AA_sims/Heptane461/NPT_2/grompp.log AA_sims/Heptane461/NPT_2/hep461_aa_rerun.o3999003 AA_sims/Heptane461/NPT_2/heptane.461.gro AA_sims/Heptane461/NPT_2/heptane.461.mdp AA_sims/Heptane461/NPT_2/heptane.461.top AA_sims/Heptane461/NPT_2/heptane.461.tpr AA_sims/Heptane461/NPT_2/heptane.itp AA_sims/Heptane461/NPT_2/md.log AA_sims/Heptane461/NPT_2/md.part0002.log AA_sims/Heptane461/NPT_2/md.part0003.log AA_sims/Heptane461/NPT_2/md.part0004.log AA_sims/Heptane461/NPT_2/md.part0005.log AA_sims/Heptane461/NPT_2/mdout-heptane.461.mdp AA_sims/Heptane461/NPT_2/mdout.mdp AA_sims/Heptane461/NPT_2/mdrun.log AA_sims/Heptane461/NPT_2/nb_potential.xvg AA_sims/Heptane461/NPT_2/qsub_xj.sh AA_sims/Heptane461/NPT_2/rerun.edr AA_sims/Heptane461/NPT_2/run_gmx.sh AA_sims/Heptane461/NPT_2/state.cpt AA_sims/Heptane461/NPT_2/state_old.cpt AA_sims/Heptane461/NPT_2/state_prev.cpt AA_sims/Heptane461/NVT_prod/ AA_sims/Heptane461/NVT_prod/#mdrun.log.1# AA_sims/Heptane461/NVT_prod/U_W.xvg AA_sims/Heptane461/NVT_prod/cgmap/ AA_sims/Heptane461/NVT_prod/cgmap/#angle_CTCMCT.xvg.1# AA_sims/Heptane461/NVT_prod/cgmap/CGMap.sh AA_sims/Heptane461/NVT_prod/cgmap/angle_CTCMCT.xvg AA_sims/Heptane461/NVT_prod/cgmap/bond_CMCT.xvg AA_sims/Heptane461/NVT_prod/cgmap/cgheptane.461.tpr AA_sims/Heptane461/NVT_prod/cgmap/cgheptane.461.trr AA_sims/Heptane461/NVT_prod/cgmap/distance.xvg AA_sims/Heptane461/NVT_prod/cgmap/get_distros.sh AA_sims/Heptane461/NVT_prod/cgmap/hep461_NVT_map_distros.o4346672 AA_sims/Heptane461/NVT_prod/cgmap/hep461_NVT_map_distros.o4346673 AA_sims/Heptane461/NVT_prod/cgmap/index.ndx AA_sims/Heptane461/NVT_prod/cgmap/map.heptane.461.top AA_sims/Heptane461/NVT_prod/cgmap/qsub_xj.sh AA_sims/Heptane461/NVT_prod/cgmap/rdf_CM-CM.xvg AA_sims/Heptane461/NVT_prod/cgmap/rdf_CT-CM.xvg AA_sims/Heptane461/NVT_prod/cgmap/rdf_CT-CT.xvg AA_sims/Heptane461/NVT_prod/cgmap/rdf_HEP.xvg