customizing or value-adding work done.
Point_of_Contact:
Contact_Information:
Contact_Person_Primary:
Contact_Person:Susan M. Motch Perrine
Contact_Organization:Penn State
Contact_Position:Ph.D. in Physiology
Contact_Address:
Address_Type:mailing and physical address
Address:
409 Carpenter Building
Address:
Department of Anthropology
City:University Park
State_or_Province:Pennsylvania
Postal_Code:16802
Country:United States
Contact_Voice_Telephone:814-496-4412
Contact_Electronic_Mail_Address:qzk2@psu.edu
Contact Instructions:
https://www.researchgate.net/profile/Susan-Motch-Perrine 
Back to Top
Distribution_Information:
Distributor:
Contact_Information:
Contact_Organization_Primary:
Contact_Organization:Penn State Data Commons
Contact_Address:
Address_Type:mailing and physical address
Address:
115 Land and Water Building
City:University Park
State_or_Province:Pennsylvania
Postal_Code:16802
Country:United States
Contact_Voice_Telephone:(814) 865 - 8792
Contact_Electronic_Mail_Address:datacommons@psu.edu
Distribution_Liability:
The USER shall indemnify, save harmless, and, if requested, defend those parties involved with the development and distribution of this data, their officers, agents, and employees from and against any suits, claims, or actions for injury, death, or property damage arising out of the use of or any defect in the FILES or any accompanying documentation. Those parties involved with the development and distribution excluded any and all implied warranties, including warranties or merchantability and fitness for a particular purpose and makes no warranty or representation, either express or implied, with respect to the FILES or accompanying documentation, including its quality, performance, merchantability, or fitness for a particular purpose. The FILES and documentation are provided "as is" and the USER assumes the entire risk as to its quality and performance. Those parties involved with the development and distribution of this data will not be liable for any direct, indirect, special, incidental, or consequential damages arising out of the use or inability to use the FILES or any accompanying documentation.
Back to Top
Metadata_Reference_Information:
Metadata_Contact:
Contact_Information:
Contact_Organization_Primary:
Contact_Organization:Penn State Data Commons
Contact_Position:Metadata Coordinator
Contact_Address:
Address_Type:mailing address
Address:
115 Land and Water Building
City:University Park
State_or_Province:Pennsylvania
Postal_Code:16802
Country:United States
Contact_Voice_Telephone:814-865-8792
Contact_Electronic_Mail_Address:datacommons@psu.edu
Metadata_Standard_Name:FGDC Content Standards for Digital Geospatial Metadata
Metadata_Standard_Version:FGDC-STD-001-1998
Metadata_Time_Convention:local time
Metadata_Extensions:
Profile_Name:ESRI Metadata Profile
Back to Top