AA_sims/9_1_HEP_TOL/annealing/anneal_HEP_TOL.mdp
AA_sims/9_1_HEP_TOL/annealing/confout.part0002.gro
AA_sims/9_1_HEP_TOL/annealing/grompp.log
AA_sims/9_1_HEP_TOL/annealing/heptane.itp
AA_sims/9_1_HEP_TOL/annealing/md.part0001.log
AA_sims/9_1_HEP_TOL/annealing/md.part0002.log
AA_sims/9_1_HEP_TOL/annealing/mdout-9_1_HEP_TOL.mdp
AA_sims/9_1_HEP_TOL/annealing/mdrun.log
AA_sims/9_1_HEP_TOL/annealing/qsub_xj.sh
AA_sims/9_1_HEP_TOL/annealing/run_gmx.sh
AA_sims/9_1_HEP_TOL/annealing/state.cpt
AA_sims/9_1_HEP_TOL/annealing/state_old.cpt
AA_sims/9_1_HEP_TOL/annealing/state_prev.cpt
AA_sims/9_1_HEP_TOL/annealing/toluene.itp
AA_sims/9_1_HEP_TOL/emin/
AA_sims/9_1_HEP_TOL/emin/#mdrun.log.1#
AA_sims/9_1_HEP_TOL/emin/9-1_heptol_aa_emin.o4138366
AA_sims/9_1_HEP_TOL/emin/9-1_heptol_aa_emin.o4138368
AA_sims/9_1_HEP_TOL/emin/9_1_HEP_TOL.confout.gro
AA_sims/9_1_HEP_TOL/emin/9_1_HEP_TOL.edr
AA_sims/9_1_HEP_TOL/emin/9_1_HEP_TOL.gro
AA_sims/9_1_HEP_TOL/emin/9_1_HEP_TOL.mdp
AA_sims/9_1_HEP_TOL/emin/9_1_HEP_TOL.top
AA_sims/9_1_HEP_TOL/emin/9_1_HEP_TOL.tpr
AA_sims/9_1_HEP_TOL/emin/9_1_HEP_TOL.trr
AA_sims/9_1_HEP_TOL/emin/grompp.log
AA_sims/9_1_HEP_TOL/emin/heptane.itp
AA_sims/9_1_HEP_TOL/emin/mdout-9_1_HEP_TOL.mdp
AA_sims/9_1_HEP_TOL/emin/mdout.mdp
AA_sims/9_1_HEP_TOL/emin/mdrun.log
AA_sims/9_1_HEP_TOL/emin/qsub_xj.sh
AA_sims/9_1_HEP_TOL/emin/run_gmx.sh
AA_sims/9_1_HEP_TOL/emin/toluene.itp
AA_sims/Heptane461/
AA_sims/Heptane461/2body_rerun/
AA_sims/Heptane461/2body_rerun/#md.log.1#
AA_sims/Heptane461/2body_rerun/#md.log.2#
AA_sims/Heptane461/2body_rerun/#mdout.mdp.1#
AA_sims/Heptane461/2body_rerun/#nb_potential.xvg.1#
AA_sims/Heptane461/2body_rerun/#rerun.edr.1#
AA_sims/Heptane461/2body_rerun/#rerun.edr.2#
AA_sims/Heptane461/2body_rerun/hep461_NPT2_inter_2body_rerun.o4184653
AA_sims/Heptane461/2body_rerun/hep461_NPT2_inter_2body_rerun.o4184655
AA_sims/Heptane461/2body_rerun/heptane.2body.itp
AA_sims/Heptane461/2body_rerun/heptane.2body.mdp
AA_sims/Heptane461/2body_rerun/heptane.2body.top
AA_sims/Heptane461/2body_rerun/heptane.2body.tpr
AA_sims/Heptane461/2body_rerun/md.log
AA_sims/Heptane461/2body_rerun/mdout.mdp
AA_sims/Heptane461/2body_rerun/nb_potential.xvg
AA_sims/Heptane461/2body_rerun/qsub_rerun.sh
AA_sims/Heptane461/2body_rerun/rerun.edr
AA_sims/Heptane461/2body_rerun_nvt/
AA_sims/Heptane461/2body_rerun_nvt/2body.tpr
AA_sims/Heptane461/2body_rerun_nvt/hep462_NVT_inter_2body_rerun.o4408738
AA_sims/Heptane461/2body_rerun_nvt/heptane.2body.itp
AA_sims/Heptane461/2body_rerun_nvt/heptane.2body.mdp
AA_sims/Heptane461/2body_rerun_nvt/heptane.2body.top
AA_sims/Heptane461/2body_rerun_nvt/md.log
AA_sims/Heptane461/2body_rerun_nvt/mdout.mdp
AA_sims/Heptane461/2body_rerun_nvt/nb_potential.xvg
AA_sims/Heptane461/2body_rerun_nvt/qsub_rerun.sh
AA_sims/Heptane461/2body_rerun_nvt/rerun.edr
AA_sims/Heptane461/NPT_1/
AA_sims/Heptane461/NPT_1/#mdrun.log.1#
AA_sims/Heptane461/NPT_1/grompp.log
AA_sims/Heptane461/NPT_1/hep461_aa_NPT_1.o4998238
AA_sims/Heptane461/NPT_1/heptane.461.confout.gro
AA_sims/Heptane461/NPT_1/heptane.461.edr
AA_sims/Heptane461/NPT_1/heptane.461.gro
AA_sims/Heptane461/NPT_1/heptane.461.mdp
AA_sims/Heptane461/NPT_1/heptane.461.top
AA_sims/Heptane461/NPT_1/heptane.461.tpr
AA_sims/Heptane461/NPT_1/heptane.itp
AA_sims/Heptane461/NPT_1/mdout-heptane.461.mdp
AA_sims/Heptane461/NPT_1/mdrun.log
AA_sims/Heptane461/NPT_1/qsub_xj.sh
AA_sims/Heptane461/NPT_1/run_gmx.sh
AA_sims/Heptane461/NPT_1/state.cpt
AA_sims/Heptane461/NPT_1/state_prev.cpt
AA_sims/Heptane461/NPT_2/
AA_sims/Heptane461/NPT_2/U_W.xvg
AA_sims/Heptane461/NPT_2/aa_kineticE.xvg
AA_sims/Heptane461/NPT_2/aa_pressures.xvg
AA_sims/Heptane461/NPT_2/aa_volumes.xvg
AA_sims/Heptane461/NPT_2/confout.part0005.gro
AA_sims/Heptane461/NPT_2/full_traj.edr