===================================================== Content of ZIP archive ALA12_vacuum_tmp.zip ===================================================== Archive: ALA12_vacuum_tmp.zip Length Date Time Name --------- ---------- ----- ---- 0 11-09-2014 16:49 ALA12_vacuum_tmp/ 0 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/ 0 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/AA-mapped/ 0 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/AA-mapped/0-300ns/ 14574 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/AA-mapped/0-300ns/FESs_Rg_Q.png 30526 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/AA-mapped/0-300ns/FESs_Rg_Q_forfig1.fig 9266 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/AA-mapped/0-300ns/FESs_Rg_Q_trim.png 4482027 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/AA-mapped/0-300ns/Q.dat 17760888 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/AA-mapped/0-300ns/Rg.xvg 7157497 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/AA-mapped/0-300ns/Rg_Q_scatter.xvg 1312 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/AA-mapped/0-300ns/Tick_Marks_Rg_Q_scatter.m 1430 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/AA-mapped/0-300ns/Tick_Marks_Rg_Q_scatter_forfig.m 1430 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/AA-mapped/0-300ns/Tick_Marks_Rg_Q_scatter_forfig_v3.m 2737 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/AA-mapped/0-300ns/angles.xvg 2254 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/AA-mapped/0-300ns/angles_1-2-3.xvg 2645 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/AA-mapped/0-300ns/angles_10-11-12.xvg 2415 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/AA-mapped/0-300ns/angles_2-3-4.xvg 2645 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/AA-mapped/0-300ns/angles_9-10-11.xvg 2024 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/AA-mapped/0-300ns/angles_mid.xvg 12445 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/AA-mapped/0-300ns/bonds.xvg 8607 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/AA-mapped/0-300ns/bonds_1-4.xvg 8930 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/AA-mapped/0-300ns/bonds_1-4_all.xvg 7315 11-09-2014 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ALA12_vacuum_tmp/vacuum/AA-mapped/0-300ns/calc_dist_all1-4bonds.sh 2009 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/AA-mapped/0-300ns/calc_dist_all1-5bonds.sh 2892 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/AA-mapped/0-300ns/calc_dist_endtypes.sh 1680 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/AA-mapped/0-300ns/calc_dist_ind_dist.sh 15019 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/AA-mapped/0-300ns/dihedrals.xvg 7291 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/AA-mapped/0-300ns/dihedrals_1-2-3-4.xvg 3496 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/AA-mapped/0-300ns/dihedrals_2-3-4-5.xvg 4209 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/AA-mapped/0-300ns/dihedrals_8-9-10-11.xvg 4853 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/AA-mapped/0-300ns/dihedrals_9-10-11-12.xvg 3427 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/AA-mapped/0-300ns/dihedrals_mid.xvg 6210672 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/AA-mapped/0-300ns/distance.xvg 6210672 11-09-2014 16:52 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ALA12_vacuum_tmp/vacuum/AA-mapped/rerun_BIdih-angle/table_d0.xvg 0 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/AA-mapped/rerun_BIdih/ 0 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/AA-mapped/rerun_BIdih/0-200ns/ 873 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/AA-mapped/rerun_BIdih/0-200ns/cgvacuum.gro 2091 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/AA-mapped/rerun_BIdih/0-200ns/cgvacuum.mdp 2248 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/AA-mapped/rerun_BIdih/0-200ns/cgvacuum.top 4720 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/AA-mapped/rerun_BIdih/0-200ns/cgvacuum.tpr 10358 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/AA-mapped/rerun_BIdih/0-200ns/mdout.mdp 29961 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/AA-mapped/rerun_BIdih/0-200ns/table_d0.xvg 873 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/AA-mapped/rerun_BIdih/cgvacuum.gro 2091 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/AA-mapped/rerun_BIdih/cgvacuum.mdp 2248 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/AA-mapped/rerun_BIdih/cgvacuum.top 4720 11-09-2014 16:52 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ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/L.Dihedral.total.dihedrals_mid.dat 4991 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/L.Pair_Interaction.total.intra_1-4.dat 3751 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/L.Pair_Interaction.total.intra_1-4mid.dat 6541 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/L.Pair_Interaction.total.intra_1-5.dat 5611 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/L.Pair_Interaction.total.intra_1-5mid.dat 4371 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/L.Pair_Interaction.total.intra_2-5.dat 5921 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/L.Pair_Interaction.total.intra_2-6.dat 6231 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/L.Pair_Interaction.total.intra_7-11.dat 4681 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/L.Pair_Interaction.total.intra_8-11.dat 7781 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/L.Pair_Interaction.total.intra_8-12.dat 5301 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/L.Pair_Interaction.total.intra_9-12.dat 5921 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/L.Pair_Interaction.total.pairs.dat 589 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/L_coeff.Dihedral.total.dihedrals_1-2-3-4.dat 496 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/L_coeff.Dihedral.total.dihedrals_2-3-4-5.dat 589 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/L_coeff.Dihedral.total.dihedrals_8-9-10-11.dat 713 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/L_coeff.Dihedral.total.dihedrals_9-10-11-12.dat 465 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/L_coeff.Dihedral.total.dihedrals_mid.dat 527 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/L_coeff.Pair_Interaction.total.intra_1-4.dat 403 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/L_coeff.Pair_Interaction.total.intra_1-4mid.dat 682 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/L_coeff.Pair_Interaction.total.intra_1-5.dat 589 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/L_coeff.Pair_Interaction.total.intra_1-5mid.dat 465 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/L_coeff.Pair_Interaction.total.intra_2-5.dat 620 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/L_coeff.Pair_Interaction.total.intra_2-6.dat 651 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/L_coeff.Pair_Interaction.total.intra_7-11.dat 496 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/L_coeff.Pair_Interaction.total.intra_8-11.dat 806 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/L_coeff.Pair_Interaction.total.intra_8-12.dat 558 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/L_coeff.Pair_Interaction.total.intra_9-12.dat 620 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/L_coeff.Pair_Interaction.total.pairs.dat 3787 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/Protein_A.itp 10311 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/S.dat 10316 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/S_CONST.dat 930 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/b_forces.Angle.total.angles_1-2-3.dat 1240 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/b_forces.Angle.total.angles_10-11-12.dat 868 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/b_forces.Angle.total.angles_2-3-4.dat 992 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/b_forces.Angle.total.angles_9-10-11.dat 806 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/b_forces.Angle.total.angles_mid.dat 1116 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/b_forces.BondStretch.total.bonds.dat 5890 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/b_forces.Dihedral.total.dihedrals_1-2-3-4.dat 4960 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/b_forces.Dihedral.total.dihedrals_2-3-4-5.dat 5890 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/b_forces.Dihedral.total.dihedrals_8-9-10-11.dat 7130 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/b_forces.Dihedral.total.dihedrals_9-10-11-12.dat 4650 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/b_forces.Dihedral.total.dihedrals_mid.dat 4991 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/b_forces.Pair_Interaction.total.intra_1-4.dat 3751 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/b_forces.Pair_Interaction.total.intra_1-4mid.dat 6541 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/b_forces.Pair_Interaction.total.intra_1-5.dat 5611 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/b_forces.Pair_Interaction.total.intra_1-5mid.dat 4371 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/b_forces.Pair_Interaction.total.intra_2-5.dat 5921 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/b_forces.Pair_Interaction.total.intra_2-6.dat 6231 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/b_forces.Pair_Interaction.total.intra_7-11.dat 4681 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/b_forces.Pair_Interaction.total.intra_8-11.dat 7781 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/b_forces.Pair_Interaction.total.intra_8-12.dat 5301 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/b_forces.Pair_Interaction.total.intra_9-12.dat 5921 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/b_forces.Pair_Interaction.total.pairs.dat 589 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/b_forces_coeff.Dihedral.total.dihedrals_1-2-3-4.dat 496 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/b_forces_coeff.Dihedral.total.dihedrals_2-3-4-5.dat 589 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/b_forces_coeff.Dihedral.total.dihedrals_8-9-10-11.dat 713 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/b_forces_coeff.Dihedral.total.dihedrals_9-10-11-12.dat 465 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/b_forces_coeff.Dihedral.total.dihedrals_mid.dat 527 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/b_forces_coeff.Pair_Interaction.total.intra_1-4.dat 403 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/b_forces_coeff.Pair_Interaction.total.intra_1-4mid.dat 682 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/b_forces_coeff.Pair_Interaction.total.intra_1-5.dat 589 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/b_forces_coeff.Pair_Interaction.total.intra_1-5mid.dat 465 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/b_forces_coeff.Pair_Interaction.total.intra_2-5.dat 620 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/b_forces_coeff.Pair_Interaction.total.intra_2-6.dat 651 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/b_forces_coeff.Pair_Interaction.total.intra_7-11.dat 496 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/b_forces_coeff.Pair_Interaction.total.intra_8-11.dat 806 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/b_forces_coeff.Pair_Interaction.total.intra_8-12.dat 558 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/b_forces_coeff.Pair_Interaction.total.intra_9-12.dat 620 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/b_forces_coeff.Pair_Interaction.total.pairs.dat 930 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/b_struct.Angle.total.angles_1-2-3.dat 1240 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/b_struct.Angle.total.angles_10-11-12.dat 868 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/b_struct.Angle.total.angles_2-3-4.dat 992 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/b_struct.Angle.total.angles_9-10-11.dat 806 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/b_struct.Angle.total.angles_mid.dat 1116 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/b_struct.BondStretch.total.bonds.dat 5890 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/b_struct.Dihedral.total.dihedrals_1-2-3-4.dat 4960 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/b_struct.Dihedral.total.dihedrals_2-3-4-5.dat 5890 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/b_struct.Dihedral.total.dihedrals_8-9-10-11.dat 7130 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/b_struct.Dihedral.total.dihedrals_9-10-11-12.dat 4650 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/b_struct.Dihedral.total.dihedrals_mid.dat 4991 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/b_struct.Pair_Interaction.total.intra_1-4.dat 3751 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/b_struct.Pair_Interaction.total.intra_1-4mid.dat 6541 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/b_struct.Pair_Interaction.total.intra_1-5.dat 5611 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/b_struct.Pair_Interaction.total.intra_1-5mid.dat 4371 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/b_struct.Pair_Interaction.total.intra_2-5.dat 5921 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/b_struct.Pair_Interaction.total.intra_2-6.dat 6231 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/b_struct.Pair_Interaction.total.intra_7-11.dat 4681 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/b_struct.Pair_Interaction.total.intra_8-11.dat 7781 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/b_struct.Pair_Interaction.total.intra_8-12.dat 5301 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/b_struct.Pair_Interaction.total.intra_9-12.dat 5921 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/b_struct.Pair_Interaction.total.pairs.dat 589 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/b_struct_coeff.Dihedral.total.dihedrals_1-2-3-4.dat 496 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/b_struct_coeff.Dihedral.total.dihedrals_2-3-4-5.dat 589 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/b_struct_coeff.Dihedral.total.dihedrals_8-9-10-11.dat 713 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/b_struct_coeff.Dihedral.total.dihedrals_9-10-11-12.dat 465 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/b_struct_coeff.Dihedral.total.dihedrals_mid.dat 527 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/b_struct_coeff.Pair_Interaction.total.intra_1-4.dat 403 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/b_struct_coeff.Pair_Interaction.total.intra_1-4mid.dat 682 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/b_struct_coeff.Pair_Interaction.total.intra_1-5.dat 589 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/b_struct_coeff.Pair_Interaction.total.intra_1-5mid.dat 465 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/b_struct_coeff.Pair_Interaction.total.intra_2-5.dat 620 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/b_struct_coeff.Pair_Interaction.total.intra_2-6.dat 651 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/b_struct_coeff.Pair_Interaction.total.intra_7-11.dat 496 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/b_struct_coeff.Pair_Interaction.total.intra_8-11.dat 806 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/b_struct_coeff.Pair_Interaction.total.intra_8-12.dat 558 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/b_struct_coeff.Pair_Interaction.total.intra_9-12.dat 620 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/b_struct_coeff.Pair_Interaction.total.pairs.dat 58316 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgff-polyALA-FM_noH2O.o3935691 651 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgpolyALA_opls.gro 2091 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgpolyALA_opls.mdp 995 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgpolyALA_opls.top 5032 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgpolyALA_opls.tpr 0 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/ 0 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Emin/ 5785 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Emin/#mdrun.log.1# 338 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Emin/Emin_Commands.txt 4268 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Emin/Protein_A.itp 609 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Emin/cgpolyALA_opls.Emin.gro 585 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Emin/cgpolyALA_opls.gro 5488 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Emin/cgpolyALA_opls.tpr 3177 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Emin/grompp.log 186 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Emin/index.ndx 39 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Emin/mart_polyALA_Equil_POSRES.o3939410 4877 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Emin/mart_trp_zip.Emin.mdp 995 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Emin/mart_trp_zip.top 10461 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Emin/mdout-cgpolyALA_opls.mdp 40284 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Emin/mdrun.log 238 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Emin/qsub.sh 2102 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Emin/run_gmx.sh 145597 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Emin/table.xvg 145862 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Emin/table_A1_A4.xvg 145663 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Emin/table_A1_A5.xvg 145847 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Emin/table_A2_A5.xvg 145732 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Emin/table_A2_A6.xvg 145805 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Emin/table_A3_A6.xvg 145741 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Emin/table_A3_A7.xvg 145805 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Emin/table_A4_A7.xvg 145741 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Emin/table_A4_A8.xvg 145805 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Emin/table_A5_A8.xvg 145741 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Emin/table_A5_A9.xvg 145741 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Emin/table_A6_A10.xvg 145805 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Emin/table_A6_A9.xvg 145805 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Emin/table_A7_A10.xvg 145783 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Emin/table_A7_A11.xvg 145864 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Emin/table_A8_A11.xvg 145609 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Emin/table_A8_A12.xvg 145758 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Emin/table_A9_A12.xvg 14986 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Emin/table_a0.xvg 14980 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Emin/table_a1.xvg 14978 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Emin/table_a2.xvg 14986 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Emin/table_a3.xvg 14989 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Emin/table_a4.xvg 66469 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Emin/table_b0.xvg 29995 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Emin/table_d0.xvg 29924 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Emin/table_d1.xvg 29987 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Emin/table_d2.xvg 30074 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Emin/table_d3.xvg 30018 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Emin/table_d4.xvg 0 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Equil/ 5834 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Equil/#mdrun.log.1# 4268 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Equil/Protein_A.itp 5488 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Equil/cgpolyALA_opls.Equil.tpr 897 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Equil/cgpolyALA_opls.confout.gro 3329 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Equil/grompp.log 186 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Equil/index.ndx 103 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Equil/mart_polyALA_Equil_POSRES.o3939412 4881 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Equil/mart_trp_zip.Equil.mdp 995 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Equil/mart_trp_zip.top 10463 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Equil/mdout-cgpolyALA_opls.mdp 123261 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Equil/mdrun.log 232 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Equil/qsub.sh 2133 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Equil/run_gmx.sh 9056 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Equil/state.cpt 145597 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Equil/table.xvg 145862 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Equil/table_A1_A4.xvg 145663 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Equil/table_A1_A5.xvg 145847 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Equil/table_A2_A5.xvg 145732 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Equil/table_A2_A6.xvg 145805 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Equil/table_A3_A6.xvg 145741 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Equil/table_A3_A7.xvg 145805 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Equil/table_A4_A7.xvg 145741 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Equil/table_A4_A8.xvg 145805 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Equil/table_A5_A8.xvg 145741 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Equil/table_A5_A9.xvg 145741 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Equil/table_A6_A10.xvg 145805 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Equil/table_A6_A9.xvg 145805 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Equil/table_A7_A10.xvg 145783 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Equil/table_A7_A11.xvg 145864 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Equil/table_A8_A11.xvg 145609 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Equil/table_A8_A12.xvg 145758 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Equil/table_A9_A12.xvg 14986 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Equil/table_a0.xvg 14980 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Equil/table_a1.xvg 14978 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Equil/table_a2.xvg 14986 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Equil/table_a3.xvg 14989 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Equil/table_a4.xvg 66469 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Equil/table_b0.xvg 29995 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Equil/table_d0.xvg 29924 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Equil/table_d1.xvg 29987 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Equil/table_d2.xvg 30074 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Equil/table_d3.xvg 30018 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Equil/table_d4.xvg 0 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/ 10890020 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/#distance.xvg.1# 10890020 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/#distance.xvg.2# 5878 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/#mdrun.log.1# 15730 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/FESs_Rg_Q.png 48849 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/FESs_Rg_Q_forfig1.fig 18322159 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/FESs_Rg_Q_forfig1_full.eps 128338 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/FESs_Rg_Q_forfig1_full.fig 30637 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/FESs_Rg_Q_forfig1_full.pdf 32535 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/FESs_Rg_Q_forfig1_full.png 18322162 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/FESs_Rg_Q_forfig1_full_v2.eps 128913 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/FESs_Rg_Q_forfig1_full_v2.fig 32629 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/FESs_Rg_Q_forfig1_full_v2.png 129857 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/FESs_Rg_Q_forfig1_full_v3.fig 4268 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/Protein_A.itp 8188577 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/Q.dat 32450059 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/Rg.xvg 13077627 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/Rg_Q_scatter.xvg 7 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/SJD.dat 1312 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/Tick_Marks_Rg_Q_scatter.m 2090 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/Tick_Marks_Rg_Q_scatter_SJdivAA.m 1422 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/Tick_Marks_Rg_Q_scatter_forfig.m 1337 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/Tick_Marks_Rg_rmsd_scatter.m 2300 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/angles.xvg 1442 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/angles_1-2-3.xvg 1614 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/angles_10-11-12.xvg 1354 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/angles_2-3-4.xvg 1473 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/angles_9-10-11.xvg 1276 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/angles_mid.xvg 11514 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/bonds.xvg 6232 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/bonds_1-4.xvg 6745 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/bonds_1-4_all.xvg 5814 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/bonds_1-4mid.xvg 7942 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/bonds_1-5_all.xvg 6061 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/bonds_2-5.xvg 5814 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/bonds_3-6.xvg 5206 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/bonds_4-7.xvg 5263 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/bonds_5-8.xvg 5244 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/bonds_6-9.xvg 5529 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/bonds_7-10.xvg 6593 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/bonds_8-11.xvg 5909 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/bonds_9-12.xvg 1871 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/calc_dist.sh 2136 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/calc_dist_all1-4bonds.sh 1976 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/calc_dist_all1-5bonds.sh 2058 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/calc_dist_endtypes.sh 1020 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/calc_dist_rdf.sh 5368 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/cgpolyALA_opls.3excl.tpr 4924 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/cgpolyALA_opls.4excl.tpr 897 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/cgpolyALA_opls.confout.gro 585 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/cgpolyALA_opls.gro 5488 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/cgpolyALA_opls.tpr 2760 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/dihedrals.xvg 3003 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/dihedrals_1-2-3-4.xvg 3028 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/dihedrals_2-3-4-5.xvg 2921 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/dihedrals_8-9-10-11.xvg 3329 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/dihedrals_9-10-11-12.xvg 2612 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/dihedrals_mid.xvg 10890020 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/distance.xvg 10890020 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/distance_bonds_1-4.dat.xvg 10890020 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/distance_bonds_1-4mid.dat.xvg 10890020 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/distance_bonds_2-5.dat.xvg 10890020 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/distance_bonds_3-6.dat.xvg 10890020 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/distance_bonds_4-7.dat.xvg 10890020 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/distance_bonds_5-8.dat.xvg 10890020 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/distance_bonds_6-9.dat.xvg 10890020 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/distance_bonds_7-10.dat.xvg 10890020 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/distance_bonds_8-11.dat.xvg 10890020 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/distance_bonds_9-12.dat.xvg 3360 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/grompp.log 2049 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/helicity.py 186 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/index.ndx 558 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/index_dist.ndx 524 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/index_dist_all1-4bonds.ndx 505 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/index_dist_all1-5bonds.ndx 525 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/index_dist_endtypes.ndx 106 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/mart_polyALA_Equil_PRODRUN.o3939546 4870 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/mart_trp_zip.mdp 995 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/mart_trp_zip.top 10454 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/mdout-cgpolyALA_opls.mdp 230468642 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/mdrun.log 232 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/qsub.sh 10314 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/rdf_CA-CA.xvg 10144866 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/rmsd.xvg 574 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/rmsf.xvg 2119 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/run_gmx.sh 363 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/scatter.py 9056 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/state.cpt 9056 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/state_prev.cpt 145597 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/table.xvg 145862 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/table_A1_A4.xvg 145663 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/table_A1_A5.xvg 145847 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/table_A2_A5.xvg 145732 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/table_A2_A6.xvg 145805 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/table_A3_A6.xvg 145741 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/table_A3_A7.xvg 145805 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/table_A4_A7.xvg 145741 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/table_A4_A8.xvg 145805 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/table_A5_A8.xvg 145741 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/table_A5_A9.xvg 145741 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/table_A6_A10.xvg 145805 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/table_A6_A9.xvg 145805 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/table_A7_A10.xvg 145783 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/table_A7_A11.xvg 145864 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/table_A8_A11.xvg 145609 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/table_A8_A12.xvg 145758 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/table_A9_A12.xvg 14986 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/table_a0.xvg 14980 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/table_a1.xvg 14978 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/table_a2.xvg 14986 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/table_a3.xvg 14989 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/table_a4.xvg 66469 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/table_b0.xvg 29995 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/table_d0.xvg 29924 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/table_d1.xvg 29987 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/table_d2.xvg 30074 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/table_d3.xvg 30018 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/table_d4.xvg 0 01-12-2015 02:29 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim_folding/ 0 01-12-2015 02:30 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim_folding/Emin/ 5791 01-12-2015 02:29 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim_folding/Emin/#mdrun.log.1# 338 01-12-2015 02:13 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim_folding/Emin/Emin_Commands.txt 4268 01-12-2015 02:13 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim_folding/Emin/Protein_A.itp 609 01-12-2015 02:29 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim_folding/Emin/cgpolyALA_opls.Emin.gro 3624492 01-12-2015 02:29 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim_folding/Emin/cgpolyALA_opls.edr 585 01-12-2015 02:28 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim_folding/Emin/cgpolyALA_opls.gro 5488 01-12-2015 02:29 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim_folding/Emin/cgpolyALA_opls.tpr 2220 01-12-2015 02:29 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim_folding/Emin/cgpolyALA_opls.trr 726 01-12-2015 02:26 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim_folding/Emin/fcp1.gro 3202 01-12-2015 02:29 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim_folding/Emin/grompp.log 186 01-12-2015 02:13 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim_folding/Emin/index.ndx 38 01-12-2015 02:29 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim_folding/Emin/mart_polyALA_Equil_POSRES.o3813630 4877 01-12-2015 02:13 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim_folding/Emin/mart_trp_zip.Emin.mdp 995 01-12-2015 02:13 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim_folding/Emin/mart_trp_zip.top 10461 01-12-2015 02:29 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim_folding/Emin/mdout-cgpolyALA_opls.mdp 831783 01-12-2015 02:29 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim_folding/Emin/mdrun.log 233 01-12-2015 02:29 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim_folding/Emin/qsub.sh 2102 01-12-2015 02:13 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim_folding/Emin/run_gmx.sh 145597 01-12-2015 02:13 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim_folding/Emin/table.xvg 145862 01-12-2015 02:13 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim_folding/Emin/table_A1_A4.xvg 145663 01-12-2015 02:13 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim_folding/Emin/table_A1_A5.xvg 145847 01-12-2015 02:13 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim_folding/Emin/table_A2_A5.xvg 145732 01-12-2015 02:13 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim_folding/Emin/table_A2_A6.xvg 145805 01-12-2015 02:13 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim_folding/Emin/table_A3_A6.xvg 145741 01-12-2015 02:13 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim_folding/Emin/table_A3_A7.xvg 145805 01-12-2015 02:13 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim_folding/Emin/table_A4_A7.xvg 145741 01-12-2015 02:13 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim_folding/Emin/table_A4_A8.xvg 145805 01-12-2015 02:13 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim_folding/Emin/table_A5_A8.xvg 145741 01-12-2015 02:13 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim_folding/Emin/table_A5_A9.xvg 145741 01-12-2015 02:13 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim_folding/Emin/table_A6_A10.xvg 145805 01-12-2015 02:13 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim_folding/Emin/table_A6_A9.xvg 145805 01-12-2015 02:13 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim_folding/Emin/table_A7_A10.xvg 145783 01-12-2015 02:13 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim_folding/Emin/table_A7_A11.xvg 145864 01-12-2015 02:13 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim_folding/Emin/table_A8_A11.xvg 145609 01-12-2015 02:13 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim_folding/Emin/table_A8_A12.xvg 145758 01-12-2015 02:13 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim_folding/Emin/table_A9_A12.xvg 14986 01-12-2015 02:13 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim_folding/Emin/table_a0.xvg 14980 01-12-2015 02:13 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim_folding/Emin/table_a1.xvg 14978 01-12-2015 02:13 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim_folding/Emin/table_a2.xvg 14986 01-12-2015 02:13 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim_folding/Emin/table_a3.xvg 14989 01-12-2015 02:13 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim_folding/Emin/table_a4.xvg 66469 01-12-2015 02:13 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim_folding/Emin/table_b0.xvg 29995 01-12-2015 02:13 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim_folding/Emin/table_d0.xvg 29924 01-12-2015 02:13 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim_folding/Emin/table_d1.xvg 29987 01-12-2015 02:13 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim_folding/Emin/table_d2.xvg 30074 01-12-2015 02:13 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim_folding/Emin/table_d3.xvg 30018 01-12-2015 02:13 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim_folding/Emin/table_d4.xvg 0 01-12-2015 02:30 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim_folding/Prod_run/ 4268 01-12-2015 02:13 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim_folding/Prod_run/Protein_A.itp 1312 01-12-2015 02:13 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim_folding/Prod_run/Tick_Marks_Rg_Q_scatter.m 2090 01-12-2015 02:13 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim_folding/Prod_run/Tick_Marks_Rg_Q_scatter_SJdivAA.m 1422 01-12-2015 02:13 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim_folding/Prod_run/Tick_Marks_Rg_Q_scatter_forfig.m 1337 01-12-2015 02:13 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim_folding/Prod_run/Tick_Marks_Rg_rmsd_scatter.m 1871 01-12-2015 02:13 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim_folding/Prod_run/calc_dist.sh 2136 01-12-2015 02:13 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim_folding/Prod_run/calc_dist_all1-4bonds.sh 1976 01-12-2015 02:13 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim_folding/Prod_run/calc_dist_all1-5bonds.sh 2058 01-12-2015 02:13 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim_folding/Prod_run/calc_dist_endtypes.sh 1020 01-12-2015 02:13 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim_folding/Prod_run/calc_dist_rdf.sh 5368 01-12-2015 02:13 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim_folding/Prod_run/cgpolyALA_opls.3excl.tpr 4924 01-12-2015 02:13 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim_folding/Prod_run/cgpolyALA_opls.4excl.tpr 585 01-12-2015 02:13 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim_folding/Prod_run/cgpolyALA_opls.gro 2049 01-12-2015 02:13 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim_folding/Prod_run/helicity.py 186 01-12-2015 02:13 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim_folding/Prod_run/index.ndx 558 01-12-2015 02:13 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim_folding/Prod_run/index_dist.ndx 524 01-12-2015 02:13 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim_folding/Prod_run/index_dist_all1-4bonds.ndx 505 01-12-2015 02:13 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim_folding/Prod_run/index_dist_all1-5bonds.ndx 525 01-12-2015 02:13 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim_folding/Prod_run/index_dist_endtypes.ndx 4870 01-12-2015 02:13 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim_folding/Prod_run/mart_trp_zip.mdp 995 01-12-2015 02:13 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim_folding/Prod_run/mart_trp_zip.top 232 01-12-2015 02:13 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim_folding/Prod_run/qsub.sh 2119 01-12-2015 02:13 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim_folding/Prod_run/run_gmx.sh 363 01-12-2015 02:13 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/cgsim_folding/Prod_run/scatter.py 0 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/edit/ 4991 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/edit/f_1-4.dat 3751 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/edit/f_1-4mid.dat 6541 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/edit/f_1-5.dat 5611 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/edit/f_1-5mid.dat 4371 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/edit/f_2-5.dat 5921 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/edit/f_2-6.dat 6231 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/edit/f_7-11.dat 4681 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/edit/f_8-11.dat 7781 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/edit/f_8-12.dat 5301 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/edit/f_9-12.dat 930 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/edit/f_angle_1-2-3.dat 1240 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/edit/f_angle_10-11-12.dat 868 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/edit/f_angle_2-3-4.dat 992 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/edit/f_angle_9-10-11.dat 806 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/edit/f_angle_mid.dat 1116 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/edit/f_bond.dat 9809 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/edit/f_dih_1-2-3-4.dat 9806 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/edit/f_dih_2-3-4-5.dat 10009 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/edit/f_dih_8-9-10-11.dat 9901 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/edit/f_dih_9-10-11-12.dat 9864 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/edit/f_dih_mid.dat 930 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/edit/f_forces.Angle.total.angles_1-2-3.dat 1240 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/edit/f_forces.Angle.total.angles_10-11-12.dat 868 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/edit/f_forces.Angle.total.angles_2-3-4.dat 992 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/edit/f_forces.Angle.total.angles_9-10-11.dat 806 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/edit/f_forces.Angle.total.angles_mid.dat 1116 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/edit/f_forces.BondStretch.total.bonds.dat 4991 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/edit/f_forces.Pair_Interaction.total.intra_1-4.dat 3751 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/edit/f_forces.Pair_Interaction.total.intra_1-4mid.dat 6541 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/edit/f_forces.Pair_Interaction.total.intra_1-5.dat 5611 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/edit/f_forces.Pair_Interaction.total.intra_1-5mid.dat 4371 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/edit/f_forces.Pair_Interaction.total.intra_2-5.dat 5921 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/edit/f_forces.Pair_Interaction.total.intra_2-6.dat 6231 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/edit/f_forces.Pair_Interaction.total.intra_7-11.dat 4681 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/edit/f_forces.Pair_Interaction.total.intra_8-11.dat 7781 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/edit/f_forces.Pair_Interaction.total.intra_8-12.dat 5301 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/edit/f_forces.Pair_Interaction.total.intra_9-12.dat 5921 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/edit/f_forces.Pair_Interaction.total.pairs.dat 5921 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/edit/f_pairs.dat 2691 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/edit/run.make_gmx4_table.sh 145597 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/edit/table.xvg 145805 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/edit/table_1-4mid.xvg 145741 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/edit/table_1-5mid.xvg 145862 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/edit/table_A1_A4.xvg 145663 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/edit/table_A1_A5.xvg 145847 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/edit/table_A2_A5.xvg 145732 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/edit/table_A2_A6.xvg 145783 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/edit/table_A7_A11.xvg 145864 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/edit/table_A8_A11.xvg 145609 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/edit/table_A8_A12.xvg 145758 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/edit/table_A9_A12.xvg 14986 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/edit/table_a0.xvg 14980 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/edit/table_a1.xvg 14978 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/edit/table_a2.xvg 14986 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/edit/table_a3.xvg 14989 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/edit/table_a4.xvg 66469 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/edit/table_b0.xvg 29995 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/edit/table_d0.xvg 29924 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/edit/table_d1.xvg 29987 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/edit/table_d2.xvg 30074 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/edit/table_d3.xvg 30018 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/edit/table_d4.xvg 930 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/f_forces.Angle.total.angles_1-2-3.dat 1240 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/f_forces.Angle.total.angles_10-11-12.dat 868 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/f_forces.Angle.total.angles_2-3-4.dat 992 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/f_forces.Angle.total.angles_9-10-11.dat 806 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/f_forces.Angle.total.angles_mid.dat 1116 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/f_forces.BondStretch.total.bonds.dat 5890 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/f_forces.Dihedral.total.dihedrals_1-2-3-4.dat 4960 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/f_forces.Dihedral.total.dihedrals_2-3-4-5.dat 5890 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/f_forces.Dihedral.total.dihedrals_8-9-10-11.dat 7130 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/f_forces.Dihedral.total.dihedrals_9-10-11-12.dat 4650 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/f_forces.Dihedral.total.dihedrals_mid.dat 4991 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/f_forces.Pair_Interaction.total.intra_1-4.dat 3751 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/f_forces.Pair_Interaction.total.intra_1-4mid.dat 6541 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/f_forces.Pair_Interaction.total.intra_1-5.dat 5611 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/f_forces.Pair_Interaction.total.intra_1-5mid.dat 4371 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/f_forces.Pair_Interaction.total.intra_2-5.dat 5921 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/f_forces.Pair_Interaction.total.intra_2-6.dat 6231 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/f_forces.Pair_Interaction.total.intra_7-11.dat 4681 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/f_forces.Pair_Interaction.total.intra_8-11.dat 7781 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/f_forces.Pair_Interaction.total.intra_8-12.dat 5301 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/f_forces.Pair_Interaction.total.intra_9-12.dat 5921 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/f_forces.Pair_Interaction.total.pairs.dat 589 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/f_forces_coeff.Dihedral.total.dihedrals_1-2-3-4.dat 496 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/f_forces_coeff.Dihedral.total.dihedrals_2-3-4-5.dat 589 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/f_forces_coeff.Dihedral.total.dihedrals_8-9-10-11.dat 713 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/f_forces_coeff.Dihedral.total.dihedrals_9-10-11-12.dat 465 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/f_forces_coeff.Dihedral.total.dihedrals_mid.dat 527 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/f_forces_coeff.Pair_Interaction.total.intra_1-4.dat 403 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/f_forces_coeff.Pair_Interaction.total.intra_1-4mid.dat 682 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/f_forces_coeff.Pair_Interaction.total.intra_1-5.dat 589 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/f_forces_coeff.Pair_Interaction.total.intra_1-5mid.dat 465 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/f_forces_coeff.Pair_Interaction.total.intra_2-5.dat 620 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/f_forces_coeff.Pair_Interaction.total.intra_2-6.dat 651 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/f_forces_coeff.Pair_Interaction.total.intra_7-11.dat 496 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/f_forces_coeff.Pair_Interaction.total.intra_8-11.dat 806 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/f_forces_coeff.Pair_Interaction.total.intra_8-12.dat 558 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/f_forces_coeff.Pair_Interaction.total.intra_9-12.dat 620 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/f_forces_coeff.Pair_Interaction.total.pairs.dat 930 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/f_struct.Angle.total.angles_1-2-3.dat 1240 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/f_struct.Angle.total.angles_10-11-12.dat 868 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/f_struct.Angle.total.angles_2-3-4.dat 992 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/f_struct.Angle.total.angles_9-10-11.dat 806 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/f_struct.Angle.total.angles_mid.dat 1116 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/f_struct.BondStretch.total.bonds.dat 5890 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/f_struct.Dihedral.total.dihedrals_1-2-3-4.dat 4960 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/f_struct.Dihedral.total.dihedrals_2-3-4-5.dat 5890 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/f_struct.Dihedral.total.dihedrals_8-9-10-11.dat 7130 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/f_struct.Dihedral.total.dihedrals_9-10-11-12.dat 4650 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/f_struct.Dihedral.total.dihedrals_mid.dat 4991 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/f_struct.Pair_Interaction.total.intra_1-4.dat 3751 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/f_struct.Pair_Interaction.total.intra_1-4mid.dat 6541 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/f_struct.Pair_Interaction.total.intra_1-5.dat 5611 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/f_struct.Pair_Interaction.total.intra_1-5mid.dat 4371 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/f_struct.Pair_Interaction.total.intra_2-5.dat 5921 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/f_struct.Pair_Interaction.total.intra_2-6.dat 6231 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/f_struct.Pair_Interaction.total.intra_7-11.dat 4681 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/f_struct.Pair_Interaction.total.intra_8-11.dat 7781 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/f_struct.Pair_Interaction.total.intra_8-12.dat 5301 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/f_struct.Pair_Interaction.total.intra_9-12.dat 5921 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/f_struct.Pair_Interaction.total.pairs.dat 589 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/f_struct_coeff.Dihedral.total.dihedrals_1-2-3-4.dat 496 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/f_struct_coeff.Dihedral.total.dihedrals_2-3-4-5.dat 589 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/f_struct_coeff.Dihedral.total.dihedrals_8-9-10-11.dat 713 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/f_struct_coeff.Dihedral.total.dihedrals_9-10-11-12.dat 465 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/f_struct_coeff.Dihedral.total.dihedrals_mid.dat 527 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/f_struct_coeff.Pair_Interaction.total.intra_1-4.dat 403 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/f_struct_coeff.Pair_Interaction.total.intra_1-4mid.dat 682 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/f_struct_coeff.Pair_Interaction.total.intra_1-5.dat 589 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/f_struct_coeff.Pair_Interaction.total.intra_1-5mid.dat 465 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/f_struct_coeff.Pair_Interaction.total.intra_2-5.dat 620 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/f_struct_coeff.Pair_Interaction.total.intra_2-6.dat 651 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/f_struct_coeff.Pair_Interaction.total.intra_7-11.dat 496 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/f_struct_coeff.Pair_Interaction.total.intra_8-11.dat 806 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/f_struct_coeff.Pair_Interaction.total.intra_8-12.dat 558 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/f_struct_coeff.Pair_Interaction.total.intra_9-12.dat 620 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/f_struct_coeff.Pair_Interaction.total.pairs.dat 930 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/g.Angle.total.angles_1-2-3.dat 1240 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/g.Angle.total.angles_10-11-12.dat 868 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/g.Angle.total.angles_2-3-4.dat 992 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/g.Angle.total.angles_9-10-11.dat 806 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/g.Angle.total.angles_mid.dat 1116 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/g.BondStretch.total.bonds.dat 5890 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/g.Dihedral.total.dihedrals_1-2-3-4.dat 4960 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/g.Dihedral.total.dihedrals_2-3-4-5.dat 5890 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/g.Dihedral.total.dihedrals_8-9-10-11.dat 7130 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/g.Dihedral.total.dihedrals_9-10-11-12.dat 4650 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/g.Dihedral.total.dihedrals_mid.dat 4991 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/g.Pair_Interaction.total.intra_1-4.dat 3751 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/g.Pair_Interaction.total.intra_1-4mid.dat 6541 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/g.Pair_Interaction.total.intra_1-5.dat 5611 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/g.Pair_Interaction.total.intra_1-5mid.dat 4371 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/g.Pair_Interaction.total.intra_2-5.dat 5921 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/g.Pair_Interaction.total.intra_2-6.dat 6231 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/g.Pair_Interaction.total.intra_7-11.dat 4681 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/g.Pair_Interaction.total.intra_8-11.dat 7781 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/g.Pair_Interaction.total.intra_8-12.dat 5301 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/g.Pair_Interaction.total.intra_9-12.dat 5921 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/g.Pair_Interaction.total.pairs.dat 930 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/g_cnt.Angle.total.angles_1-2-3.dat 1240 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/g_cnt.Angle.total.angles_10-11-12.dat 868 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/g_cnt.Angle.total.angles_2-3-4.dat 992 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/g_cnt.Angle.total.angles_9-10-11.dat 806 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/g_cnt.Angle.total.angles_mid.dat 1116 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/g_cnt.BondStretch.total.bonds.dat 5890 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/g_cnt.Dihedral.total.dihedrals_1-2-3-4.dat 4960 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/g_cnt.Dihedral.total.dihedrals_2-3-4-5.dat 5890 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/g_cnt.Dihedral.total.dihedrals_8-9-10-11.dat 7130 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/g_cnt.Dihedral.total.dihedrals_9-10-11-12.dat 4650 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/g_cnt.Dihedral.total.dihedrals_mid.dat 4991 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/g_cnt.Pair_Interaction.total.intra_1-4.dat 3751 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/g_cnt.Pair_Interaction.total.intra_1-4mid.dat 6541 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/g_cnt.Pair_Interaction.total.intra_1-5.dat 5611 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/g_cnt.Pair_Interaction.total.intra_1-5mid.dat 4371 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/g_cnt.Pair_Interaction.total.intra_2-5.dat 5921 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/g_cnt.Pair_Interaction.total.intra_2-6.dat 6231 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/g_cnt.Pair_Interaction.total.intra_7-11.dat 4681 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/g_cnt.Pair_Interaction.total.intra_8-11.dat 7781 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/g_cnt.Pair_Interaction.total.intra_8-12.dat 5301 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/g_cnt.Pair_Interaction.total.intra_9-12.dat 5921 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/g_cnt.Pair_Interaction.total.pairs.dat 589 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/g_cnt_coeff.Dihedral.total.dihedrals_1-2-3-4.dat 496 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/g_cnt_coeff.Dihedral.total.dihedrals_2-3-4-5.dat 589 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/g_cnt_coeff.Dihedral.total.dihedrals_8-9-10-11.dat 713 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/g_cnt_coeff.Dihedral.total.dihedrals_9-10-11-12.dat 465 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/g_cnt_coeff.Dihedral.total.dihedrals_mid.dat 527 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/g_cnt_coeff.Pair_Interaction.total.intra_1-4.dat 403 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/g_cnt_coeff.Pair_Interaction.total.intra_1-4mid.dat 682 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/g_cnt_coeff.Pair_Interaction.total.intra_1-5.dat 589 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/g_cnt_coeff.Pair_Interaction.total.intra_1-5mid.dat 465 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/g_cnt_coeff.Pair_Interaction.total.intra_2-5.dat 620 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/g_cnt_coeff.Pair_Interaction.total.intra_2-6.dat 651 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/g_cnt_coeff.Pair_Interaction.total.intra_7-11.dat 496 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/g_cnt_coeff.Pair_Interaction.total.intra_8-11.dat 806 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/g_cnt_coeff.Pair_Interaction.total.intra_8-12.dat 558 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/g_cnt_coeff.Pair_Interaction.total.intra_9-12.dat 620 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/g_cnt_coeff.Pair_Interaction.total.pairs.dat 589 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/g_coeff.Dihedral.total.dihedrals_1-2-3-4.dat 496 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/g_coeff.Dihedral.total.dihedrals_2-3-4-5.dat 589 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/g_coeff.Dihedral.total.dihedrals_8-9-10-11.dat 713 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/g_coeff.Dihedral.total.dihedrals_9-10-11-12.dat 465 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/g_coeff.Dihedral.total.dihedrals_mid.dat 527 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/g_coeff.Pair_Interaction.total.intra_1-4.dat 403 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/g_coeff.Pair_Interaction.total.intra_1-4mid.dat 682 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/g_coeff.Pair_Interaction.total.intra_1-5.dat 589 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/g_coeff.Pair_Interaction.total.intra_1-5mid.dat 465 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/g_coeff.Pair_Interaction.total.intra_2-5.dat 620 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/g_coeff.Pair_Interaction.total.intra_2-6.dat 651 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/g_coeff.Pair_Interaction.total.intra_7-11.dat 496 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/g_coeff.Pair_Interaction.total.intra_8-11.dat 806 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/g_coeff.Pair_Interaction.total.intra_8-12.dat 558 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/g_coeff.Pair_Interaction.total.intra_9-12.dat 620 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/g_coeff.Pair_Interaction.total.pairs.dat 106 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/inp.txt 145845 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/log.txt 23367 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/out.total.txt 4892 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/par.txt 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/ 1860 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/L.Angle.total.angles_1-2-3.dat 2511 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/L.Angle.total.angles_10-11-12.dat 1736 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/L.Angle.total.angles_2-3-4.dat 1984 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/L.Angle.total.angles_9-10-11.dat 1612 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/L.Angle.total.angles_mid.dat 2139 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/L.BondStretch.total.bonds.dat 2666 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/L.Dihedral.total.dihedrals_1-2-3-4.dat 2325 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/L.Dihedral.total.dihedrals_2-3-4-5.dat 2728 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/L.Dihedral.total.dihedrals_8-9-10-11.dat 3503 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/L.Dihedral.total.dihedrals_9-10-11-12.dat 2108 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/L.Dihedral.total.dihedrals_mid.dat 1860 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/L.Pair_Interaction.total.intra_1-4.dat 1457 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/L.Pair_Interaction.total.intra_1-4mid.dat 2604 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/L.Pair_Interaction.total.intra_1-5.dat 2170 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/L.Pair_Interaction.total.intra_1-5mid.dat 1643 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/L.Pair_Interaction.total.intra_2-5.dat 2356 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/L.Pair_Interaction.total.intra_2-6.dat 2449 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/L.Pair_Interaction.total.intra_7-11.dat 1829 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/L.Pair_Interaction.total.intra_8-11.dat 3038 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/L.Pair_Interaction.total.intra_8-12.dat 2108 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/L.Pair_Interaction.total.intra_9-12.dat 2449 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/L.Pair_Interaction.total.pairs.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.angles_1-2-3.angles_1-2-3.dat 199340 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.angles_1-2-3.bonds.dat 139523 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.angles_1-2-3.intra_1-4.dat 110836 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.angles_1-2-3.intra_1-4mid.dat 167895 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.angles_1-2-3.intra_1-5.dat 125675 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.angles_1-2-3.intra_1-5mid.dat 100761 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.angles_1-2-3.intra_2-5.dat 149422 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.angles_1-2-3.intra_2-6.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.angles_1-2-3.intra_7-11.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.angles_1-2-3.intra_8-11.dat 0 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.angles_1-2-3.intra_8-12.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.angles_1-2-3.intra_9-12.dat 221419 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.angles_1-2-3.pairs.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.angles_10-11-12.angles_1-2-3.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.angles_10-11-12.angles_10-11-12.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.angles_10-11-12.angles_2-3-4.dat 226706 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.angles_10-11-12.angles_9-10-11.dat 179727 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.angles_10-11-12.angles_mid.dat 260715 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.angles_10-11-12.bonds.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.angles_10-11-12.intra_1-4.dat 140928 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.angles_10-11-12.intra_1-4mid.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.angles_10-11-12.intra_1-5.dat 188767 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.angles_10-11-12.intra_1-5mid.dat 0 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.angles_10-11-12.intra_2-5.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.angles_10-11-12.intra_2-6.dat 229491 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.angles_10-11-12.intra_7-11.dat 159132 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.angles_10-11-12.intra_8-11.dat 227632 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.angles_10-11-12.intra_8-12.dat 193971 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.angles_10-11-12.intra_9-12.dat 316707 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.angles_10-11-12.pairs.dat 139634 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.angles_2-3-4.angles_1-2-3.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.angles_2-3-4.angles_2-3-4.dat 185808 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.angles_2-3-4.bonds.dat 132963 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.angles_2-3-4.intra_1-4.dat 108652 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.angles_2-3-4.intra_1-4mid.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.angles_2-3-4.intra_1-5.dat 136033 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.angles_2-3-4.intra_1-5mid.dat 119966 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.angles_2-3-4.intra_2-5.dat 142311 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.angles_2-3-4.intra_2-6.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.angles_2-3-4.intra_7-11.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.angles_2-3-4.intra_8-11.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.angles_2-3-4.intra_8-12.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.angles_2-3-4.intra_9-12.dat 202484 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.angles_2-3-4.pairs.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.angles_9-10-11.angles_1-2-3.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.angles_9-10-11.angles_2-3-4.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.angles_9-10-11.angles_9-10-11.dat 173049 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.angles_9-10-11.angles_mid.dat 214587 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.angles_9-10-11.bonds.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.angles_9-10-11.intra_1-4.dat 135086 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.angles_9-10-11.intra_1-4mid.dat 0 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.angles_9-10-11.intra_1-5.dat 172679 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.angles_9-10-11.intra_1-5mid.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.angles_9-10-11.intra_2-5.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.angles_9-10-11.intra_2-6.dat 156046 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.angles_9-10-11.intra_7-11.dat 147313 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.angles_9-10-11.intra_8-11.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.angles_9-10-11.intra_8-12.dat 154693 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.angles_9-10-11.intra_9-12.dat 246432 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.angles_9-10-11.pairs.dat 134820 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.angles_mid.angles_1-2-3.dat 141984 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.angles_mid.angles_2-3-4.dat 177064 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.angles_mid.angles_mid.dat 215519 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.angles_mid.bonds.dat 129927 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.angles_mid.intra_1-4.dat 159714 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.angles_mid.intra_1-4mid.dat 157485 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.angles_mid.intra_1-5.dat 174918 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.angles_mid.intra_1-5mid.dat 116031 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.angles_mid.intra_2-5.dat 135299 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.angles_mid.intra_2-6.dat 152376 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.angles_mid.intra_7-11.dat 135798 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.angles_mid.intra_8-11.dat 193212 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.angles_mid.intra_8-12.dat 153415 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.angles_mid.intra_9-12.dat 236668 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.angles_mid.pairs.dat 145894 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.bonds.bonds.dat 154818 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.bonds.intra_1-4.dat 150320 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.bonds.intra_1-4mid.dat 215725 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.bonds.intra_1-5.dat 197586 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.bonds.intra_1-5mid.dat 123569 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.bonds.intra_2-5.dat 178254 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.bonds.intra_2-6.dat 189141 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.bonds.intra_7-11.dat 138789 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.bonds.intra_8-11.dat 239898 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.bonds.intra_8-12.dat 166788 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.bonds.intra_9-12.dat 295281 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.bonds.pairs.dat 210168 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_1-2-3-4.angles_1-2-3.dat 0 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_1-2-3-4.angles_10-11-12.dat 187908 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_1-2-3-4.angles_2-3-4.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_1-2-3-4.angles_9-10-11.dat 211036 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_1-2-3-4.angles_mid.dat 245756 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_1-2-3-4.bonds.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_1-2-3-4.dihedrals_1-2-3-4.dat 120572 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_1-2-3-4.intra_1-4.dat 166516 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_1-2-3-4.intra_1-4mid.dat 163535 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_1-2-3-4.intra_1-5.dat 207929 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_1-2-3-4.intra_1-5mid.dat 170522 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_1-2-3-4.intra_2-5.dat 210290 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_1-2-3-4.intra_2-6.dat 0 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_1-2-3-4.intra_7-11.dat 0 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_1-2-3-4.intra_8-11.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_1-2-3-4.intra_8-12.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_1-2-3-4.intra_9-12.dat 349581 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_1-2-3-4.pairs.dat 191190 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_2-3-4-5.angles_1-2-3.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_2-3-4-5.angles_10-11-12.dat 175938 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_2-3-4-5.angles_2-3-4.dat 0 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_2-3-4-5.angles_9-10-11.dat 196183 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_2-3-4-5.angles_mid.dat 237044 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_2-3-4-5.bonds.dat 237196 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_2-3-4-5.dihedrals_1-2-3-4.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_2-3-4-5.dihedrals_2-3-4-5.dat 163755 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_2-3-4-5.intra_1-4.dat 166521 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_2-3-4-5.intra_1-4mid.dat 159947 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_2-3-4-5.intra_1-5.dat 218052 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_2-3-4-5.intra_1-5mid.dat 102787 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_2-3-4-5.intra_2-5.dat 138626 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_2-3-4-5.intra_2-6.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_2-3-4-5.intra_7-11.dat 0 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_2-3-4-5.intra_8-11.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_2-3-4-5.intra_8-12.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_2-3-4-5.intra_9-12.dat 295523 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_2-3-4-5.pairs.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_8-9-10-11.angles_1-2-3.dat 268357 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_8-9-10-11.angles_10-11-12.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_8-9-10-11.angles_2-3-4.dat 190890 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_8-9-10-11.angles_9-10-11.dat 232777 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_8-9-10-11.angles_mid.dat 271991 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_8-9-10-11.bonds.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_8-9-10-11.dihedrals_1-2-3-4.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_8-9-10-11.dihedrals_2-3-4-5.dat 0 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_8-9-10-11.dihedrals_8-9-10-11.dat 292215 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_8-9-10-11.dihedrals_mid.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_8-9-10-11.intra_1-4.dat 196663 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_8-9-10-11.intra_1-4mid.dat 0 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_8-9-10-11.intra_1-5.dat 254588 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_8-9-10-11.intra_1-5mid.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_8-9-10-11.intra_2-5.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_8-9-10-11.intra_2-6.dat 162656 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_8-9-10-11.intra_7-11.dat 122833 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_8-9-10-11.intra_8-11.dat 242727 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_8-9-10-11.intra_8-12.dat 204439 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_8-9-10-11.intra_9-12.dat 346697 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_8-9-10-11.pairs.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_9-10-11-12.angles_1-2-3.dat 257586 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_9-10-11-12.angles_10-11-12.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_9-10-11-12.angles_2-3-4.dat 287700 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_9-10-11-12.angles_9-10-11.dat 273662 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_9-10-11-12.angles_mid.dat 301983 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_9-10-11-12.bonds.dat 0 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_9-10-11-12.dihedrals_1-2-3-4.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_9-10-11-12.dihedrals_2-3-4-5.dat 366443 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_9-10-11-12.dihedrals_8-9-10-11.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_9-10-11-12.dihedrals_9-10-11-12.dat 318555 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_9-10-11-12.dihedrals_mid.dat 0 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_9-10-11-12.intra_1-4.dat 234160 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_9-10-11-12.intra_1-4mid.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_9-10-11-12.intra_1-5.dat 279599 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_9-10-11-12.intra_1-5mid.dat 0 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_9-10-11-12.intra_2-5.dat 0 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_9-10-11-12.intra_2-6.dat 304326 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_9-10-11-12.intra_7-11.dat 219863 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_9-10-11-12.intra_8-11.dat 240899 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_9-10-11-12.intra_8-12.dat 179381 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_9-10-11-12.intra_9-12.dat 462028 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_9-10-11-12.pairs.dat 146024 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_mid.angles_1-2-3.dat 200739 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_mid.angles_10-11-12.dat 166681 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_mid.angles_2-3-4.dat 202279 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_mid.angles_9-10-11.dat 254669 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_mid.angles_mid.dat 258177 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_mid.bonds.dat 229865 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_mid.dihedrals_1-2-3-4.dat 235079 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_mid.dihedrals_2-3-4-5.dat 307694 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_mid.dihedrals_mid.dat 160851 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_mid.intra_1-4.dat 230285 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_mid.intra_1-4mid.dat 218485 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_mid.intra_1-5.dat 279421 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_mid.intra_1-5mid.dat 159914 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_mid.intra_2-5.dat 210219 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_mid.intra_2-6.dat 230103 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_mid.intra_7-11.dat 178535 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_mid.intra_8-11.dat 259837 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_mid.intra_8-12.dat 190045 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_mid.intra_9-12.dat 342734 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.dihedrals_mid.pairs.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.intra_1-4.intra_1-4.dat 127797 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.intra_1-4.intra_1-5.dat 131922 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.intra_1-4.intra_1-5mid.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.intra_1-4.intra_2-6.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.intra_1-4.intra_7-11.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.intra_1-4.intra_8-12.dat 205752 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.intra_1-4.pairs.dat 98742 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.intra_1-4mid.intra_1-4.dat 110544 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.intra_1-4mid.intra_1-4mid.dat 126462 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.intra_1-4mid.intra_1-5.dat 173906 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.intra_1-4mid.intra_1-5mid.dat 89250 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.intra_1-4mid.intra_2-5.dat 133128 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.intra_1-4mid.intra_2-6.dat 140457 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.intra_1-4mid.intra_7-11.dat 144186 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.intra_1-4mid.intra_8-12.dat 201757 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.intra_1-4mid.pairs.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.intra_1-5.intra_1-5.dat 279990 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.intra_1-5.pairs.dat 178332 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.intra_1-5mid.intra_1-5.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.intra_1-5mid.intra_1-5mid.dat 176316 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.intra_1-5mid.intra_2-6.dat 276642 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.intra_1-5mid.pairs.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.intra_2-5.intra_1-4.dat 130052 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.intra_2-5.intra_1-5.dat 120876 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.intra_2-5.intra_1-5mid.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.intra_2-5.intra_2-5.dat 107174 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.intra_2-5.intra_2-6.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.intra_2-5.intra_7-11.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.intra_2-5.intra_8-12.dat 180472 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.intra_2-5.pairs.dat 0 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.intra_2-6.intra_1-5.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.intra_2-6.intra_2-6.dat 252877 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.intra_2-6.pairs.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.intra_7-11.intra_1-5.dat 177282 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.intra_7-11.intra_1-5mid.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.intra_7-11.intra_2-6.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.intra_7-11.intra_7-11.dat 273869 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.intra_7-11.pairs.dat 0 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.intra_8-11.intra_1-4.dat 92694 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.intra_8-11.intra_1-4mid.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.intra_8-11.intra_1-5.dat 124824 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.intra_8-11.intra_1-5mid.dat 0 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.intra_8-11.intra_2-5.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.intra_8-11.intra_2-6.dat 133168 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.intra_8-11.intra_7-11.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.intra_8-11.intra_8-11.dat 162237 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.intra_8-11.intra_8-12.dat 191252 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.intra_8-11.pairs.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.intra_8-12.intra_1-5.dat 195384 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.intra_8-12.intra_1-5mid.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.intra_8-12.intra_2-6.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.intra_8-12.intra_7-11.dat 0 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.intra_8-12.intra_8-12.dat 333542 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.intra_8-12.pairs.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.intra_9-12.intra_1-4.dat 109326 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.intra_9-12.intra_1-4mid.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.intra_9-12.intra_1-5.dat 139146 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.intra_9-12.intra_1-5mid.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.intra_9-12.intra_2-5.dat 0 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.intra_9-12.intra_2-6.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.intra_9-12.intra_7-11.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.intra_9-12.intra_8-11.dat 184213 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.intra_9-12.intra_8-12.dat 0 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.intra_9-12.intra_9-12.dat 236513 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.intra_9-12.pairs.dat 359044 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M.pairs.pairs.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.angles_1-2-3.angles_1-2-3.dat 199340 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.angles_1-2-3.bonds.dat 139523 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.angles_1-2-3.intra_1-4.dat 110836 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.angles_1-2-3.intra_1-4mid.dat 167895 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.angles_1-2-3.intra_1-5.dat 125675 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.angles_1-2-3.intra_1-5mid.dat 100761 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.angles_1-2-3.intra_2-5.dat 149422 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.angles_1-2-3.intra_2-6.dat 0 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.angles_1-2-3.intra_7-11.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.angles_1-2-3.intra_8-11.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.angles_1-2-3.intra_8-12.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.angles_1-2-3.intra_9-12.dat 221419 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.angles_1-2-3.pairs.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.angles_10-11-12.angles_1-2-3.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.angles_10-11-12.angles_10-11-12.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.angles_10-11-12.angles_2-3-4.dat 226706 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.angles_10-11-12.angles_9-10-11.dat 179727 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.angles_10-11-12.angles_mid.dat 260715 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.angles_10-11-12.bonds.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.angles_10-11-12.intra_1-4.dat 140928 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.angles_10-11-12.intra_1-4mid.dat 0 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.angles_10-11-12.intra_1-5.dat 188767 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.angles_10-11-12.intra_1-5mid.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.angles_10-11-12.intra_2-5.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.angles_10-11-12.intra_2-6.dat 229491 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.angles_10-11-12.intra_7-11.dat 159132 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.angles_10-11-12.intra_8-11.dat 227632 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.angles_10-11-12.intra_8-12.dat 193971 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.angles_10-11-12.intra_9-12.dat 316707 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.angles_10-11-12.pairs.dat 139634 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.angles_2-3-4.angles_1-2-3.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.angles_2-3-4.angles_2-3-4.dat 185808 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.angles_2-3-4.bonds.dat 132963 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.angles_2-3-4.intra_1-4.dat 108652 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.angles_2-3-4.intra_1-4mid.dat 0 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.angles_2-3-4.intra_1-5.dat 136033 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.angles_2-3-4.intra_1-5mid.dat 119966 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.angles_2-3-4.intra_2-5.dat 142311 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.angles_2-3-4.intra_2-6.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.angles_2-3-4.intra_7-11.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.angles_2-3-4.intra_8-11.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.angles_2-3-4.intra_8-12.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.angles_2-3-4.intra_9-12.dat 202484 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.angles_2-3-4.pairs.dat 0 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.angles_9-10-11.angles_1-2-3.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.angles_9-10-11.angles_2-3-4.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.angles_9-10-11.angles_9-10-11.dat 173049 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.angles_9-10-11.angles_mid.dat 214587 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.angles_9-10-11.bonds.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.angles_9-10-11.intra_1-4.dat 135086 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.angles_9-10-11.intra_1-4mid.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.angles_9-10-11.intra_1-5.dat 172679 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.angles_9-10-11.intra_1-5mid.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.angles_9-10-11.intra_2-5.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.angles_9-10-11.intra_2-6.dat 156046 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.angles_9-10-11.intra_7-11.dat 147313 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.angles_9-10-11.intra_8-11.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.angles_9-10-11.intra_8-12.dat 154693 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.angles_9-10-11.intra_9-12.dat 246432 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.angles_9-10-11.pairs.dat 134820 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.angles_mid.angles_1-2-3.dat 141984 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.angles_mid.angles_2-3-4.dat 183070 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.angles_mid.angles_mid.dat 215519 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.angles_mid.bonds.dat 129927 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.angles_mid.intra_1-4.dat 159714 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.angles_mid.intra_1-4mid.dat 157485 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.angles_mid.intra_1-5.dat 174918 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.angles_mid.intra_1-5mid.dat 116031 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.angles_mid.intra_2-5.dat 135299 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.angles_mid.intra_2-6.dat 152376 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.angles_mid.intra_7-11.dat 135798 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.angles_mid.intra_8-11.dat 193212 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.angles_mid.intra_8-12.dat 153415 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.angles_mid.intra_9-12.dat 236668 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.angles_mid.pairs.dat 152055 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.bonds.bonds.dat 154818 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.bonds.intra_1-4.dat 150320 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.bonds.intra_1-4mid.dat 215725 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.bonds.intra_1-5.dat 197586 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.bonds.intra_1-5mid.dat 123569 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.bonds.intra_2-5.dat 178254 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.bonds.intra_2-6.dat 189141 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.bonds.intra_7-11.dat 138789 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.bonds.intra_8-11.dat 239898 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.bonds.intra_8-12.dat 166788 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.bonds.intra_9-12.dat 295281 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.bonds.pairs.dat 210168 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_1-2-3-4.angles_1-2-3.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_1-2-3-4.angles_10-11-12.dat 187908 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_1-2-3-4.angles_2-3-4.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_1-2-3-4.angles_9-10-11.dat 211036 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_1-2-3-4.angles_mid.dat 245756 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_1-2-3-4.bonds.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_1-2-3-4.dihedrals_1-2-3-4.dat 120572 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_1-2-3-4.intra_1-4.dat 166516 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_1-2-3-4.intra_1-4mid.dat 163535 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_1-2-3-4.intra_1-5.dat 207929 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_1-2-3-4.intra_1-5mid.dat 170522 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_1-2-3-4.intra_2-5.dat 210290 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_1-2-3-4.intra_2-6.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_1-2-3-4.intra_7-11.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_1-2-3-4.intra_8-11.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_1-2-3-4.intra_8-12.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_1-2-3-4.intra_9-12.dat 349581 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_1-2-3-4.pairs.dat 191190 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_2-3-4-5.angles_1-2-3.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_2-3-4-5.angles_10-11-12.dat 175938 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_2-3-4-5.angles_2-3-4.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_2-3-4-5.angles_9-10-11.dat 196183 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_2-3-4-5.angles_mid.dat 237044 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_2-3-4-5.bonds.dat 237196 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_2-3-4-5.dihedrals_1-2-3-4.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_2-3-4-5.dihedrals_2-3-4-5.dat 163755 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_2-3-4-5.intra_1-4.dat 166521 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_2-3-4-5.intra_1-4mid.dat 159947 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_2-3-4-5.intra_1-5.dat 218052 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_2-3-4-5.intra_1-5mid.dat 102787 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_2-3-4-5.intra_2-5.dat 138626 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_2-3-4-5.intra_2-6.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_2-3-4-5.intra_7-11.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_2-3-4-5.intra_8-11.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_2-3-4-5.intra_8-12.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_2-3-4-5.intra_9-12.dat 295523 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_2-3-4-5.pairs.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_8-9-10-11.angles_1-2-3.dat 268357 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_8-9-10-11.angles_10-11-12.dat 0 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_8-9-10-11.angles_2-3-4.dat 190890 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_8-9-10-11.angles_9-10-11.dat 232777 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_8-9-10-11.angles_mid.dat 271991 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_8-9-10-11.bonds.dat 0 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_8-9-10-11.dihedrals_1-2-3-4.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_8-9-10-11.dihedrals_2-3-4-5.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_8-9-10-11.dihedrals_8-9-10-11.dat 292215 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_8-9-10-11.dihedrals_mid.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_8-9-10-11.intra_1-4.dat 196663 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_8-9-10-11.intra_1-4mid.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_8-9-10-11.intra_1-5.dat 254588 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_8-9-10-11.intra_1-5mid.dat 0 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_8-9-10-11.intra_2-5.dat 0 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_8-9-10-11.intra_2-6.dat 162656 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_8-9-10-11.intra_7-11.dat 122833 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_8-9-10-11.intra_8-11.dat 242727 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_8-9-10-11.intra_8-12.dat 204439 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_8-9-10-11.intra_9-12.dat 346697 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_8-9-10-11.pairs.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_9-10-11-12.angles_1-2-3.dat 257586 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_9-10-11-12.angles_10-11-12.dat 0 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_9-10-11-12.angles_2-3-4.dat 287700 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_9-10-11-12.angles_9-10-11.dat 273662 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_9-10-11-12.angles_mid.dat 301983 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_9-10-11-12.bonds.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_9-10-11-12.dihedrals_1-2-3-4.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_9-10-11-12.dihedrals_2-3-4-5.dat 366443 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_9-10-11-12.dihedrals_8-9-10-11.dat 0 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_9-10-11-12.dihedrals_9-10-11-12.dat 318555 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_9-10-11-12.dihedrals_mid.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_9-10-11-12.intra_1-4.dat 234160 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_9-10-11-12.intra_1-4mid.dat 0 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_9-10-11-12.intra_1-5.dat 279599 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_9-10-11-12.intra_1-5mid.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_9-10-11-12.intra_2-5.dat 0 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_9-10-11-12.intra_2-6.dat 304326 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_9-10-11-12.intra_7-11.dat 219863 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_9-10-11-12.intra_8-11.dat 240899 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_9-10-11-12.intra_8-12.dat 179381 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_9-10-11-12.intra_9-12.dat 462028 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_9-10-11-12.pairs.dat 146024 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_mid.angles_1-2-3.dat 200739 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_mid.angles_10-11-12.dat 166681 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_mid.angles_2-3-4.dat 202279 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_mid.angles_9-10-11.dat 254669 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_mid.angles_mid.dat 258177 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_mid.bonds.dat 229865 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_mid.dihedrals_1-2-3-4.dat 235079 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_mid.dihedrals_2-3-4-5.dat 315698 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_mid.dihedrals_mid.dat 160851 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_mid.intra_1-4.dat 230285 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_mid.intra_1-4mid.dat 218485 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_mid.intra_1-5.dat 279421 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_mid.intra_1-5mid.dat 159914 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_mid.intra_2-5.dat 210219 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_mid.intra_2-6.dat 230103 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_mid.intra_7-11.dat 178535 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_mid.intra_8-11.dat 259837 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_mid.intra_8-12.dat 190045 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_mid.intra_9-12.dat 342734 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.dihedrals_mid.pairs.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.intra_1-4.intra_1-4.dat 127797 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.intra_1-4.intra_1-5.dat 131922 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.intra_1-4.intra_1-5mid.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.intra_1-4.intra_2-6.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.intra_1-4.intra_7-11.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.intra_1-4.intra_8-12.dat 205752 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.intra_1-4.pairs.dat 98742 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.intra_1-4mid.intra_1-4.dat 115458 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.intra_1-4mid.intra_1-4mid.dat 126462 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.intra_1-4mid.intra_1-5.dat 173906 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.intra_1-4mid.intra_1-5mid.dat 89250 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.intra_1-4mid.intra_2-5.dat 133128 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.intra_1-4mid.intra_2-6.dat 140457 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.intra_1-4mid.intra_7-11.dat 144186 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.intra_1-4mid.intra_8-12.dat 201757 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.intra_1-4mid.pairs.dat 0 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.intra_1-5.intra_1-5.dat 279990 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.intra_1-5.pairs.dat 178332 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.intra_1-5mid.intra_1-5.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.intra_1-5mid.intra_1-5mid.dat 176316 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.intra_1-5mid.intra_2-6.dat 276642 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.intra_1-5mid.pairs.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.intra_2-5.intra_1-4.dat 130052 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.intra_2-5.intra_1-5.dat 120876 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.intra_2-5.intra_1-5mid.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.intra_2-5.intra_2-5.dat 107174 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.intra_2-5.intra_2-6.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.intra_2-5.intra_7-11.dat 0 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.intra_2-5.intra_8-12.dat 180472 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.intra_2-5.pairs.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.intra_2-6.intra_1-5.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.intra_2-6.intra_2-6.dat 252877 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.intra_2-6.pairs.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.intra_7-11.intra_1-5.dat 177282 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.intra_7-11.intra_1-5mid.dat 0 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.intra_7-11.intra_2-6.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.intra_7-11.intra_7-11.dat 273869 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.intra_7-11.pairs.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.intra_8-11.intra_1-4.dat 92694 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.intra_8-11.intra_1-4mid.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.intra_8-11.intra_1-5.dat 124824 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.intra_8-11.intra_1-5mid.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.intra_8-11.intra_2-5.dat 0 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.intra_8-11.intra_2-6.dat 133168 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.intra_8-11.intra_7-11.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.intra_8-11.intra_8-11.dat 162237 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.intra_8-11.intra_8-12.dat 191252 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.intra_8-11.pairs.dat 0 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.intra_8-12.intra_1-5.dat 195384 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.intra_8-12.intra_1-5mid.dat 0 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.intra_8-12.intra_2-6.dat 0 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.intra_8-12.intra_7-11.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.intra_8-12.intra_8-12.dat 333542 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.intra_8-12.pairs.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.intra_9-12.intra_1-4.dat 109326 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.intra_9-12.intra_1-4mid.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.intra_9-12.intra_1-5.dat 139146 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.intra_9-12.intra_1-5mid.dat 0 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.intra_9-12.intra_2-5.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.intra_9-12.intra_2-6.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.intra_9-12.intra_7-11.dat 0 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.intra_9-12.intra_8-11.dat 184213 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.intra_9-12.intra_8-12.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.intra_9-12.intra_9-12.dat 236513 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.intra_9-12.pairs.dat 368727 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2.pairs.pairs.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.angles_1-2-3.angles_1-2-3.dat 194791 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.angles_1-2-3.bonds.dat 139523 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.angles_1-2-3.intra_1-4.dat 108199 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.angles_1-2-3.intra_1-4mid.dat 167895 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.angles_1-2-3.intra_1-5.dat 122713 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.angles_1-2-3.intra_1-5mid.dat 98441 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.angles_1-2-3.intra_2-5.dat 146288 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.angles_1-2-3.intra_2-6.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.angles_1-2-3.intra_7-11.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.angles_1-2-3.intra_8-11.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.angles_1-2-3.intra_8-12.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.angles_1-2-3.intra_9-12.dat 218284 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.angles_1-2-3.pairs.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.angles_10-11-12.angles_1-2-3.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.angles_10-11-12.angles_10-11-12.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.angles_10-11-12.angles_2-3-4.dat 221318 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.angles_10-11-12.angles_9-10-11.dat 175480 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.angles_10-11-12.angles_mid.dat 254774 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.angles_10-11-12.bonds.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.angles_10-11-12.intra_1-4.dat 137842 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.angles_10-11-12.intra_1-4mid.dat 0 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.angles_10-11-12.intra_1-5.dat 186345 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.angles_10-11-12.intra_1-5mid.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.angles_10-11-12.intra_2-5.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.angles_10-11-12.intra_2-6.dat 224229 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.angles_10-11-12.intra_7-11.dat 155349 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.angles_10-11-12.intra_8-11.dat 227632 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.angles_10-11-12.intra_8-12.dat 193971 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.angles_10-11-12.intra_9-12.dat 312584 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.angles_10-11-12.pairs.dat 136407 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.angles_2-3-4.angles_1-2-3.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.angles_2-3-4.angles_2-3-4.dat 181999 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.angles_2-3-4.bonds.dat 132963 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.angles_2-3-4.intra_1-4.dat 106067 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.angles_2-3-4.intra_1-4mid.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.angles_2-3-4.intra_1-5.dat 132840 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.angles_2-3-4.intra_1-5mid.dat 119966 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.angles_2-3-4.intra_2-5.dat 142311 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.angles_2-3-4.intra_2-6.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.angles_2-3-4.intra_7-11.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.angles_2-3-4.intra_8-11.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.angles_2-3-4.intra_8-12.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.angles_2-3-4.intra_9-12.dat 199301 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.angles_2-3-4.pairs.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.angles_9-10-11.angles_1-2-3.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.angles_9-10-11.angles_2-3-4.dat 0 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.angles_9-10-11.angles_9-10-11.dat 168961 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.angles_9-10-11.angles_mid.dat 210207 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.angles_9-10-11.bonds.dat 0 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.angles_9-10-11.intra_1-4.dat 131897 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.angles_9-10-11.intra_1-4mid.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.angles_9-10-11.intra_1-5.dat 168797 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.angles_9-10-11.intra_1-5mid.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.angles_9-10-11.intra_2-5.dat 0 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.angles_9-10-11.intra_2-6.dat 156046 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.angles_9-10-11.intra_7-11.dat 147313 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.angles_9-10-11.intra_8-11.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.angles_9-10-11.intra_8-12.dat 154693 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.angles_9-10-11.intra_9-12.dat 242638 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.angles_9-10-11.pairs.dat 131610 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.angles_mid.angles_1-2-3.dat 138621 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.angles_mid.angles_2-3-4.dat 178719 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.angles_mid.angles_mid.dat 211191 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.angles_mid.bonds.dat 126854 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.angles_mid.intra_1-4.dat 158383 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.angles_mid.intra_1-4mid.dat 155062 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.angles_mid.intra_1-5.dat 173184 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.angles_mid.intra_1-5mid.dat 114636 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.angles_mid.intra_2-5.dat 132922 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.angles_mid.intra_2-6.dat 150224 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.angles_mid.intra_7-11.dat 133988 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.angles_mid.intra_8-11.dat 190896 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.angles_mid.intra_8-12.dat 149773 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.angles_mid.intra_9-12.dat 234438 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.angles_mid.pairs.dat 149568 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.bonds.bonds.dat 154816 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.bonds.intra_1-4.dat 150306 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.bonds.intra_1-4mid.dat 215701 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.bonds.intra_1-5.dat 197087 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.bonds.intra_1-5mid.dat 123533 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.bonds.intra_2-5.dat 177776 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.bonds.intra_2-6.dat 188600 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.bonds.intra_7-11.dat 138785 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.bonds.intra_8-11.dat 239563 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.bonds.intra_8-12.dat 166788 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.bonds.intra_9-12.dat 295241 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.bonds.pairs.dat 205211 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_1-2-3-4.angles_1-2-3.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_1-2-3-4.angles_10-11-12.dat 183475 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_1-2-3-4.angles_2-3-4.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_1-2-3-4.angles_9-10-11.dat 210647 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_1-2-3-4.angles_mid.dat 239905 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_1-2-3-4.bonds.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_1-2-3-4.dihedrals_1-2-3-4.dat 120556 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_1-2-3-4.intra_1-4.dat 165483 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_1-2-3-4.intra_1-4mid.dat 163522 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_1-2-3-4.intra_1-5.dat 204523 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_1-2-3-4.intra_1-5mid.dat 166485 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_1-2-3-4.intra_2-5.dat 205314 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_1-2-3-4.intra_2-6.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_1-2-3-4.intra_7-11.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_1-2-3-4.intra_8-11.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_1-2-3-4.intra_8-12.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_1-2-3-4.intra_9-12.dat 344022 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_1-2-3-4.pairs.dat 191151 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_2-3-4-5.angles_1-2-3.dat 0 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_2-3-4-5.angles_10-11-12.dat 171749 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_2-3-4-5.angles_2-3-4.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_2-3-4-5.angles_9-10-11.dat 194274 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_2-3-4-5.angles_mid.dat 231415 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_2-3-4-5.bonds.dat 231554 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_2-3-4-5.dihedrals_1-2-3-4.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_2-3-4-5.dihedrals_2-3-4-5.dat 159861 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_2-3-4-5.intra_1-4.dat 163320 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_2-3-4-5.intra_1-4mid.dat 159944 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_2-3-4-5.intra_1-5.dat 213261 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_2-3-4-5.intra_1-5mid.dat 102787 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_2-3-4-5.intra_2-5.dat 138626 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_2-3-4-5.intra_2-6.dat 0 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_2-3-4-5.intra_7-11.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_2-3-4-5.intra_8-11.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_2-3-4-5.intra_8-12.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_2-3-4-5.intra_9-12.dat 290917 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_2-3-4-5.pairs.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_8-9-10-11.angles_1-2-3.dat 268262 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_8-9-10-11.angles_10-11-12.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_8-9-10-11.angles_2-3-4.dat 186384 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_8-9-10-11.angles_9-10-11.dat 230700 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_8-9-10-11.angles_mid.dat 265518 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_8-9-10-11.bonds.dat 0 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_8-9-10-11.dihedrals_1-2-3-4.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_8-9-10-11.dihedrals_2-3-4-5.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_8-9-10-11.dihedrals_8-9-10-11.dat 286929 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_8-9-10-11.dihedrals_mid.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_8-9-10-11.intra_1-4.dat 192967 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_8-9-10-11.intra_1-4mid.dat 0 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_8-9-10-11.intra_1-5.dat 249028 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_8-9-10-11.intra_1-5mid.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_8-9-10-11.intra_2-5.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_8-9-10-11.intra_2-6.dat 162656 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_8-9-10-11.intra_7-11.dat 122814 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_8-9-10-11.intra_8-11.dat 242727 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_8-9-10-11.intra_8-12.dat 199572 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_8-9-10-11.intra_9-12.dat 341248 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_8-9-10-11.pairs.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_9-10-11-12.angles_1-2-3.dat 251562 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_9-10-11-12.angles_10-11-12.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_9-10-11-12.angles_2-3-4.dat 281029 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_9-10-11-12.angles_9-10-11.dat 272977 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_9-10-11-12.angles_mid.dat 294801 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_9-10-11-12.bonds.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_9-10-11-12.dihedrals_1-2-3-4.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_9-10-11-12.dihedrals_2-3-4-5.dat 357731 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_9-10-11-12.dihedrals_8-9-10-11.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_9-10-11-12.dihedrals_9-10-11-12.dat 318044 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_9-10-11-12.dihedrals_mid.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_9-10-11-12.intra_1-4.dat 233333 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_9-10-11-12.intra_1-4mid.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_9-10-11-12.intra_1-5.dat 276239 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_9-10-11-12.intra_1-5mid.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_9-10-11-12.intra_2-5.dat 0 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_9-10-11-12.intra_2-6.dat 297100 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_9-10-11-12.intra_7-11.dat 214632 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_9-10-11-12.intra_8-11.dat 240896 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_9-10-11-12.intra_8-12.dat 179337 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_9-10-11-12.intra_9-12.dat 455462 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_9-10-11-12.pairs.dat 142557 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_mid.angles_1-2-3.dat 195981 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_mid.angles_10-11-12.dat 166419 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_mid.angles_2-3-4.dat 201927 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_mid.angles_9-10-11.dat 251948 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_mid.angles_mid.dat 252030 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_mid.bonds.dat 229477 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_mid.dihedrals_1-2-3-4.dat 230848 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_mid.dihedrals_2-3-4-5.dat 310212 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_mid.dihedrals_mid.dat 159572 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_mid.intra_1-4.dat 227185 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_mid.intra_1-4mid.dat 213569 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_mid.intra_1-5.dat 276015 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_mid.intra_1-5mid.dat 156702 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_mid.intra_2-5.dat 207132 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_mid.intra_2-6.dat 227141 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_mid.intra_7-11.dat 174907 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_mid.intra_8-11.dat 254160 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_mid.intra_8-12.dat 188930 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_mid.intra_9-12.dat 339244 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.dihedrals_mid.pairs.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.intra_1-4.intra_1-4.dat 127797 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.intra_1-4.intra_1-5.dat 128781 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.intra_1-4.intra_1-5mid.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.intra_1-4.intra_2-6.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.intra_1-4.intra_7-11.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.intra_1-4.intra_8-12.dat 202991 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.intra_1-4.pairs.dat 96391 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.intra_1-4mid.intra_1-4.dat 112709 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.intra_1-4mid.intra_1-4mid.dat 123451 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.intra_1-4mid.intra_1-5.dat 172569 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.intra_1-4mid.intra_1-5mid.dat 87125 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.intra_1-4mid.intra_2-5.dat 131651 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.intra_1-4mid.intra_2-6.dat 138908 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.intra_1-4mid.intra_7-11.dat 140753 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.intra_1-4mid.intra_8-12.dat 201064 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.intra_1-4mid.pairs.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.intra_1-5.intra_1-5.dat 276504 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.intra_1-5.pairs.dat 174086 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.intra_1-5mid.intra_1-5.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.intra_1-5mid.intra_1-5mid.dat 172118 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.intra_1-5mid.intra_2-6.dat 275274 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.intra_1-5mid.pairs.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.intra_2-5.intra_1-4.dat 130052 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.intra_2-5.intra_1-5.dat 117998 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.intra_2-5.intra_1-5mid.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.intra_2-5.intra_2-5.dat 107174 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.intra_2-5.intra_2-6.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.intra_2-5.intra_7-11.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.intra_2-5.intra_8-12.dat 178227 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.intra_2-5.pairs.dat 0 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.intra_2-6.intra_1-5.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.intra_2-6.intra_2-6.dat 251412 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.intra_2-6.pairs.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.intra_7-11.intra_1-5.dat 173061 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.intra_7-11.intra_1-5mid.dat 0 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.intra_7-11.intra_2-6.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.intra_7-11.intra_7-11.dat 272445 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.intra_7-11.pairs.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.intra_8-11.intra_1-4.dat 90487 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.intra_8-11.intra_1-4mid.dat 0 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.intra_8-11.intra_1-5.dat 121852 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.intra_8-11.intra_1-5mid.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.intra_8-11.intra_2-5.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.intra_8-11.intra_2-6.dat 133168 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.intra_8-11.intra_7-11.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.intra_8-11.intra_8-11.dat 162237 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.intra_8-11.intra_8-12.dat 189010 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.intra_8-11.pairs.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.intra_8-12.intra_1-5.dat 190732 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.intra_8-12.intra_1-5mid.dat 0 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.intra_8-12.intra_2-6.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.intra_8-12.intra_7-11.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.intra_8-12.intra_8-12.dat 330009 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.intra_8-12.pairs.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.intra_9-12.intra_1-4.dat 106723 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.intra_9-12.intra_1-4mid.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.intra_9-12.intra_1-5.dat 135833 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.intra_9-12.intra_1-5mid.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.intra_9-12.intra_2-5.dat 0 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.intra_9-12.intra_2-6.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.intra_9-12.intra_7-11.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.intra_9-12.intra_8-11.dat 184213 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.intra_9-12.intra_8-12.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.intra_9-12.intra_9-12.dat 233864 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.intra_9-12.pairs.dat 367524 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M2cnt.pairs.pairs.dat 11703 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.angles_1-2-3.angles_1-2-3.dat 199340 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.angles_1-2-3.bonds.dat 139523 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.angles_1-2-3.intra_1-4.dat 110836 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.angles_1-2-3.intra_1-4mid.dat 167895 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.angles_1-2-3.intra_1-5.dat 125675 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.angles_1-2-3.intra_1-5mid.dat 100761 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.angles_1-2-3.intra_2-5.dat 149422 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.angles_1-2-3.intra_2-6.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.angles_1-2-3.intra_7-11.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.angles_1-2-3.intra_8-11.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.angles_1-2-3.intra_8-12.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.angles_1-2-3.intra_9-12.dat 221419 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.angles_1-2-3.pairs.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.angles_10-11-12.angles_1-2-3.dat 13608 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.angles_10-11-12.angles_10-11-12.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.angles_10-11-12.angles_2-3-4.dat 226706 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.angles_10-11-12.angles_9-10-11.dat 179727 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.angles_10-11-12.angles_mid.dat 260715 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.angles_10-11-12.bonds.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.angles_10-11-12.intra_1-4.dat 140928 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.angles_10-11-12.intra_1-4mid.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.angles_10-11-12.intra_1-5.dat 188767 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.angles_10-11-12.intra_1-5mid.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.angles_10-11-12.intra_2-5.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.angles_10-11-12.intra_2-6.dat 229491 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.angles_10-11-12.intra_7-11.dat 159132 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.angles_10-11-12.intra_8-11.dat 227632 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.angles_10-11-12.intra_8-12.dat 193971 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.angles_10-11-12.intra_9-12.dat 316707 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.angles_10-11-12.pairs.dat 139634 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.angles_2-3-4.angles_1-2-3.dat 11204 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.angles_2-3-4.angles_2-3-4.dat 185808 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.angles_2-3-4.bonds.dat 132963 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.angles_2-3-4.intra_1-4.dat 108652 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.angles_2-3-4.intra_1-4mid.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.angles_2-3-4.intra_1-5.dat 136033 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.angles_2-3-4.intra_1-5mid.dat 119966 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.angles_2-3-4.intra_2-5.dat 142311 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.angles_2-3-4.intra_2-6.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.angles_2-3-4.intra_7-11.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.angles_2-3-4.intra_8-11.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.angles_2-3-4.intra_8-12.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.angles_2-3-4.intra_9-12.dat 202484 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.angles_2-3-4.pairs.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.angles_9-10-11.angles_1-2-3.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.angles_9-10-11.angles_2-3-4.dat 13965 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.angles_9-10-11.angles_9-10-11.dat 173049 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.angles_9-10-11.angles_mid.dat 214587 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.angles_9-10-11.bonds.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.angles_9-10-11.intra_1-4.dat 135086 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.angles_9-10-11.intra_1-4mid.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.angles_9-10-11.intra_1-5.dat 172679 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.angles_9-10-11.intra_1-5mid.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.angles_9-10-11.intra_2-5.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.angles_9-10-11.intra_2-6.dat 156046 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.angles_9-10-11.intra_7-11.dat 147313 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.angles_9-10-11.intra_8-11.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.angles_9-10-11.intra_8-12.dat 154693 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.angles_9-10-11.intra_9-12.dat 246432 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.angles_9-10-11.pairs.dat 134820 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.angles_mid.angles_1-2-3.dat 141984 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.angles_mid.angles_2-3-4.dat 187904 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.angles_mid.angles_mid.dat 215519 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.angles_mid.bonds.dat 129927 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.angles_mid.intra_1-4.dat 159714 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.angles_mid.intra_1-4mid.dat 157485 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.angles_mid.intra_1-5.dat 174918 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.angles_mid.intra_1-5mid.dat 116031 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.angles_mid.intra_2-5.dat 135299 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.angles_mid.intra_2-6.dat 152376 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.angles_mid.intra_7-11.dat 135798 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.angles_mid.intra_8-11.dat 193212 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.angles_mid.intra_8-12.dat 153415 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.angles_mid.intra_9-12.dat 236668 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.angles_mid.pairs.dat 158053 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.bonds.bonds.dat 154818 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.bonds.intra_1-4.dat 150320 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.bonds.intra_1-4mid.dat 215725 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.bonds.intra_1-5.dat 197586 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.bonds.intra_1-5mid.dat 123569 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.bonds.intra_2-5.dat 178254 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.bonds.intra_2-6.dat 189141 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.bonds.intra_7-11.dat 138789 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.bonds.intra_8-11.dat 239898 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.bonds.intra_8-12.dat 166788 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.bonds.intra_9-12.dat 295281 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.bonds.pairs.dat 210168 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_1-2-3-4.angles_1-2-3.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_1-2-3-4.angles_10-11-12.dat 187908 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_1-2-3-4.angles_2-3-4.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_1-2-3-4.angles_9-10-11.dat 211036 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_1-2-3-4.angles_mid.dat 245756 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_1-2-3-4.bonds.dat 21408 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_1-2-3-4.dihedrals_1-2-3-4.dat 120572 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_1-2-3-4.intra_1-4.dat 166516 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_1-2-3-4.intra_1-4mid.dat 163535 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_1-2-3-4.intra_1-5.dat 207929 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_1-2-3-4.intra_1-5mid.dat 170522 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_1-2-3-4.intra_2-5.dat 210290 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_1-2-3-4.intra_2-6.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_1-2-3-4.intra_7-11.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_1-2-3-4.intra_8-11.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_1-2-3-4.intra_8-12.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_1-2-3-4.intra_9-12.dat 349581 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_1-2-3-4.pairs.dat 191190 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_2-3-4-5.angles_1-2-3.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_2-3-4-5.angles_10-11-12.dat 175938 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_2-3-4-5.angles_2-3-4.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_2-3-4-5.angles_9-10-11.dat 196183 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_2-3-4-5.angles_mid.dat 237044 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_2-3-4-5.bonds.dat 237196 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_2-3-4-5.dihedrals_1-2-3-4.dat 15540 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_2-3-4-5.dihedrals_2-3-4-5.dat 163755 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_2-3-4-5.intra_1-4.dat 166521 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_2-3-4-5.intra_1-4mid.dat 159947 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_2-3-4-5.intra_1-5.dat 218052 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_2-3-4-5.intra_1-5mid.dat 102787 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_2-3-4-5.intra_2-5.dat 138626 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_2-3-4-5.intra_2-6.dat 0 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_2-3-4-5.intra_7-11.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_2-3-4-5.intra_8-11.dat 0 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_2-3-4-5.intra_8-12.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_2-3-4-5.intra_9-12.dat 295523 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_2-3-4-5.pairs.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_8-9-10-11.angles_1-2-3.dat 268357 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_8-9-10-11.angles_10-11-12.dat 0 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_8-9-10-11.angles_2-3-4.dat 190890 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_8-9-10-11.angles_9-10-11.dat 232777 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_8-9-10-11.angles_mid.dat 271991 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_8-9-10-11.bonds.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_8-9-10-11.dihedrals_1-2-3-4.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_8-9-10-11.dihedrals_2-3-4-5.dat 20138 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_8-9-10-11.dihedrals_8-9-10-11.dat 292215 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_8-9-10-11.dihedrals_mid.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_8-9-10-11.intra_1-4.dat 196663 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_8-9-10-11.intra_1-4mid.dat 0 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_8-9-10-11.intra_1-5.dat 254588 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_8-9-10-11.intra_1-5mid.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_8-9-10-11.intra_2-5.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_8-9-10-11.intra_2-6.dat 162656 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_8-9-10-11.intra_7-11.dat 122833 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_8-9-10-11.intra_8-11.dat 242727 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_8-9-10-11.intra_8-12.dat 204439 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_8-9-10-11.intra_9-12.dat 346697 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_8-9-10-11.pairs.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_9-10-11-12.angles_1-2-3.dat 257586 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_9-10-11-12.angles_10-11-12.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_9-10-11-12.angles_2-3-4.dat 287700 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_9-10-11-12.angles_9-10-11.dat 273662 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_9-10-11-12.angles_mid.dat 301983 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_9-10-11-12.bonds.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_9-10-11-12.dihedrals_1-2-3-4.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_9-10-11-12.dihedrals_2-3-4-5.dat 366443 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_9-10-11-12.dihedrals_8-9-10-11.dat 24355 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_9-10-11-12.dihedrals_9-10-11-12.dat 318555 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_9-10-11-12.dihedrals_mid.dat 0 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_9-10-11-12.intra_1-4.dat 234160 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_9-10-11-12.intra_1-4mid.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_9-10-11-12.intra_1-5.dat 279599 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_9-10-11-12.intra_1-5mid.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_9-10-11-12.intra_2-5.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_9-10-11-12.intra_2-6.dat 304326 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_9-10-11-12.intra_7-11.dat 219863 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_9-10-11-12.intra_8-11.dat 240899 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_9-10-11-12.intra_8-12.dat 179381 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_9-10-11-12.intra_9-12.dat 462028 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_9-10-11-12.pairs.dat 146024 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_mid.angles_1-2-3.dat 200739 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_mid.angles_10-11-12.dat 166681 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_mid.angles_2-3-4.dat 202279 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_mid.angles_9-10-11.dat 254669 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_mid.angles_mid.dat 258177 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_mid.bonds.dat 229865 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_mid.dihedrals_1-2-3-4.dat 235079 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_mid.dihedrals_2-3-4-5.dat 324663 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_mid.dihedrals_mid.dat 160851 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_mid.intra_1-4.dat 230285 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_mid.intra_1-4mid.dat 218485 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_mid.intra_1-5.dat 279421 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_mid.intra_1-5mid.dat 159914 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_mid.intra_2-5.dat 210219 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_mid.intra_2-6.dat 230103 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_mid.intra_7-11.dat 178535 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_mid.intra_8-11.dat 259837 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_mid.intra_8-12.dat 190045 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_mid.intra_9-12.dat 342734 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.dihedrals_mid.pairs.dat 12119 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.intra_1-4.intra_1-4.dat 127797 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.intra_1-4.intra_1-5.dat 131922 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.intra_1-4.intra_1-5mid.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.intra_1-4.intra_2-6.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.intra_1-4.intra_7-11.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.intra_1-4.intra_8-12.dat 205752 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.intra_1-4.pairs.dat 98742 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.intra_1-4mid.intra_1-4.dat 121541 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.intra_1-4mid.intra_1-4mid.dat 126462 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.intra_1-4mid.intra_1-5.dat 173906 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.intra_1-4mid.intra_1-5mid.dat 89250 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.intra_1-4mid.intra_2-5.dat 133128 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.intra_1-4mid.intra_2-6.dat 140457 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.intra_1-4mid.intra_7-11.dat 144186 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.intra_1-4mid.intra_8-12.dat 201757 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.intra_1-4mid.pairs.dat 13636 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.intra_1-5.intra_1-5.dat 279990 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.intra_1-5.pairs.dat 178332 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.intra_1-5mid.intra_1-5.dat 13501 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.intra_1-5mid.intra_1-5mid.dat 176316 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.intra_1-5mid.intra_2-6.dat 276642 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.intra_1-5mid.pairs.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.intra_2-5.intra_1-4.dat 130052 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.intra_2-5.intra_1-5.dat 120876 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.intra_2-5.intra_1-5mid.dat 10117 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.intra_2-5.intra_2-5.dat 107174 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.intra_2-5.intra_2-6.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.intra_2-5.intra_7-11.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.intra_2-5.intra_8-12.dat 180472 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.intra_2-5.pairs.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.intra_2-6.intra_1-5.dat 12506 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.intra_2-6.intra_2-6.dat 252877 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.intra_2-6.pairs.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.intra_7-11.intra_1-5.dat 177282 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.intra_7-11.intra_1-5mid.dat 0 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.intra_7-11.intra_2-6.dat 15265 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.intra_7-11.intra_7-11.dat 273869 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.intra_7-11.pairs.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.intra_8-11.intra_1-4.dat 92694 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.intra_8-11.intra_1-4mid.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.intra_8-11.intra_1-5.dat 124824 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.intra_8-11.intra_1-5mid.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.intra_8-11.intra_2-5.dat 0 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.intra_8-11.intra_2-6.dat 133168 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.intra_8-11.intra_7-11.dat 11240 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.intra_8-11.intra_8-11.dat 162237 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.intra_8-11.intra_8-12.dat 191252 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.intra_8-11.pairs.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.intra_8-12.intra_1-5.dat 195384 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.intra_8-12.intra_1-5mid.dat 0 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.intra_8-12.intra_2-6.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.intra_8-12.intra_7-11.dat 16603 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.intra_8-12.intra_8-12.dat 333542 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.intra_8-12.pairs.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.intra_9-12.intra_1-4.dat 109326 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.intra_9-12.intra_1-4mid.dat 0 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.intra_9-12.intra_1-5.dat 139146 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.intra_9-12.intra_1-5mid.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.intra_9-12.intra_2-5.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.intra_9-12.intra_2-6.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.intra_9-12.intra_7-11.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.intra_9-12.intra_8-11.dat 184213 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.intra_9-12.intra_8-12.dat 12486 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.intra_9-12.intra_9-12.dat 236513 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.intra_9-12.pairs.dat 376679 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/M3.pairs.pairs.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.angles_1-2-3.angles_1-2-3.dat 194791 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.angles_1-2-3.bonds.dat 139523 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.angles_1-2-3.intra_1-4.dat 108199 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.angles_1-2-3.intra_1-4mid.dat 167895 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.angles_1-2-3.intra_1-5.dat 122713 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.angles_1-2-3.intra_1-5mid.dat 98441 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.angles_1-2-3.intra_2-5.dat 146288 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.angles_1-2-3.intra_2-6.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.angles_1-2-3.intra_7-11.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.angles_1-2-3.intra_8-11.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.angles_1-2-3.intra_8-12.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.angles_1-2-3.intra_9-12.dat 218284 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.angles_1-2-3.pairs.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.angles_10-11-12.angles_1-2-3.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.angles_10-11-12.angles_10-11-12.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.angles_10-11-12.angles_2-3-4.dat 221318 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.angles_10-11-12.angles_9-10-11.dat 175480 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.angles_10-11-12.angles_mid.dat 254774 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.angles_10-11-12.bonds.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.angles_10-11-12.intra_1-4.dat 137842 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.angles_10-11-12.intra_1-4mid.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.angles_10-11-12.intra_1-5.dat 186345 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.angles_10-11-12.intra_1-5mid.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.angles_10-11-12.intra_2-5.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.angles_10-11-12.intra_2-6.dat 224229 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.angles_10-11-12.intra_7-11.dat 155349 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.angles_10-11-12.intra_8-11.dat 227632 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.angles_10-11-12.intra_8-12.dat 193971 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.angles_10-11-12.intra_9-12.dat 312584 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.angles_10-11-12.pairs.dat 136407 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.angles_2-3-4.angles_1-2-3.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.angles_2-3-4.angles_2-3-4.dat 181999 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.angles_2-3-4.bonds.dat 132963 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.angles_2-3-4.intra_1-4.dat 106067 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.angles_2-3-4.intra_1-4mid.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.angles_2-3-4.intra_1-5.dat 132840 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.angles_2-3-4.intra_1-5mid.dat 119966 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.angles_2-3-4.intra_2-5.dat 142311 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.angles_2-3-4.intra_2-6.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.angles_2-3-4.intra_7-11.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.angles_2-3-4.intra_8-11.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.angles_2-3-4.intra_8-12.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.angles_2-3-4.intra_9-12.dat 199301 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.angles_2-3-4.pairs.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.angles_9-10-11.angles_1-2-3.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.angles_9-10-11.angles_2-3-4.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.angles_9-10-11.angles_9-10-11.dat 168961 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.angles_9-10-11.angles_mid.dat 210207 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.angles_9-10-11.bonds.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.angles_9-10-11.intra_1-4.dat 131897 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.angles_9-10-11.intra_1-4mid.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.angles_9-10-11.intra_1-5.dat 168797 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.angles_9-10-11.intra_1-5mid.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.angles_9-10-11.intra_2-5.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.angles_9-10-11.intra_2-6.dat 156046 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.angles_9-10-11.intra_7-11.dat 147313 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.angles_9-10-11.intra_8-11.dat 0 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.angles_9-10-11.intra_8-12.dat 154693 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.angles_9-10-11.intra_9-12.dat 242638 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.angles_9-10-11.pairs.dat 131610 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.angles_mid.angles_1-2-3.dat 138621 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.angles_mid.angles_2-3-4.dat 172856 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.angles_mid.angles_mid.dat 211191 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.angles_mid.bonds.dat 126854 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.angles_mid.intra_1-4.dat 158383 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.angles_mid.intra_1-4mid.dat 155062 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.angles_mid.intra_1-5.dat 173184 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.angles_mid.intra_1-5mid.dat 114636 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.angles_mid.intra_2-5.dat 132922 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.angles_mid.intra_2-6.dat 150224 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.angles_mid.intra_7-11.dat 133988 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.angles_mid.intra_8-11.dat 190896 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.angles_mid.intra_8-12.dat 149773 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.angles_mid.intra_9-12.dat 234438 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.angles_mid.pairs.dat 143500 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.bonds.bonds.dat 154816 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.bonds.intra_1-4.dat 150306 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.bonds.intra_1-4mid.dat 215701 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.bonds.intra_1-5.dat 197087 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.bonds.intra_1-5mid.dat 123533 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.bonds.intra_2-5.dat 177776 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.bonds.intra_2-6.dat 188600 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.bonds.intra_7-11.dat 138785 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.bonds.intra_8-11.dat 239563 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.bonds.intra_8-12.dat 166788 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.bonds.intra_9-12.dat 295241 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.bonds.pairs.dat 205211 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_1-2-3-4.angles_1-2-3.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_1-2-3-4.angles_10-11-12.dat 183475 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_1-2-3-4.angles_2-3-4.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_1-2-3-4.angles_9-10-11.dat 210647 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_1-2-3-4.angles_mid.dat 239905 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_1-2-3-4.bonds.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_1-2-3-4.dihedrals_1-2-3-4.dat 120556 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_1-2-3-4.intra_1-4.dat 165483 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_1-2-3-4.intra_1-4mid.dat 163522 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_1-2-3-4.intra_1-5.dat 204523 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_1-2-3-4.intra_1-5mid.dat 166485 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_1-2-3-4.intra_2-5.dat 205314 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_1-2-3-4.intra_2-6.dat 0 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_1-2-3-4.intra_7-11.dat 0 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_1-2-3-4.intra_8-11.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_1-2-3-4.intra_8-12.dat 0 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_1-2-3-4.intra_9-12.dat 344022 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_1-2-3-4.pairs.dat 191151 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_2-3-4-5.angles_1-2-3.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_2-3-4-5.angles_10-11-12.dat 171749 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_2-3-4-5.angles_2-3-4.dat 0 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_2-3-4-5.angles_9-10-11.dat 194274 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_2-3-4-5.angles_mid.dat 231415 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_2-3-4-5.bonds.dat 231554 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_2-3-4-5.dihedrals_1-2-3-4.dat 0 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_2-3-4-5.dihedrals_2-3-4-5.dat 159861 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_2-3-4-5.intra_1-4.dat 163320 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_2-3-4-5.intra_1-4mid.dat 159944 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_2-3-4-5.intra_1-5.dat 213261 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_2-3-4-5.intra_1-5mid.dat 102787 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_2-3-4-5.intra_2-5.dat 138626 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_2-3-4-5.intra_2-6.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_2-3-4-5.intra_7-11.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_2-3-4-5.intra_8-11.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_2-3-4-5.intra_8-12.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_2-3-4-5.intra_9-12.dat 290917 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_2-3-4-5.pairs.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_8-9-10-11.angles_1-2-3.dat 268262 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_8-9-10-11.angles_10-11-12.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_8-9-10-11.angles_2-3-4.dat 186384 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_8-9-10-11.angles_9-10-11.dat 230700 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_8-9-10-11.angles_mid.dat 265518 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_8-9-10-11.bonds.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_8-9-10-11.dihedrals_1-2-3-4.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_8-9-10-11.dihedrals_2-3-4-5.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_8-9-10-11.dihedrals_8-9-10-11.dat 286929 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_8-9-10-11.dihedrals_mid.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_8-9-10-11.intra_1-4.dat 192967 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_8-9-10-11.intra_1-4mid.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_8-9-10-11.intra_1-5.dat 249028 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_8-9-10-11.intra_1-5mid.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_8-9-10-11.intra_2-5.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_8-9-10-11.intra_2-6.dat 162656 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_8-9-10-11.intra_7-11.dat 122814 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_8-9-10-11.intra_8-11.dat 242727 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_8-9-10-11.intra_8-12.dat 199572 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_8-9-10-11.intra_9-12.dat 341248 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_8-9-10-11.pairs.dat 0 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_9-10-11-12.angles_1-2-3.dat 251562 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_9-10-11-12.angles_10-11-12.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_9-10-11-12.angles_2-3-4.dat 281029 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_9-10-11-12.angles_9-10-11.dat 272977 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_9-10-11-12.angles_mid.dat 294801 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_9-10-11-12.bonds.dat 0 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_9-10-11-12.dihedrals_1-2-3-4.dat 0 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_9-10-11-12.dihedrals_2-3-4-5.dat 357731 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_9-10-11-12.dihedrals_8-9-10-11.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_9-10-11-12.dihedrals_9-10-11-12.dat 318044 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_9-10-11-12.dihedrals_mid.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_9-10-11-12.intra_1-4.dat 233333 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_9-10-11-12.intra_1-4mid.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_9-10-11-12.intra_1-5.dat 276239 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_9-10-11-12.intra_1-5mid.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_9-10-11-12.intra_2-5.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_9-10-11-12.intra_2-6.dat 297100 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_9-10-11-12.intra_7-11.dat 214632 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_9-10-11-12.intra_8-11.dat 240896 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_9-10-11-12.intra_8-12.dat 179337 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_9-10-11-12.intra_9-12.dat 455462 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_9-10-11-12.pairs.dat 142557 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_mid.angles_1-2-3.dat 195981 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_mid.angles_10-11-12.dat 166419 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_mid.angles_2-3-4.dat 201927 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_mid.angles_9-10-11.dat 251948 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_mid.angles_mid.dat 252030 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_mid.bonds.dat 229477 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_mid.dihedrals_1-2-3-4.dat 230848 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_mid.dihedrals_2-3-4-5.dat 302340 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_mid.dihedrals_mid.dat 159572 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_mid.intra_1-4.dat 227185 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_mid.intra_1-4mid.dat 213569 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_mid.intra_1-5.dat 276015 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_mid.intra_1-5mid.dat 156702 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_mid.intra_2-5.dat 207132 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_mid.intra_2-6.dat 227141 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_mid.intra_7-11.dat 174907 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_mid.intra_8-11.dat 254160 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_mid.intra_8-12.dat 188930 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_mid.intra_9-12.dat 339244 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.dihedrals_mid.pairs.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.intra_1-4.intra_1-4.dat 127797 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.intra_1-4.intra_1-5.dat 128781 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.intra_1-4.intra_1-5mid.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.intra_1-4.intra_2-6.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.intra_1-4.intra_7-11.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.intra_1-4.intra_8-12.dat 202991 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.intra_1-4.pairs.dat 96391 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.intra_1-4mid.intra_1-4.dat 107912 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.intra_1-4mid.intra_1-4mid.dat 123451 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.intra_1-4mid.intra_1-5.dat 172569 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.intra_1-4mid.intra_1-5mid.dat 87125 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.intra_1-4mid.intra_2-5.dat 131651 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.intra_1-4mid.intra_2-6.dat 138908 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.intra_1-4mid.intra_7-11.dat 140753 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.intra_1-4mid.intra_8-12.dat 201064 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.intra_1-4mid.pairs.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.intra_1-5.intra_1-5.dat 276504 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.intra_1-5.pairs.dat 174086 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.intra_1-5mid.intra_1-5.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.intra_1-5mid.intra_1-5mid.dat 172118 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.intra_1-5mid.intra_2-6.dat 275274 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.intra_1-5mid.pairs.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.intra_2-5.intra_1-4.dat 130052 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.intra_2-5.intra_1-5.dat 117998 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.intra_2-5.intra_1-5mid.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.intra_2-5.intra_2-5.dat 107174 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.intra_2-5.intra_2-6.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.intra_2-5.intra_7-11.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.intra_2-5.intra_8-12.dat 178227 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.intra_2-5.pairs.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.intra_2-6.intra_1-5.dat 0 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.intra_2-6.intra_2-6.dat 251412 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.intra_2-6.pairs.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.intra_7-11.intra_1-5.dat 173061 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.intra_7-11.intra_1-5mid.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.intra_7-11.intra_2-6.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.intra_7-11.intra_7-11.dat 272445 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.intra_7-11.pairs.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.intra_8-11.intra_1-4.dat 90487 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.intra_8-11.intra_1-4mid.dat 0 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.intra_8-11.intra_1-5.dat 121852 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.intra_8-11.intra_1-5mid.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.intra_8-11.intra_2-5.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.intra_8-11.intra_2-6.dat 133168 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.intra_8-11.intra_7-11.dat 0 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.intra_8-11.intra_8-11.dat 162237 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.intra_8-11.intra_8-12.dat 189010 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.intra_8-11.pairs.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.intra_8-12.intra_1-5.dat 190732 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.intra_8-12.intra_1-5mid.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.intra_8-12.intra_2-6.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.intra_8-12.intra_7-11.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.intra_8-12.intra_8-12.dat 330009 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.intra_8-12.pairs.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.intra_9-12.intra_1-4.dat 106723 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.intra_9-12.intra_1-4mid.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.intra_9-12.intra_1-5.dat 135833 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.intra_9-12.intra_1-5mid.dat 0 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.intra_9-12.intra_2-5.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.intra_9-12.intra_2-6.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.intra_9-12.intra_7-11.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.intra_9-12.intra_8-11.dat 184213 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.intra_9-12.intra_8-12.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.intra_9-12.intra_9-12.dat 233864 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.intra_9-12.pairs.dat 357930 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Mcnt.pairs.pairs.dat 3787 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Protein_A.itp 33285 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/S.dat 33291 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/S_CONST.dat 19405169 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/T.dat 19426125 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/T2.dat 19597417 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/T3.dat 18974370 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/Tcnt.dat 1860 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_forces.Angle.total.angles_1-2-3.dat 2511 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_forces.Angle.total.angles_10-11-12.dat 1736 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_forces.Angle.total.angles_2-3-4.dat 1984 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_forces.Angle.total.angles_9-10-11.dat 1612 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_forces.Angle.total.angles_mid.dat 2139 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_forces.BondStretch.total.bonds.dat 2666 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_forces.Dihedral.total.dihedrals_1-2-3-4.dat 2325 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_forces.Dihedral.total.dihedrals_2-3-4-5.dat 2728 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_forces.Dihedral.total.dihedrals_8-9-10-11.dat 3503 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_forces.Dihedral.total.dihedrals_9-10-11-12.dat 2108 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_forces.Dihedral.total.dihedrals_mid.dat 1860 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_forces.Pair_Interaction.total.intra_1-4.dat 1457 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_forces.Pair_Interaction.total.intra_1-4mid.dat 2604 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_forces.Pair_Interaction.total.intra_1-5.dat 2170 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_forces.Pair_Interaction.total.intra_1-5mid.dat 1643 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_forces.Pair_Interaction.total.intra_2-5.dat 2356 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_forces.Pair_Interaction.total.intra_2-6.dat 2449 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_forces.Pair_Interaction.total.intra_7-11.dat 1829 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_forces.Pair_Interaction.total.intra_8-11.dat 3038 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_forces.Pair_Interaction.total.intra_8-12.dat 2108 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_forces.Pair_Interaction.total.intra_9-12.dat 2449 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_forces.Pair_Interaction.total.pairs.dat 1860 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_1-2-3.angles_1-2-3.dat 1860 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_1-2-3.angles_10-11-12.dat 1860 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_1-2-3.angles_2-3-4.dat 1860 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_1-2-3.angles_9-10-11.dat 1860 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_1-2-3.angles_mid.dat 1860 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_1-2-3.bonds.dat 1860 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_1-2-3.dihedrals_1-2-3-4.dat 1860 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_1-2-3.dihedrals_2-3-4-5.dat 1860 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_1-2-3.dihedrals_8-9-10-11.dat 1860 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_1-2-3.dihedrals_9-10-11-12.dat 1860 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_1-2-3.dihedrals_mid.dat 1860 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_1-2-3.intra_1-4.dat 1860 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_1-2-3.intra_1-4mid.dat 1860 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_1-2-3.intra_1-5.dat 1860 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_1-2-3.intra_1-5mid.dat 1860 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_1-2-3.intra_2-5.dat 1860 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_1-2-3.intra_2-6.dat 1860 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_1-2-3.intra_7-11.dat 1860 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_1-2-3.intra_8-11.dat 1860 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_1-2-3.intra_8-12.dat 1860 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_1-2-3.intra_9-12.dat 1860 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_1-2-3.pairs.dat 2511 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_10-11-12.angles_1-2-3.dat 2511 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_10-11-12.angles_10-11-12.dat 2511 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_10-11-12.angles_2-3-4.dat 2511 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_10-11-12.angles_9-10-11.dat 2511 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_10-11-12.angles_mid.dat 2511 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_10-11-12.bonds.dat 2511 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_10-11-12.dihedrals_1-2-3-4.dat 2511 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_10-11-12.dihedrals_2-3-4-5.dat 2511 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_10-11-12.dihedrals_8-9-10-11.dat 2511 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_10-11-12.dihedrals_9-10-11-12.dat 2511 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_10-11-12.dihedrals_mid.dat 2511 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_10-11-12.intra_1-4.dat 2511 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_10-11-12.intra_1-4mid.dat 2511 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_10-11-12.intra_1-5.dat 2511 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_10-11-12.intra_1-5mid.dat 2511 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_10-11-12.intra_2-5.dat 2511 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_10-11-12.intra_2-6.dat 2511 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_10-11-12.intra_7-11.dat 2511 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_10-11-12.intra_8-11.dat 2511 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_10-11-12.intra_8-12.dat 2511 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_10-11-12.intra_9-12.dat 2511 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_10-11-12.pairs.dat 1736 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_2-3-4.angles_1-2-3.dat 1736 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_2-3-4.angles_10-11-12.dat 1736 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_2-3-4.angles_2-3-4.dat 1736 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_2-3-4.angles_9-10-11.dat 1736 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_2-3-4.angles_mid.dat 1736 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_2-3-4.bonds.dat 1736 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_2-3-4.dihedrals_1-2-3-4.dat 1736 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_2-3-4.dihedrals_2-3-4-5.dat 1736 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_2-3-4.dihedrals_8-9-10-11.dat 1736 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_2-3-4.dihedrals_9-10-11-12.dat 1736 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_2-3-4.dihedrals_mid.dat 1736 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_2-3-4.intra_1-4.dat 1736 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_2-3-4.intra_1-4mid.dat 1736 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_2-3-4.intra_1-5.dat 1736 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_2-3-4.intra_1-5mid.dat 1736 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_2-3-4.intra_2-5.dat 1736 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_2-3-4.intra_2-6.dat 1736 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_2-3-4.intra_7-11.dat 1736 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_2-3-4.intra_8-11.dat 1736 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_2-3-4.intra_8-12.dat 1736 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_2-3-4.intra_9-12.dat 1736 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_2-3-4.pairs.dat 1984 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_9-10-11.angles_1-2-3.dat 1984 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_9-10-11.angles_10-11-12.dat 1984 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_9-10-11.angles_2-3-4.dat 1984 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_9-10-11.angles_9-10-11.dat 1984 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_9-10-11.angles_mid.dat 1984 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_9-10-11.bonds.dat 1984 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_9-10-11.dihedrals_1-2-3-4.dat 1984 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_9-10-11.dihedrals_2-3-4-5.dat 1984 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_9-10-11.dihedrals_8-9-10-11.dat 1984 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_9-10-11.dihedrals_9-10-11-12.dat 1984 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_9-10-11.dihedrals_mid.dat 1984 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_9-10-11.intra_1-4.dat 1984 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_9-10-11.intra_1-4mid.dat 1984 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_9-10-11.intra_1-5.dat 1984 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_9-10-11.intra_1-5mid.dat 1984 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_9-10-11.intra_2-5.dat 1984 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_9-10-11.intra_2-6.dat 1984 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_9-10-11.intra_7-11.dat 1984 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_9-10-11.intra_8-11.dat 1984 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_9-10-11.intra_8-12.dat 1984 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_9-10-11.intra_9-12.dat 1984 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_9-10-11.pairs.dat 1612 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_mid.angles_1-2-3.dat 1612 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_mid.angles_10-11-12.dat 1612 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_mid.angles_2-3-4.dat 1612 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_mid.angles_9-10-11.dat 1612 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_mid.angles_mid.dat 1612 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_mid.bonds.dat 1612 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_mid.dihedrals_1-2-3-4.dat 1612 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_mid.dihedrals_2-3-4-5.dat 1612 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_mid.dihedrals_8-9-10-11.dat 1612 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_mid.dihedrals_9-10-11-12.dat 1612 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_mid.dihedrals_mid.dat 1612 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_mid.intra_1-4.dat 1612 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_mid.intra_1-4mid.dat 1612 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_mid.intra_1-5.dat 1612 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_mid.intra_1-5mid.dat 1612 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_mid.intra_2-5.dat 1612 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_mid.intra_2-6.dat 1612 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_mid.intra_7-11.dat 1612 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_mid.intra_8-11.dat 1612 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_mid.intra_8-12.dat 1612 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_mid.intra_9-12.dat 1612 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.angles_mid.pairs.dat 2139 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.bonds.angles_1-2-3.dat 2139 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.bonds.angles_10-11-12.dat 2139 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.bonds.angles_2-3-4.dat 2139 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.bonds.angles_9-10-11.dat 2139 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.bonds.angles_mid.dat 2139 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.bonds.bonds.dat 2139 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.bonds.dihedrals_1-2-3-4.dat 2139 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.bonds.dihedrals_2-3-4-5.dat 2139 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.bonds.dihedrals_8-9-10-11.dat 2139 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.bonds.dihedrals_9-10-11-12.dat 2139 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.bonds.dihedrals_mid.dat 2139 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.bonds.intra_1-4.dat 2139 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.bonds.intra_1-4mid.dat 2139 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.bonds.intra_1-5.dat 2139 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.bonds.intra_1-5mid.dat 2139 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.bonds.intra_2-5.dat 2139 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.bonds.intra_2-6.dat 2139 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.bonds.intra_7-11.dat 2139 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.bonds.intra_8-11.dat 2139 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.bonds.intra_8-12.dat 2139 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.bonds.intra_9-12.dat 2139 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.bonds.pairs.dat 2666 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_1-2-3-4.angles_1-2-3.dat 2666 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_1-2-3-4.angles_10-11-12.dat 2666 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_1-2-3-4.angles_2-3-4.dat 2666 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_1-2-3-4.angles_9-10-11.dat 2666 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_1-2-3-4.angles_mid.dat 2666 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_1-2-3-4.bonds.dat 2666 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_1-2-3-4.dihedrals_1-2-3-4.dat 2666 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_1-2-3-4.dihedrals_2-3-4-5.dat 2666 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_1-2-3-4.dihedrals_8-9-10-11.dat 2666 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_1-2-3-4.dihedrals_9-10-11-12.dat 2666 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_1-2-3-4.dihedrals_mid.dat 2666 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_1-2-3-4.intra_1-4.dat 2666 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_1-2-3-4.intra_1-4mid.dat 2666 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_1-2-3-4.intra_1-5.dat 2666 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_1-2-3-4.intra_1-5mid.dat 2666 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_1-2-3-4.intra_2-5.dat 2666 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_1-2-3-4.intra_2-6.dat 2666 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_1-2-3-4.intra_7-11.dat 2666 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_1-2-3-4.intra_8-11.dat 2666 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_1-2-3-4.intra_8-12.dat 2666 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_1-2-3-4.intra_9-12.dat 2666 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_1-2-3-4.pairs.dat 2325 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_2-3-4-5.angles_1-2-3.dat 2325 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_2-3-4-5.angles_10-11-12.dat 2325 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_2-3-4-5.angles_2-3-4.dat 2325 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_2-3-4-5.angles_9-10-11.dat 2325 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_2-3-4-5.angles_mid.dat 2325 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_2-3-4-5.bonds.dat 2325 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_2-3-4-5.dihedrals_1-2-3-4.dat 2325 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_2-3-4-5.dihedrals_2-3-4-5.dat 2325 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_2-3-4-5.dihedrals_8-9-10-11.dat 2325 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_2-3-4-5.dihedrals_9-10-11-12.dat 2325 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_2-3-4-5.dihedrals_mid.dat 2325 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_2-3-4-5.intra_1-4.dat 2325 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_2-3-4-5.intra_1-4mid.dat 2325 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_2-3-4-5.intra_1-5.dat 2325 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_2-3-4-5.intra_1-5mid.dat 2325 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_2-3-4-5.intra_2-5.dat 2325 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_2-3-4-5.intra_2-6.dat 2325 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_2-3-4-5.intra_7-11.dat 2325 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_2-3-4-5.intra_8-11.dat 2325 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_2-3-4-5.intra_8-12.dat 2325 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_2-3-4-5.intra_9-12.dat 2325 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_2-3-4-5.pairs.dat 2728 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_8-9-10-11.angles_1-2-3.dat 2728 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_8-9-10-11.angles_10-11-12.dat 2728 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_8-9-10-11.angles_2-3-4.dat 2728 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_8-9-10-11.angles_9-10-11.dat 2728 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_8-9-10-11.angles_mid.dat 2728 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_8-9-10-11.bonds.dat 2728 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_8-9-10-11.dihedrals_1-2-3-4.dat 2728 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_8-9-10-11.dihedrals_2-3-4-5.dat 2728 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_8-9-10-11.dihedrals_8-9-10-11.dat 2728 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_8-9-10-11.dihedrals_9-10-11-12.dat 2728 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_8-9-10-11.dihedrals_mid.dat 2728 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_8-9-10-11.intra_1-4.dat 2728 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_8-9-10-11.intra_1-4mid.dat 2728 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_8-9-10-11.intra_1-5.dat 2728 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_8-9-10-11.intra_1-5mid.dat 2728 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_8-9-10-11.intra_2-5.dat 2728 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_8-9-10-11.intra_2-6.dat 2728 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_8-9-10-11.intra_7-11.dat 2728 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_8-9-10-11.intra_8-11.dat 2728 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_8-9-10-11.intra_8-12.dat 2728 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_8-9-10-11.intra_9-12.dat 2728 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_8-9-10-11.pairs.dat 3503 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_9-10-11-12.angles_1-2-3.dat 3503 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_9-10-11-12.angles_10-11-12.dat 3503 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_9-10-11-12.angles_2-3-4.dat 3503 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_9-10-11-12.angles_9-10-11.dat 3503 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_9-10-11-12.angles_mid.dat 3503 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_9-10-11-12.bonds.dat 3503 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_9-10-11-12.dihedrals_1-2-3-4.dat 3503 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_9-10-11-12.dihedrals_2-3-4-5.dat 3503 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_9-10-11-12.dihedrals_8-9-10-11.dat 3503 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_9-10-11-12.dihedrals_9-10-11-12.dat 3503 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_9-10-11-12.dihedrals_mid.dat 3503 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_9-10-11-12.intra_1-4.dat 3503 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_9-10-11-12.intra_1-4mid.dat 3503 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_9-10-11-12.intra_1-5.dat 3503 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_9-10-11-12.intra_1-5mid.dat 3503 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_9-10-11-12.intra_2-5.dat 3503 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_9-10-11-12.intra_2-6.dat 3503 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_9-10-11-12.intra_7-11.dat 3503 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_9-10-11-12.intra_8-11.dat 3503 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_9-10-11-12.intra_8-12.dat 3503 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_9-10-11-12.intra_9-12.dat 3503 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_9-10-11-12.pairs.dat 2108 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_mid.angles_1-2-3.dat 2108 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_mid.angles_10-11-12.dat 2108 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_mid.angles_2-3-4.dat 2108 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_mid.angles_9-10-11.dat 2108 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_mid.angles_mid.dat 2108 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_mid.bonds.dat 2108 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_mid.dihedrals_1-2-3-4.dat 2108 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_mid.dihedrals_2-3-4-5.dat 2108 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_mid.dihedrals_8-9-10-11.dat 2108 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_mid.dihedrals_9-10-11-12.dat 2108 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_mid.dihedrals_mid.dat 2108 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_mid.intra_1-4.dat 2108 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_mid.intra_1-4mid.dat 2108 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_mid.intra_1-5.dat 2108 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_mid.intra_1-5mid.dat 2108 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_mid.intra_2-5.dat 2108 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_mid.intra_2-6.dat 2108 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_mid.intra_7-11.dat 2108 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_mid.intra_8-11.dat 2108 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_mid.intra_8-12.dat 2108 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_mid.intra_9-12.dat 2108 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.dihedrals_mid.pairs.dat 1860 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_1-4.angles_1-2-3.dat 1860 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_1-4.angles_10-11-12.dat 1860 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_1-4.angles_2-3-4.dat 1860 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_1-4.angles_9-10-11.dat 1860 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_1-4.angles_mid.dat 1860 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_1-4.bonds.dat 1860 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_1-4.dihedrals_1-2-3-4.dat 1860 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_1-4.dihedrals_2-3-4-5.dat 1860 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_1-4.dihedrals_8-9-10-11.dat 1860 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_1-4.dihedrals_9-10-11-12.dat 1860 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_1-4.dihedrals_mid.dat 1860 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_1-4.intra_1-4.dat 1860 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_1-4.intra_1-4mid.dat 1860 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_1-4.intra_1-5.dat 1860 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_1-4.intra_1-5mid.dat 1860 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_1-4.intra_2-5.dat 1860 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_1-4.intra_2-6.dat 1860 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_1-4.intra_7-11.dat 1860 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_1-4.intra_8-11.dat 1860 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_1-4.intra_8-12.dat 1860 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_1-4.intra_9-12.dat 1860 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_1-4.pairs.dat 1457 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_1-4mid.angles_1-2-3.dat 1457 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_1-4mid.angles_10-11-12.dat 1457 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_1-4mid.angles_2-3-4.dat 1457 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_1-4mid.angles_9-10-11.dat 1457 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_1-4mid.angles_mid.dat 1457 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_1-4mid.bonds.dat 1457 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_1-4mid.dihedrals_1-2-3-4.dat 1457 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_1-4mid.dihedrals_2-3-4-5.dat 1457 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_1-4mid.dihedrals_8-9-10-11.dat 1457 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_1-4mid.dihedrals_9-10-11-12.dat 1457 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_1-4mid.dihedrals_mid.dat 1457 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_1-4mid.intra_1-4.dat 1457 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_1-4mid.intra_1-4mid.dat 1457 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_1-4mid.intra_1-5.dat 1457 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_1-4mid.intra_1-5mid.dat 1457 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_1-4mid.intra_2-5.dat 1457 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_1-4mid.intra_2-6.dat 1457 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_1-4mid.intra_7-11.dat 1457 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_1-4mid.intra_8-11.dat 1457 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_1-4mid.intra_8-12.dat 1457 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_1-4mid.intra_9-12.dat 1457 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_1-4mid.pairs.dat 2604 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_1-5.angles_1-2-3.dat 2604 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_1-5.angles_10-11-12.dat 2604 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_1-5.angles_2-3-4.dat 2604 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_1-5.angles_9-10-11.dat 2604 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_1-5.angles_mid.dat 2604 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_1-5.bonds.dat 2604 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_1-5.dihedrals_1-2-3-4.dat 2604 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_1-5.dihedrals_2-3-4-5.dat 2604 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_1-5.dihedrals_8-9-10-11.dat 2604 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_1-5.dihedrals_9-10-11-12.dat 2604 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_1-5.dihedrals_mid.dat 2604 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_1-5.intra_1-4.dat 2604 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_1-5.intra_1-4mid.dat 2604 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_1-5.intra_1-5.dat 2604 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_1-5.intra_1-5mid.dat 2604 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_1-5.intra_2-5.dat 2604 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_1-5.intra_2-6.dat 2604 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_1-5.intra_7-11.dat 2604 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_1-5.intra_8-11.dat 2604 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_1-5.intra_8-12.dat 2604 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_1-5.intra_9-12.dat 2604 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_1-5.pairs.dat 2170 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_1-5mid.angles_1-2-3.dat 2170 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_1-5mid.angles_10-11-12.dat 2170 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_1-5mid.angles_2-3-4.dat 2170 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_1-5mid.angles_9-10-11.dat 2170 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_1-5mid.angles_mid.dat 2170 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_1-5mid.bonds.dat 2170 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_1-5mid.dihedrals_1-2-3-4.dat 2170 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_1-5mid.dihedrals_2-3-4-5.dat 2170 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_1-5mid.dihedrals_8-9-10-11.dat 2170 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_1-5mid.dihedrals_9-10-11-12.dat 2170 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_1-5mid.dihedrals_mid.dat 2170 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_1-5mid.intra_1-4.dat 2170 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_1-5mid.intra_1-4mid.dat 2170 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_1-5mid.intra_1-5.dat 2170 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_1-5mid.intra_1-5mid.dat 2170 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_1-5mid.intra_2-5.dat 2170 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_1-5mid.intra_2-6.dat 2170 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_1-5mid.intra_7-11.dat 2170 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_1-5mid.intra_8-11.dat 2170 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_1-5mid.intra_8-12.dat 2170 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_1-5mid.intra_9-12.dat 2170 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_1-5mid.pairs.dat 1643 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_2-5.angles_1-2-3.dat 1643 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_2-5.angles_10-11-12.dat 1643 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_2-5.angles_2-3-4.dat 1643 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_2-5.angles_9-10-11.dat 1643 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_2-5.angles_mid.dat 1643 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_2-5.bonds.dat 1643 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_2-5.dihedrals_1-2-3-4.dat 1643 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_2-5.dihedrals_2-3-4-5.dat 1643 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_2-5.dihedrals_8-9-10-11.dat 1643 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_2-5.dihedrals_9-10-11-12.dat 1643 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_2-5.dihedrals_mid.dat 1643 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_2-5.intra_1-4.dat 1643 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_2-5.intra_1-4mid.dat 1643 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_2-5.intra_1-5.dat 1643 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_2-5.intra_1-5mid.dat 1643 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_2-5.intra_2-5.dat 1643 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_2-5.intra_2-6.dat 1643 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_2-5.intra_7-11.dat 1643 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_2-5.intra_8-11.dat 1643 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_2-5.intra_8-12.dat 1643 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_2-5.intra_9-12.dat 1643 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_2-5.pairs.dat 2356 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_2-6.angles_1-2-3.dat 2356 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_2-6.angles_10-11-12.dat 2356 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_2-6.angles_2-3-4.dat 2356 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_2-6.angles_9-10-11.dat 2356 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_2-6.angles_mid.dat 2356 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_2-6.bonds.dat 2356 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_2-6.dihedrals_1-2-3-4.dat 2356 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_2-6.dihedrals_2-3-4-5.dat 2356 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_2-6.dihedrals_8-9-10-11.dat 2356 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_2-6.dihedrals_9-10-11-12.dat 2356 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_2-6.dihedrals_mid.dat 2356 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_2-6.intra_1-4.dat 2356 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_2-6.intra_1-4mid.dat 2356 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_2-6.intra_1-5.dat 2356 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_2-6.intra_1-5mid.dat 2356 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_2-6.intra_2-5.dat 2356 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_2-6.intra_2-6.dat 2356 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_2-6.intra_7-11.dat 2356 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_2-6.intra_8-11.dat 2356 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_2-6.intra_8-12.dat 2356 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_2-6.intra_9-12.dat 2356 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_2-6.pairs.dat 2449 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_7-11.angles_1-2-3.dat 2449 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_7-11.angles_10-11-12.dat 2449 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_7-11.angles_2-3-4.dat 2449 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_7-11.angles_9-10-11.dat 2449 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_7-11.angles_mid.dat 2449 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_7-11.bonds.dat 2449 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_7-11.dihedrals_1-2-3-4.dat 2449 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_7-11.dihedrals_2-3-4-5.dat 2449 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_7-11.dihedrals_8-9-10-11.dat 2449 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_7-11.dihedrals_9-10-11-12.dat 2449 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_7-11.dihedrals_mid.dat 2449 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_7-11.intra_1-4.dat 2449 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_7-11.intra_1-4mid.dat 2449 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_7-11.intra_1-5.dat 2449 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_7-11.intra_1-5mid.dat 2449 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_7-11.intra_2-5.dat 2449 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_7-11.intra_2-6.dat 2449 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_7-11.intra_7-11.dat 2449 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_7-11.intra_8-11.dat 2449 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_7-11.intra_8-12.dat 2449 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_7-11.intra_9-12.dat 2449 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_7-11.pairs.dat 1829 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_8-11.angles_1-2-3.dat 1829 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_8-11.angles_10-11-12.dat 1829 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_8-11.angles_2-3-4.dat 1829 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_8-11.angles_9-10-11.dat 1829 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_8-11.angles_mid.dat 1829 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_8-11.bonds.dat 1829 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_8-11.dihedrals_1-2-3-4.dat 1829 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_8-11.dihedrals_2-3-4-5.dat 1829 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_8-11.dihedrals_8-9-10-11.dat 1829 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_8-11.dihedrals_9-10-11-12.dat 1829 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_8-11.dihedrals_mid.dat 1829 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_8-11.intra_1-4.dat 1829 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_8-11.intra_1-4mid.dat 1829 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_8-11.intra_1-5.dat 1829 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_8-11.intra_1-5mid.dat 1829 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_8-11.intra_2-5.dat 1829 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_8-11.intra_2-6.dat 1829 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_8-11.intra_7-11.dat 1829 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_8-11.intra_8-11.dat 1829 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_8-11.intra_8-12.dat 1829 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_8-11.intra_9-12.dat 1829 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_8-11.pairs.dat 3038 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_8-12.angles_1-2-3.dat 3038 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_8-12.angles_10-11-12.dat 3038 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_8-12.angles_2-3-4.dat 3038 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_8-12.angles_9-10-11.dat 3038 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_8-12.angles_mid.dat 3038 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_8-12.bonds.dat 3038 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_8-12.dihedrals_1-2-3-4.dat 3038 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_8-12.dihedrals_2-3-4-5.dat 3038 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_8-12.dihedrals_8-9-10-11.dat 3038 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_8-12.dihedrals_9-10-11-12.dat 3038 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_8-12.dihedrals_mid.dat 3038 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_8-12.intra_1-4.dat 3038 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_8-12.intra_1-4mid.dat 3038 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_8-12.intra_1-5.dat 3038 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_8-12.intra_1-5mid.dat 3038 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_8-12.intra_2-5.dat 3038 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_8-12.intra_2-6.dat 3038 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_8-12.intra_7-11.dat 3038 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_8-12.intra_8-11.dat 3038 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_8-12.intra_8-12.dat 3038 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_8-12.intra_9-12.dat 3038 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_8-12.pairs.dat 2108 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_9-12.angles_1-2-3.dat 2108 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_9-12.angles_10-11-12.dat 2108 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_9-12.angles_2-3-4.dat 2108 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_9-12.angles_9-10-11.dat 2108 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_9-12.angles_mid.dat 2108 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_9-12.bonds.dat 2108 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_9-12.dihedrals_1-2-3-4.dat 2108 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_9-12.dihedrals_2-3-4-5.dat 2108 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_9-12.dihedrals_8-9-10-11.dat 2108 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_9-12.dihedrals_9-10-11-12.dat 2108 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_9-12.dihedrals_mid.dat 2108 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_9-12.intra_1-4.dat 2108 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_9-12.intra_1-4mid.dat 2108 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_9-12.intra_1-5.dat 2108 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_9-12.intra_1-5mid.dat 2108 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_9-12.intra_2-5.dat 2108 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_9-12.intra_2-6.dat 2108 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_9-12.intra_7-11.dat 2108 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_9-12.intra_8-11.dat 2108 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_9-12.intra_8-12.dat 2108 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_9-12.intra_9-12.dat 2108 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.intra_9-12.pairs.dat 2449 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.pairs.angles_1-2-3.dat 2449 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.pairs.angles_10-11-12.dat 2449 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.pairs.angles_2-3-4.dat 2449 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.pairs.angles_9-10-11.dat 2449 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.pairs.angles_mid.dat 2449 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.pairs.bonds.dat 2449 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.pairs.dihedrals_1-2-3-4.dat 2449 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.pairs.dihedrals_2-3-4-5.dat 2449 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.pairs.dihedrals_8-9-10-11.dat 2449 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.pairs.dihedrals_9-10-11-12.dat 2449 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.pairs.dihedrals_mid.dat 2449 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.pairs.intra_1-4.dat 2449 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.pairs.intra_1-4mid.dat 2449 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.pairs.intra_1-5.dat 2449 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.pairs.intra_1-5mid.dat 2449 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.pairs.intra_2-5.dat 2449 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.pairs.intra_2-6.dat 2449 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.pairs.intra_7-11.dat 2449 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.pairs.intra_8-11.dat 2449 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.pairs.intra_8-12.dat 2449 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.pairs.intra_9-12.dat 2449 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces.pairs.pairs.dat 1860 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces_diag.angles_1-2-3.dat 2511 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces_diag.angles_10-11-12.dat 1736 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces_diag.angles_2-3-4.dat 1984 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces_diag.angles_9-10-11.dat 1612 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces_diag.angles_mid.dat 2139 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces_diag.bonds.dat 2666 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces_diag.dihedrals_1-2-3-4.dat 2325 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces_diag.dihedrals_2-3-4-5.dat 2728 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces_diag.dihedrals_8-9-10-11.dat 3503 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces_diag.dihedrals_9-10-11-12.dat 2108 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces_diag.dihedrals_mid.dat 1860 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces_diag.intra_1-4.dat 1457 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces_diag.intra_1-4mid.dat 2604 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces_diag.intra_1-5.dat 2170 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces_diag.intra_1-5mid.dat 1643 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces_diag.intra_2-5.dat 2356 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces_diag.intra_2-6.dat 2449 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces_diag.intra_7-11.dat 1829 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces_diag.intra_8-11.dat 3038 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces_diag.intra_8-12.dat 2108 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces_diag.intra_9-12.dat 2449 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_forces_diag.pairs.dat 1860 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_1-2-3.angles_1-2-3.dat 1860 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_1-2-3.angles_10-11-12.dat 1860 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_1-2-3.angles_2-3-4.dat 1860 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_1-2-3.angles_9-10-11.dat 1860 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_1-2-3.angles_mid.dat 1860 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_1-2-3.bonds.dat 1860 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_1-2-3.dihedrals_1-2-3-4.dat 1860 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_1-2-3.dihedrals_2-3-4-5.dat 1860 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_1-2-3.dihedrals_8-9-10-11.dat 1860 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_1-2-3.dihedrals_9-10-11-12.dat 1860 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_1-2-3.dihedrals_mid.dat 1860 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_1-2-3.intra_1-4.dat 1860 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_1-2-3.intra_1-4mid.dat 1860 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_1-2-3.intra_1-5.dat 1860 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_1-2-3.intra_1-5mid.dat 1860 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_1-2-3.intra_2-5.dat 1860 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_1-2-3.intra_2-6.dat 1860 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_1-2-3.intra_7-11.dat 1860 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_1-2-3.intra_8-11.dat 1860 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_1-2-3.intra_8-12.dat 1860 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_1-2-3.intra_9-12.dat 1860 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_1-2-3.pairs.dat 2511 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_10-11-12.angles_1-2-3.dat 2511 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_10-11-12.angles_10-11-12.dat 2511 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_10-11-12.angles_2-3-4.dat 2511 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_10-11-12.angles_9-10-11.dat 2511 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_10-11-12.angles_mid.dat 2511 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_10-11-12.bonds.dat 2511 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_10-11-12.dihedrals_1-2-3-4.dat 2511 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_10-11-12.dihedrals_2-3-4-5.dat 2511 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_10-11-12.dihedrals_8-9-10-11.dat 2511 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_10-11-12.dihedrals_9-10-11-12.dat 2511 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_10-11-12.dihedrals_mid.dat 2511 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_10-11-12.intra_1-4.dat 2511 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_10-11-12.intra_1-4mid.dat 2511 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_10-11-12.intra_1-5.dat 2511 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_10-11-12.intra_1-5mid.dat 2511 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_10-11-12.intra_2-5.dat 2511 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_10-11-12.intra_2-6.dat 2511 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_10-11-12.intra_7-11.dat 2511 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_10-11-12.intra_8-11.dat 2511 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_10-11-12.intra_8-12.dat 2511 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_10-11-12.intra_9-12.dat 2511 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_10-11-12.pairs.dat 1736 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_2-3-4.angles_1-2-3.dat 1736 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_2-3-4.angles_10-11-12.dat 1736 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_2-3-4.angles_2-3-4.dat 1736 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_2-3-4.angles_9-10-11.dat 1736 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_2-3-4.angles_mid.dat 1736 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_2-3-4.bonds.dat 1736 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_2-3-4.dihedrals_1-2-3-4.dat 1736 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_2-3-4.dihedrals_2-3-4-5.dat 1736 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_2-3-4.dihedrals_8-9-10-11.dat 1736 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_2-3-4.dihedrals_9-10-11-12.dat 1736 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_2-3-4.dihedrals_mid.dat 1736 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_2-3-4.intra_1-4.dat 1736 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_2-3-4.intra_1-4mid.dat 1736 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_2-3-4.intra_1-5.dat 1736 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_2-3-4.intra_1-5mid.dat 1736 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_2-3-4.intra_2-5.dat 1736 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_2-3-4.intra_2-6.dat 1736 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_2-3-4.intra_7-11.dat 1736 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_2-3-4.intra_8-11.dat 1736 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_2-3-4.intra_8-12.dat 1736 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_2-3-4.intra_9-12.dat 1736 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_2-3-4.pairs.dat 1984 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_9-10-11.angles_1-2-3.dat 1984 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_9-10-11.angles_10-11-12.dat 1984 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_9-10-11.angles_2-3-4.dat 1984 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_9-10-11.angles_9-10-11.dat 1984 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_9-10-11.angles_mid.dat 1984 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_9-10-11.bonds.dat 1984 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_9-10-11.dihedrals_1-2-3-4.dat 1984 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_9-10-11.dihedrals_2-3-4-5.dat 1984 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_9-10-11.dihedrals_8-9-10-11.dat 1984 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_9-10-11.dihedrals_9-10-11-12.dat 1984 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_9-10-11.dihedrals_mid.dat 1984 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_9-10-11.intra_1-4.dat 1984 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_9-10-11.intra_1-4mid.dat 1984 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_9-10-11.intra_1-5.dat 1984 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_9-10-11.intra_1-5mid.dat 1984 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_9-10-11.intra_2-5.dat 1984 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_9-10-11.intra_2-6.dat 1984 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_9-10-11.intra_7-11.dat 1984 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_9-10-11.intra_8-11.dat 1984 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_9-10-11.intra_8-12.dat 1984 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_9-10-11.intra_9-12.dat 1984 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_9-10-11.pairs.dat 1612 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_mid.angles_1-2-3.dat 1612 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_mid.angles_10-11-12.dat 1612 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_mid.angles_2-3-4.dat 1612 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_mid.angles_9-10-11.dat 1612 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_mid.angles_mid.dat 1612 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_mid.bonds.dat 1612 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_mid.dihedrals_1-2-3-4.dat 1612 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_mid.dihedrals_2-3-4-5.dat 1612 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_mid.dihedrals_8-9-10-11.dat 1612 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_mid.dihedrals_9-10-11-12.dat 1612 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_mid.dihedrals_mid.dat 1612 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_mid.intra_1-4.dat 1612 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_mid.intra_1-4mid.dat 1612 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_mid.intra_1-5.dat 1612 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_mid.intra_1-5mid.dat 1612 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_mid.intra_2-5.dat 1612 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_mid.intra_2-6.dat 1612 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_mid.intra_7-11.dat 1612 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_mid.intra_8-11.dat 1612 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_mid.intra_8-12.dat 1612 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_mid.intra_9-12.dat 1612 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.angles_mid.pairs.dat 2139 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.bonds.angles_1-2-3.dat 2139 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.bonds.angles_10-11-12.dat 2139 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.bonds.angles_2-3-4.dat 2139 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.bonds.angles_9-10-11.dat 2139 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.bonds.angles_mid.dat 2139 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.bonds.bonds.dat 2139 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.bonds.dihedrals_1-2-3-4.dat 2139 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.bonds.dihedrals_2-3-4-5.dat 2139 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.bonds.dihedrals_8-9-10-11.dat 2139 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.bonds.dihedrals_9-10-11-12.dat 2139 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.bonds.dihedrals_mid.dat 2139 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.bonds.intra_1-4.dat 2139 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.bonds.intra_1-4mid.dat 2139 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.bonds.intra_1-5.dat 2139 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.bonds.intra_1-5mid.dat 2139 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.bonds.intra_2-5.dat 2139 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.bonds.intra_2-6.dat 2139 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.bonds.intra_7-11.dat 2139 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.bonds.intra_8-11.dat 2139 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.bonds.intra_8-12.dat 2139 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.bonds.intra_9-12.dat 2139 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.bonds.pairs.dat 2666 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_1-2-3-4.angles_1-2-3.dat 2666 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_1-2-3-4.angles_10-11-12.dat 2666 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_1-2-3-4.angles_2-3-4.dat 2666 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_1-2-3-4.angles_9-10-11.dat 2666 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_1-2-3-4.angles_mid.dat 2666 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_1-2-3-4.bonds.dat 2666 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_1-2-3-4.dihedrals_1-2-3-4.dat 2666 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_1-2-3-4.dihedrals_2-3-4-5.dat 2666 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_1-2-3-4.dihedrals_8-9-10-11.dat 2666 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_1-2-3-4.dihedrals_9-10-11-12.dat 2666 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_1-2-3-4.dihedrals_mid.dat 2666 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_1-2-3-4.intra_1-4.dat 2666 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_1-2-3-4.intra_1-4mid.dat 2666 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_1-2-3-4.intra_1-5.dat 2666 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_1-2-3-4.intra_1-5mid.dat 2666 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_1-2-3-4.intra_2-5.dat 2666 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_1-2-3-4.intra_2-6.dat 2666 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_1-2-3-4.intra_7-11.dat 2666 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_1-2-3-4.intra_8-11.dat 2666 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_1-2-3-4.intra_8-12.dat 2666 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_1-2-3-4.intra_9-12.dat 2666 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_1-2-3-4.pairs.dat 2325 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_2-3-4-5.angles_1-2-3.dat 2325 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_2-3-4-5.angles_10-11-12.dat 2325 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_2-3-4-5.angles_2-3-4.dat 2325 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_2-3-4-5.angles_9-10-11.dat 2325 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_2-3-4-5.angles_mid.dat 2325 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_2-3-4-5.bonds.dat 2325 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_2-3-4-5.dihedrals_1-2-3-4.dat 2325 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_2-3-4-5.dihedrals_2-3-4-5.dat 2325 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_2-3-4-5.dihedrals_8-9-10-11.dat 2325 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_2-3-4-5.dihedrals_9-10-11-12.dat 2325 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_2-3-4-5.dihedrals_mid.dat 2325 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_2-3-4-5.intra_1-4.dat 2325 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_2-3-4-5.intra_1-4mid.dat 2325 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_2-3-4-5.intra_1-5.dat 2325 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_2-3-4-5.intra_1-5mid.dat 2325 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_2-3-4-5.intra_2-5.dat 2325 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_2-3-4-5.intra_2-6.dat 2325 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_2-3-4-5.intra_7-11.dat 2325 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_2-3-4-5.intra_8-11.dat 2325 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_2-3-4-5.intra_8-12.dat 2325 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_2-3-4-5.intra_9-12.dat 2325 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_2-3-4-5.pairs.dat 2728 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_8-9-10-11.angles_1-2-3.dat 2728 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_8-9-10-11.angles_10-11-12.dat 2728 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_8-9-10-11.angles_2-3-4.dat 2728 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_8-9-10-11.angles_9-10-11.dat 2728 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_8-9-10-11.angles_mid.dat 2728 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_8-9-10-11.bonds.dat 2728 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_8-9-10-11.dihedrals_1-2-3-4.dat 2728 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_8-9-10-11.dihedrals_2-3-4-5.dat 2728 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_8-9-10-11.dihedrals_8-9-10-11.dat 2728 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_8-9-10-11.dihedrals_9-10-11-12.dat 2728 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_8-9-10-11.dihedrals_mid.dat 2728 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_8-9-10-11.intra_1-4.dat 2728 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_8-9-10-11.intra_1-4mid.dat 2728 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_8-9-10-11.intra_1-5.dat 2728 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_8-9-10-11.intra_1-5mid.dat 2728 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_8-9-10-11.intra_2-5.dat 2728 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_8-9-10-11.intra_2-6.dat 2728 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_8-9-10-11.intra_7-11.dat 2728 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_8-9-10-11.intra_8-11.dat 2728 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_8-9-10-11.intra_8-12.dat 2728 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_8-9-10-11.intra_9-12.dat 2728 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_8-9-10-11.pairs.dat 3503 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_9-10-11-12.angles_1-2-3.dat 3503 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_9-10-11-12.angles_10-11-12.dat 3503 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_9-10-11-12.angles_2-3-4.dat 3503 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_9-10-11-12.angles_9-10-11.dat 3503 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_9-10-11-12.angles_mid.dat 3503 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_9-10-11-12.bonds.dat 3503 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_9-10-11-12.dihedrals_1-2-3-4.dat 3503 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_9-10-11-12.dihedrals_2-3-4-5.dat 3503 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_9-10-11-12.dihedrals_8-9-10-11.dat 3503 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_9-10-11-12.dihedrals_9-10-11-12.dat 3503 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_9-10-11-12.dihedrals_mid.dat 3503 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_9-10-11-12.intra_1-4.dat 3503 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_9-10-11-12.intra_1-4mid.dat 3503 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_9-10-11-12.intra_1-5.dat 3503 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_9-10-11-12.intra_1-5mid.dat 3503 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_9-10-11-12.intra_2-5.dat 3503 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_9-10-11-12.intra_2-6.dat 3503 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_9-10-11-12.intra_7-11.dat 3503 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_9-10-11-12.intra_8-11.dat 3503 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_9-10-11-12.intra_8-12.dat 3503 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_9-10-11-12.intra_9-12.dat 3503 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_9-10-11-12.pairs.dat 2108 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_mid.angles_1-2-3.dat 2108 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_mid.angles_10-11-12.dat 2108 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_mid.angles_2-3-4.dat 2108 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_mid.angles_9-10-11.dat 2108 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_mid.angles_mid.dat 2108 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_mid.bonds.dat 2108 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_mid.dihedrals_1-2-3-4.dat 2108 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_mid.dihedrals_2-3-4-5.dat 2108 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_mid.dihedrals_8-9-10-11.dat 2108 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_mid.dihedrals_9-10-11-12.dat 2108 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_mid.dihedrals_mid.dat 2108 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_mid.intra_1-4.dat 2108 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_mid.intra_1-4mid.dat 2108 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_mid.intra_1-5.dat 2108 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_mid.intra_1-5mid.dat 2108 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_mid.intra_2-5.dat 2108 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_mid.intra_2-6.dat 2108 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_mid.intra_7-11.dat 2108 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_mid.intra_8-11.dat 2108 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_mid.intra_8-12.dat 2108 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_mid.intra_9-12.dat 2108 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.dihedrals_mid.pairs.dat 1860 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_1-4.angles_1-2-3.dat 1860 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_1-4.angles_10-11-12.dat 1860 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_1-4.angles_2-3-4.dat 1860 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_1-4.angles_9-10-11.dat 1860 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_1-4.angles_mid.dat 1860 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_1-4.bonds.dat 1860 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_1-4.dihedrals_1-2-3-4.dat 1860 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_1-4.dihedrals_2-3-4-5.dat 1860 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_1-4.dihedrals_8-9-10-11.dat 1860 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_1-4.dihedrals_9-10-11-12.dat 1860 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_1-4.dihedrals_mid.dat 1860 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_1-4.intra_1-4.dat 1860 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_1-4.intra_1-4mid.dat 1860 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_1-4.intra_1-5.dat 1860 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_1-4.intra_1-5mid.dat 1860 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_1-4.intra_2-5.dat 1860 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_1-4.intra_2-6.dat 1860 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_1-4.intra_7-11.dat 1860 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_1-4.intra_8-11.dat 1860 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_1-4.intra_8-12.dat 1860 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_1-4.intra_9-12.dat 1860 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_1-4.pairs.dat 1457 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_1-4mid.angles_1-2-3.dat 1457 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_1-4mid.angles_10-11-12.dat 1457 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_1-4mid.angles_2-3-4.dat 1457 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_1-4mid.angles_9-10-11.dat 1457 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_1-4mid.angles_mid.dat 1457 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_1-4mid.bonds.dat 1457 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_1-4mid.dihedrals_1-2-3-4.dat 1457 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_1-4mid.dihedrals_2-3-4-5.dat 1457 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_1-4mid.dihedrals_8-9-10-11.dat 1457 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_1-4mid.dihedrals_9-10-11-12.dat 1457 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_1-4mid.dihedrals_mid.dat 1457 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_1-4mid.intra_1-4.dat 1457 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_1-4mid.intra_1-4mid.dat 1457 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_1-4mid.intra_1-5.dat 1457 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_1-4mid.intra_1-5mid.dat 1457 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_1-4mid.intra_2-5.dat 1457 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_1-4mid.intra_2-6.dat 1457 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_1-4mid.intra_7-11.dat 1457 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_1-4mid.intra_8-11.dat 1457 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_1-4mid.intra_8-12.dat 1457 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_1-4mid.intra_9-12.dat 1457 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_1-4mid.pairs.dat 2604 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_1-5.angles_1-2-3.dat 2604 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_1-5.angles_10-11-12.dat 2604 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_1-5.angles_2-3-4.dat 2604 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_1-5.angles_9-10-11.dat 2604 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_1-5.angles_mid.dat 2604 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_1-5.bonds.dat 2604 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_1-5.dihedrals_1-2-3-4.dat 2604 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_1-5.dihedrals_2-3-4-5.dat 2604 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_1-5.dihedrals_8-9-10-11.dat 2604 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_1-5.dihedrals_9-10-11-12.dat 2604 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_1-5.dihedrals_mid.dat 2604 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_1-5.intra_1-4.dat 2604 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_1-5.intra_1-4mid.dat 2604 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_1-5.intra_1-5.dat 2604 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_1-5.intra_1-5mid.dat 2604 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_1-5.intra_2-5.dat 2604 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_1-5.intra_2-6.dat 2604 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_1-5.intra_7-11.dat 2604 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_1-5.intra_8-11.dat 2604 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_1-5.intra_8-12.dat 2604 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_1-5.intra_9-12.dat 2604 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_1-5.pairs.dat 2170 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_1-5mid.angles_1-2-3.dat 2170 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_1-5mid.angles_10-11-12.dat 2170 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_1-5mid.angles_2-3-4.dat 2170 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_1-5mid.angles_9-10-11.dat 2170 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_1-5mid.angles_mid.dat 2170 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_1-5mid.bonds.dat 2170 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_1-5mid.dihedrals_1-2-3-4.dat 2170 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_1-5mid.dihedrals_2-3-4-5.dat 2170 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_1-5mid.dihedrals_8-9-10-11.dat 2170 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_1-5mid.dihedrals_9-10-11-12.dat 2170 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_1-5mid.dihedrals_mid.dat 2170 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_1-5mid.intra_1-4.dat 2170 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_1-5mid.intra_1-4mid.dat 2170 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_1-5mid.intra_1-5.dat 2170 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_1-5mid.intra_1-5mid.dat 2170 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_1-5mid.intra_2-5.dat 2170 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_1-5mid.intra_2-6.dat 2170 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_1-5mid.intra_7-11.dat 2170 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_1-5mid.intra_8-11.dat 2170 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_1-5mid.intra_8-12.dat 2170 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_1-5mid.intra_9-12.dat 2170 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_1-5mid.pairs.dat 1643 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_2-5.angles_1-2-3.dat 1643 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_2-5.angles_10-11-12.dat 1643 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_2-5.angles_2-3-4.dat 1643 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_2-5.angles_9-10-11.dat 1643 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_2-5.angles_mid.dat 1643 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_2-5.bonds.dat 1643 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_2-5.dihedrals_1-2-3-4.dat 1643 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_2-5.dihedrals_2-3-4-5.dat 1643 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_2-5.dihedrals_8-9-10-11.dat 1643 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_2-5.dihedrals_9-10-11-12.dat 1643 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_2-5.dihedrals_mid.dat 1643 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_2-5.intra_1-4.dat 1643 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_2-5.intra_1-4mid.dat 1643 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_2-5.intra_1-5.dat 1643 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_2-5.intra_1-5mid.dat 1643 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_2-5.intra_2-5.dat 1643 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_2-5.intra_2-6.dat 1643 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_2-5.intra_7-11.dat 1643 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_2-5.intra_8-11.dat 1643 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_2-5.intra_8-12.dat 1643 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_2-5.intra_9-12.dat 1643 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_2-5.pairs.dat 2356 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_2-6.angles_1-2-3.dat 2356 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_2-6.angles_10-11-12.dat 2356 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_2-6.angles_2-3-4.dat 2356 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_2-6.angles_9-10-11.dat 2356 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_2-6.angles_mid.dat 2356 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_2-6.bonds.dat 2356 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_2-6.dihedrals_1-2-3-4.dat 2356 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_2-6.dihedrals_2-3-4-5.dat 2356 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_2-6.dihedrals_8-9-10-11.dat 2356 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_2-6.dihedrals_9-10-11-12.dat 2356 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_2-6.dihedrals_mid.dat 2356 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_2-6.intra_1-4.dat 2356 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_2-6.intra_1-4mid.dat 2356 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_2-6.intra_1-5.dat 2356 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_2-6.intra_1-5mid.dat 2356 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_2-6.intra_2-5.dat 2356 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_2-6.intra_2-6.dat 2356 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_2-6.intra_7-11.dat 2356 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_2-6.intra_8-11.dat 2356 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_2-6.intra_8-12.dat 2356 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_2-6.intra_9-12.dat 2356 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_2-6.pairs.dat 2449 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_7-11.angles_1-2-3.dat 2449 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_7-11.angles_10-11-12.dat 2449 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_7-11.angles_2-3-4.dat 2449 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_7-11.angles_9-10-11.dat 2449 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_7-11.angles_mid.dat 2449 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_7-11.bonds.dat 2449 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_7-11.dihedrals_1-2-3-4.dat 2449 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_7-11.dihedrals_2-3-4-5.dat 2449 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_7-11.dihedrals_8-9-10-11.dat 2449 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_7-11.dihedrals_9-10-11-12.dat 2449 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_7-11.dihedrals_mid.dat 2449 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_7-11.intra_1-4.dat 2449 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_7-11.intra_1-4mid.dat 2449 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_7-11.intra_1-5.dat 2449 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_7-11.intra_1-5mid.dat 2449 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_7-11.intra_2-5.dat 2449 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_7-11.intra_2-6.dat 2449 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_7-11.intra_7-11.dat 2449 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_7-11.intra_8-11.dat 2449 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_7-11.intra_8-12.dat 2449 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_7-11.intra_9-12.dat 2449 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_7-11.pairs.dat 1829 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_8-11.angles_1-2-3.dat 1829 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_8-11.angles_10-11-12.dat 1829 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_8-11.angles_2-3-4.dat 1829 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_8-11.angles_9-10-11.dat 1829 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_8-11.angles_mid.dat 1829 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_8-11.bonds.dat 1829 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_8-11.dihedrals_1-2-3-4.dat 1829 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_8-11.dihedrals_2-3-4-5.dat 1829 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_8-11.dihedrals_8-9-10-11.dat 1829 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_8-11.dihedrals_9-10-11-12.dat 1829 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_8-11.dihedrals_mid.dat 1829 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_8-11.intra_1-4.dat 1829 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_8-11.intra_1-4mid.dat 1829 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_8-11.intra_1-5.dat 1829 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_8-11.intra_1-5mid.dat 1829 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_8-11.intra_2-5.dat 1829 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_8-11.intra_2-6.dat 1829 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_8-11.intra_7-11.dat 1829 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_8-11.intra_8-11.dat 1829 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_8-11.intra_8-12.dat 1829 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_8-11.intra_9-12.dat 1829 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_8-11.pairs.dat 3038 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_8-12.angles_1-2-3.dat 3038 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_8-12.angles_10-11-12.dat 3038 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_8-12.angles_2-3-4.dat 3038 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_8-12.angles_9-10-11.dat 3038 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_8-12.angles_mid.dat 3038 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_8-12.bonds.dat 3038 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_8-12.dihedrals_1-2-3-4.dat 3038 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_8-12.dihedrals_2-3-4-5.dat 3038 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_8-12.dihedrals_8-9-10-11.dat 3038 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_8-12.dihedrals_9-10-11-12.dat 3038 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_8-12.dihedrals_mid.dat 3038 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_8-12.intra_1-4.dat 3038 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_8-12.intra_1-4mid.dat 3038 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_8-12.intra_1-5.dat 3038 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_8-12.intra_1-5mid.dat 3038 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_8-12.intra_2-5.dat 3038 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_8-12.intra_2-6.dat 3038 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_8-12.intra_7-11.dat 3038 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_8-12.intra_8-11.dat 3038 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_8-12.intra_8-12.dat 3038 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_8-12.intra_9-12.dat 3038 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_8-12.pairs.dat 2108 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_9-12.angles_1-2-3.dat 2108 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_9-12.angles_10-11-12.dat 2108 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_9-12.angles_2-3-4.dat 2108 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_9-12.angles_9-10-11.dat 2108 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_9-12.angles_mid.dat 2108 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_9-12.bonds.dat 2108 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_9-12.dihedrals_1-2-3-4.dat 2108 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_9-12.dihedrals_2-3-4-5.dat 2108 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_9-12.dihedrals_8-9-10-11.dat 2108 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_9-12.dihedrals_9-10-11-12.dat 2108 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_9-12.dihedrals_mid.dat 2108 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_9-12.intra_1-4.dat 2108 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_9-12.intra_1-4mid.dat 2108 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_9-12.intra_1-5.dat 2108 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_9-12.intra_1-5mid.dat 2108 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_9-12.intra_2-5.dat 2108 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_9-12.intra_2-6.dat 2108 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_9-12.intra_7-11.dat 2108 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_9-12.intra_8-11.dat 2108 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_9-12.intra_8-12.dat 2108 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_9-12.intra_9-12.dat 2108 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.intra_9-12.pairs.dat 2449 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.pairs.angles_1-2-3.dat 2449 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.pairs.angles_10-11-12.dat 2449 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.pairs.angles_2-3-4.dat 2449 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.pairs.angles_9-10-11.dat 2449 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.pairs.angles_mid.dat 2449 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.pairs.bonds.dat 2449 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.pairs.dihedrals_1-2-3-4.dat 2449 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.pairs.dihedrals_2-3-4-5.dat 2449 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.pairs.dihedrals_8-9-10-11.dat 2449 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.pairs.dihedrals_9-10-11-12.dat 2449 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.pairs.dihedrals_mid.dat 2449 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.pairs.intra_1-4.dat 2449 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.pairs.intra_1-4mid.dat 2449 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.pairs.intra_1-5.dat 2449 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.pairs.intra_1-5mid.dat 2449 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.pairs.intra_2-5.dat 2449 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.pairs.intra_2-6.dat 2449 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.pairs.intra_7-11.dat 2449 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.pairs.intra_8-11.dat 2449 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.pairs.intra_8-12.dat 2449 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.pairs.intra_9-12.dat 2449 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct.pairs.pairs.dat 1860 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct_diag.angles_1-2-3.dat 2511 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct_diag.angles_10-11-12.dat 1736 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct_diag.angles_2-3-4.dat 1984 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct_diag.angles_9-10-11.dat 1612 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct_diag.angles_mid.dat 2139 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct_diag.bonds.dat 2666 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct_diag.dihedrals_1-2-3-4.dat 2325 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct_diag.dihedrals_2-3-4-5.dat 2728 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct_diag.dihedrals_8-9-10-11.dat 3503 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct_diag.dihedrals_9-10-11-12.dat 2108 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct_diag.dihedrals_mid.dat 1860 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct_diag.intra_1-4.dat 1457 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct_diag.intra_1-4mid.dat 2604 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct_diag.intra_1-5.dat 2170 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct_diag.intra_1-5mid.dat 1643 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct_diag.intra_2-5.dat 2356 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct_diag.intra_2-6.dat 2449 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct_diag.intra_7-11.dat 1829 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct_diag.intra_8-11.dat 3038 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct_diag.intra_8-12.dat 2108 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct_diag.intra_9-12.dat 2449 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_soln_struct_diag.pairs.dat 1860 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_struct.Angle.total.angles_1-2-3.dat 2511 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_struct.Angle.total.angles_10-11-12.dat 1736 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_struct.Angle.total.angles_2-3-4.dat 1984 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_struct.Angle.total.angles_9-10-11.dat 1612 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_struct.Angle.total.angles_mid.dat 2139 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_struct.BondStretch.total.bonds.dat 2666 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_struct.Dihedral.total.dihedrals_1-2-3-4.dat 2325 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_struct.Dihedral.total.dihedrals_2-3-4-5.dat 2728 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_struct.Dihedral.total.dihedrals_8-9-10-11.dat 3503 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_struct.Dihedral.total.dihedrals_9-10-11-12.dat 2108 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_struct.Dihedral.total.dihedrals_mid.dat 1860 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_struct.Pair_Interaction.total.intra_1-4.dat 1457 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_struct.Pair_Interaction.total.intra_1-4mid.dat 2604 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_struct.Pair_Interaction.total.intra_1-5.dat 2170 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_struct.Pair_Interaction.total.intra_1-5mid.dat 1643 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_struct.Pair_Interaction.total.intra_2-5.dat 2356 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_struct.Pair_Interaction.total.intra_2-6.dat 2449 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_struct.Pair_Interaction.total.intra_7-11.dat 1829 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_struct.Pair_Interaction.total.intra_8-11.dat 3038 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_struct.Pair_Interaction.total.intra_8-12.dat 2108 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_struct.Pair_Interaction.total.intra_9-12.dat 2449 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/b_struct.Pair_Interaction.total.pairs.dat 58316 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/cgff-polyALA-FM_noH2O.o3463198 651 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/cgpolyALA_opls.gro 2091 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/cgpolyALA_opls.mdp 995 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/cgpolyALA_opls.top 5032 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/cgpolyALA_opls.tpr 1860 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/f_forces.Angle.total.angles_1-2-3.dat 2511 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/f_forces.Angle.total.angles_10-11-12.dat 1736 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/f_forces.Angle.total.angles_2-3-4.dat 1984 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/f_forces.Angle.total.angles_9-10-11.dat 1612 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/f_forces.Angle.total.angles_mid.dat 2139 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/f_forces.BondStretch.total.bonds.dat 2666 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/f_forces.Dihedral.total.dihedrals_1-2-3-4.dat 2325 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/f_forces.Dihedral.total.dihedrals_2-3-4-5.dat 2728 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/f_forces.Dihedral.total.dihedrals_8-9-10-11.dat 3503 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/f_forces.Dihedral.total.dihedrals_9-10-11-12.dat 2108 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/f_forces.Dihedral.total.dihedrals_mid.dat 1860 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/f_forces.Pair_Interaction.total.intra_1-4.dat 1457 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/f_forces.Pair_Interaction.total.intra_1-4mid.dat 2604 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/f_forces.Pair_Interaction.total.intra_1-5.dat 2170 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/f_forces.Pair_Interaction.total.intra_1-5mid.dat 1643 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/f_forces.Pair_Interaction.total.intra_2-5.dat 2356 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/f_forces.Pair_Interaction.total.intra_2-6.dat 2449 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/f_forces.Pair_Interaction.total.intra_7-11.dat 1829 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/f_forces.Pair_Interaction.total.intra_8-11.dat 3038 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/f_forces.Pair_Interaction.total.intra_8-12.dat 2108 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/f_forces.Pair_Interaction.total.intra_9-12.dat 2449 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/f_forces.Pair_Interaction.total.pairs.dat 1860 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/f_struct.Angle.total.angles_1-2-3.dat 2511 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/f_struct.Angle.total.angles_10-11-12.dat 1736 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/f_struct.Angle.total.angles_2-3-4.dat 1984 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/f_struct.Angle.total.angles_9-10-11.dat 1612 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/f_struct.Angle.total.angles_mid.dat 2139 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/f_struct.BondStretch.total.bonds.dat 2666 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/f_struct.Dihedral.total.dihedrals_1-2-3-4.dat 2325 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/f_struct.Dihedral.total.dihedrals_2-3-4-5.dat 2728 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/f_struct.Dihedral.total.dihedrals_8-9-10-11.dat 3503 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/f_struct.Dihedral.total.dihedrals_9-10-11-12.dat 2108 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/f_struct.Dihedral.total.dihedrals_mid.dat 1860 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/f_struct.Pair_Interaction.total.intra_1-4.dat 1457 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/f_struct.Pair_Interaction.total.intra_1-4mid.dat 2604 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/f_struct.Pair_Interaction.total.intra_1-5.dat 2170 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/f_struct.Pair_Interaction.total.intra_1-5mid.dat 1643 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/f_struct.Pair_Interaction.total.intra_2-5.dat 2356 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/f_struct.Pair_Interaction.total.intra_2-6.dat 2449 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/f_struct.Pair_Interaction.total.intra_7-11.dat 1829 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/f_struct.Pair_Interaction.total.intra_8-11.dat 3038 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/f_struct.Pair_Interaction.total.intra_8-12.dat 2108 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/f_struct.Pair_Interaction.total.intra_9-12.dat 2449 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/f_struct.Pair_Interaction.total.pairs.dat 1860 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/g.Angle.total.angles_1-2-3.dat 2511 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/g.Angle.total.angles_10-11-12.dat 1736 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/g.Angle.total.angles_2-3-4.dat 1984 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/g.Angle.total.angles_9-10-11.dat 1612 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/g.Angle.total.angles_mid.dat 2139 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/g.BondStretch.total.bonds.dat 2666 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/g.Dihedral.total.dihedrals_1-2-3-4.dat 2325 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/g.Dihedral.total.dihedrals_2-3-4-5.dat 2728 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/g.Dihedral.total.dihedrals_8-9-10-11.dat 3503 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/g.Dihedral.total.dihedrals_9-10-11-12.dat 2108 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/g.Dihedral.total.dihedrals_mid.dat 1860 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/g.Pair_Interaction.total.intra_1-4.dat 1457 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/g.Pair_Interaction.total.intra_1-4mid.dat 2604 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/g.Pair_Interaction.total.intra_1-5.dat 2170 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/g.Pair_Interaction.total.intra_1-5mid.dat 1643 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/g.Pair_Interaction.total.intra_2-5.dat 2356 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/g.Pair_Interaction.total.intra_2-6.dat 2449 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/g.Pair_Interaction.total.intra_7-11.dat 1829 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/g.Pair_Interaction.total.intra_8-11.dat 3038 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/g.Pair_Interaction.total.intra_8-12.dat 2108 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/g.Pair_Interaction.total.intra_9-12.dat 2449 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/g.Pair_Interaction.total.pairs.dat 1860 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/g_cnt.Angle.total.angles_1-2-3.dat 2511 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/g_cnt.Angle.total.angles_10-11-12.dat 1736 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/g_cnt.Angle.total.angles_2-3-4.dat 1984 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/g_cnt.Angle.total.angles_9-10-11.dat 1612 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/g_cnt.Angle.total.angles_mid.dat 2139 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/g_cnt.BondStretch.total.bonds.dat 2666 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/g_cnt.Dihedral.total.dihedrals_1-2-3-4.dat 2325 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/g_cnt.Dihedral.total.dihedrals_2-3-4-5.dat 2728 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/g_cnt.Dihedral.total.dihedrals_8-9-10-11.dat 3503 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/g_cnt.Dihedral.total.dihedrals_9-10-11-12.dat 2108 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/g_cnt.Dihedral.total.dihedrals_mid.dat 1860 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/g_cnt.Pair_Interaction.total.intra_1-4.dat 1457 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/g_cnt.Pair_Interaction.total.intra_1-4mid.dat 2604 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/g_cnt.Pair_Interaction.total.intra_1-5.dat 2170 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/g_cnt.Pair_Interaction.total.intra_1-5mid.dat 1643 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/g_cnt.Pair_Interaction.total.intra_2-5.dat 2356 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/g_cnt.Pair_Interaction.total.intra_2-6.dat 2449 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/g_cnt.Pair_Interaction.total.intra_7-11.dat 1829 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/g_cnt.Pair_Interaction.total.intra_8-11.dat 3038 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/g_cnt.Pair_Interaction.total.intra_8-12.dat 2108 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/g_cnt.Pair_Interaction.total.intra_9-12.dat 2449 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/g_cnt.Pair_Interaction.total.pairs.dat 109 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/inp.txt 495710 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/log.txt 23300 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/out.total.txt 4954 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/par.txt 2068 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/qsub.sh 2063 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/qsub_xv.sh 25 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/save.FF.dat 105790 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/save.L.dat 292371290 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/save.M.dat 291833407 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/save.M2.dat 292577624 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/save.M_cnt.dat 8 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/save.Nf.dat 106886 11-09-2014 16:49 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/save.b_forces.dat 109789 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/save.b_struct.dat 291833407 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/save.d2M.dat 109506 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/save.d2b.dat 106375 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/save.g.dat 105298 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/save.g_cnt.dat 105298 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/save.rescale.dat 24516 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/printM_MFD/summarize_input.txt 2068 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/qsub.sh 25 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/save.FF.dat 30983 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/save.L.dat 24939783 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/save.M.dat 24854907 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/save.M2.dat 25045388 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/save.M_cnt.dat 8 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/save.Nf.dat 31270 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/save.b_forces.dat 31980 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/save.b_struct.dat 24854907 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/save.d2M.dat 32279 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/save.d2b.dat 31104 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/save.g.dat 30733 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/save.g_cnt.dat 30733 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/save.rescale.dat 25273 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/FOR_RUDZINSKI_NOID_JCTC_2014/bond_angle_dih_pair_1-4_1-5_allendtypes_CONSTdist_REGnb/summarize_input.txt 0 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/ 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/ 1085 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/L.Angle.total.angles.dat 1116 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/L.BondStretch.total.bonds.dat 4681 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/L.IntraMolec_NB_Pair.total.intra_1-4.dat 6851 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/L.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/L.Pair_Interaction.total.pairs.dat 496 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/L_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 713 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/L_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/L_coeff.Pair_Interaction.total.pairs.dat 3769 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/Protein_A.itp 2793 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/S.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/S_CONST.dat 1085 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/b_forces.Angle.total.angles.dat 1116 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/b_forces.BondStretch.total.bonds.dat 4681 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/b_forces.IntraMolec_NB_Pair.total.intra_1-4.dat 6851 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/b_forces.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/b_forces.Pair_Interaction.total.pairs.dat 496 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/b_forces_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 713 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/b_forces_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/b_forces_coeff.Pair_Interaction.total.pairs.dat 1085 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/b_struct.Angle.total.angles.dat 1116 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/b_struct.BondStretch.total.bonds.dat 4681 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/b_struct.IntraMolec_NB_Pair.total.intra_1-4.dat 6851 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/b_struct.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/b_struct.Pair_Interaction.total.pairs.dat 496 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/b_struct_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 713 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/b_struct_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/b_struct_coeff.Pair_Interaction.total.pairs.dat 60733 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/cgff-polyALA-FM_noH2O.o3640497 651 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/cgpolyALA_opls.gro 2091 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/cgpolyALA_opls.mdp 445 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/cgpolyALA_opls.top 4164 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/cgpolyALA_opls.tpr 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/cgsim/ 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/cgsim/Emin/ 338 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/cgsim/Emin/Emin_Commands.txt 4250 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/cgsim/Emin/Protein_A.itp 609 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/cgsim/Emin/cgpolyALA_opls.Emin.gro 585 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/cgsim/Emin/cgpolyALA_opls.gro 5200 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/cgsim/Emin/cgpolyALA_opls.tpr 108 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/cgsim/Emin/mart_polyALA_Equil_POSRES.o3640499 4667 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/cgsim/Emin/mart_trp_zip.Emin.mdp 995 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/cgsim/Emin/mart_trp_zip.top 10323 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/cgsim/Emin/mdout-cgpolyALA_opls.mdp 238 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/cgsim/Emin/qsub.sh 238 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/cgsim/Emin/qsub_xj.sh 2102 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/cgsim/Emin/run_gmx.sh 145685 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/cgsim/Emin/table.xvg 14981 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/cgsim/Emin/table_a0.xvg 66469 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/cgsim/Emin/table_b0.xvg 29922 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/cgsim/Emin/table_d0.xvg 149906 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/cgsim/Emin/tablep.xvg 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/cgsim/Equil/ 4250 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/cgsim/Equil/Protein_A.itp 5200 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/cgsim/Equil/cgpolyALA_opls.Equil.tpr 897 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/cgsim/Equil/cgpolyALA_opls.confout.gro 108 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/cgsim/Equil/mart_polyALA_Equil_POSRES.o3640501 4671 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/cgsim/Equil/mart_trp_zip.Equil.mdp 995 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/cgsim/Equil/mart_trp_zip.top 10325 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/cgsim/Equil/mdout-cgpolyALA_opls.mdp 238 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/cgsim/Equil/qsub.sh 238 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/cgsim/Equil/qsub_xj.sh 2131 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/cgsim/Equil/run_gmx.sh 5356 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/cgsim/Equil/state.cpt 145685 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/cgsim/Equil/table.xvg 14981 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/cgsim/Equil/table_a0.xvg 66469 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/cgsim/Equil/table_b0.xvg 29922 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/cgsim/Equil/table_d0.xvg 149906 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/cgsim/Equil/tablep.xvg 0 11-09-2014 16:50 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ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/cgsim/Prod_run/bonds.xvg 8436 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/cgsim/Prod_run/bonds_1-4_all.xvg 10309 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/cgsim/Prod_run/bonds_1-5_all.xvg 1639 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/cgsim/Prod_run/calc_dist.sh 2106 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/cgsim/Prod_run/calc_dist_all1-4bonds.sh 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/cgsim/Prod_run/cgff/ 3769 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/cgsim/Prod_run/cgff/Protein_A.itp 651 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/cgsim/Prod_run/cgff/cgpolyALA_opls.gro 2091 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/cgsim/Prod_run/cgff/cgpolyALA_opls.mdp 445 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/cgsim/Prod_run/cgff/cgpolyALA_opls.top 4164 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/cgsim/Prod_run/cgff/cgpolyALA_opls.tpr 82 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/cgsim/Prod_run/cgff/inp.txt 1626 11-09-2014 16:50 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ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/cgsim/Prod_run/table.xvg 14981 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/cgsim/Prod_run/table_a0.xvg 66469 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/cgsim/Prod_run/table_b0.xvg 29922 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/cgsim/Prod_run/table_d0.xvg 149906 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/cgsim/Prod_run/tablep.xvg 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/edit/ 737 11-09-2014 16:50 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11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/edit/f_forces.BondStretch.total.bonds.dat 22351 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/edit/f_forces.Dihedral.total.dihedrals.dat 4681 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/edit/f_forces.IntraMolec_NB_Pair.total.intra_1-4.dat 6851 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/edit/f_forces.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/edit/f_forces.Pair_Interaction.total.pairs.dat 5921 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/edit/f_pairs.dat 799 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/edit/run.make_gmx4_table.sh 145685 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/edit/table.xvg 14981 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/edit/table_a0.xvg 66469 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/edit/table_b0.xvg 29922 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/edit/table_d0.xvg 149906 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/edit/tablep.xvg 146845 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/edit/tablep_1-4.xvg 145655 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/edit/tablep_1-5.xvg 1085 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/f_forces.Angle.total.angles.dat 1116 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/f_forces.BondStretch.total.bonds.dat 22351 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/f_forces.Dihedral.total.dihedrals.dat 4681 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/f_forces.IntraMolec_NB_Pair.total.intra_1-4.dat 6851 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/f_forces.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/f_forces.Pair_Interaction.total.pairs.dat 496 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/f_forces_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 713 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/f_forces_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/f_forces_coeff.Pair_Interaction.total.pairs.dat 1085 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/f_struct.Angle.total.angles.dat 1116 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/f_struct.BondStretch.total.bonds.dat 22351 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/f_struct.Dihedral.total.dihedrals.dat 4681 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/f_struct.IntraMolec_NB_Pair.total.intra_1-4.dat 6851 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/f_struct.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/f_struct.Pair_Interaction.total.pairs.dat 496 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/f_struct_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 713 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/f_struct_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/f_struct_coeff.Pair_Interaction.total.pairs.dat 1085 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/g.Angle.total.angles.dat 1116 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/g.BondStretch.total.bonds.dat 4681 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/g.IntraMolec_NB_Pair.total.intra_1-4.dat 6851 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/g.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/g.Pair_Interaction.total.pairs.dat 1085 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/g_cnt.Angle.total.angles.dat 1116 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/g_cnt.BondStretch.total.bonds.dat 4681 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/g_cnt.IntraMolec_NB_Pair.total.intra_1-4.dat 6851 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/g_cnt.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/g_cnt.Pair_Interaction.total.pairs.dat 496 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/g_cnt_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 713 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/g_cnt_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/g_cnt_coeff.Pair_Interaction.total.pairs.dat 496 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/g_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 713 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/g_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/g_coeff.Pair_Interaction.total.pairs.dat 102 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/inp.txt 31970 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/log.txt 4823 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/out.total.txt 1697 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/par.txt 1711 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/qsub.sh 25 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/save.FF.dat 6577 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/save.L.dat 1130005 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/save.M.dat 1120925 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/save.M2.dat 1154523 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/save.M_cnt.dat 8 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/save.Nf.dat 6669 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/save.b_forces.dat 6782 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/save.b_struct.dat 1120933 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/save.d2M.dat 7036 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/save.d2b.dat 6621 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/save.g.dat 6532 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/save.g_cnt.dat 6532 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/save.rescale.dat 6203 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5/summarize_input.txt 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/ 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/ 1116 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/L.BondStretch.total.bonds.dat 4681 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/L.IntraMolec_NB_Pair.total.intra_1-4.dat 6851 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/L.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/L.Pair_Interaction.total.pairs.dat 496 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/L_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 713 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/L_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/L_coeff.Pair_Interaction.total.pairs.dat 3781 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/Protein_A.itp 2058 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/S.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/S_CONST.dat 1116 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/b_forces.BondStretch.total.bonds.dat 4681 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/b_forces.IntraMolec_NB_Pair.total.intra_1-4.dat 6851 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/b_forces.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/b_forces.Pair_Interaction.total.pairs.dat 496 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/b_forces_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 713 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/b_forces_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/b_forces_coeff.Pair_Interaction.total.pairs.dat 1116 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/b_struct.BondStretch.total.bonds.dat 4681 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/b_struct.IntraMolec_NB_Pair.total.intra_1-4.dat 6851 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/b_struct.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/b_struct.Pair_Interaction.total.pairs.dat 496 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/b_struct_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 713 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/b_struct_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/b_struct_coeff.Pair_Interaction.total.pairs.dat 115832 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgff-polyALA-FM_noH2O.o3851268 651 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgpolyALA_opls.gro 2091 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgpolyALA_opls.mdp 445 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgpolyALA_opls.top 5020 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgpolyALA_opls.tpr 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/ 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Emin/ 338 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Emin/Emin_Commands.txt 4250 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Emin/Protein_A.itp 609 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Emin/cgpolyALA_opls.Emin.gro 585 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Emin/cgpolyALA_opls.gro 5200 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Emin/cgpolyALA_opls.tpr 39 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Emin/mart_polyALA_Equil_POSRES.o3851321 4667 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Emin/mart_trp_zip.Emin.mdp 995 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Emin/mart_trp_zip.top 10323 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Emin/mdout-cgpolyALA_opls.mdp 238 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Emin/qsub_cgsim_Emin.sh 2100 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Emin/run_gmx.sh 145682 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Emin/table.xvg 7495 11-09-2014 16:50 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ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Equil/Protein_A.itp 5200 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Equil/cgpolyALA_opls.Equil.tpr 897 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Equil/cgpolyALA_opls.confout.gro 39 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Equil/mart_polyALA_Equil_POSRES.o3851361 4671 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Equil/mart_trp_zip.Equil.mdp 995 11-09-2014 16:50 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ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/ 4250 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/Protein_A.itp 59000680 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/Rg.xvg 1307 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/Tick_Marks_Rg_Q_scatter.m 1337 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/Tick_Marks_Rg_rmsd_scatter.m 4140 11-09-2014 16:50 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ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/calc_dist_all1-4bonds.sh 1653 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/calc_dist_old.sh 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/cgff/ 3769 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/cgff/Protein_A.itp 651 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/cgff/cgpolyALA_opls.gro 2091 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/cgff/cgpolyALA_opls.mdp 445 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/cgff/cgpolyALA_opls.top 4164 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/cgff/cgpolyALA_opls.tpr 80 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/cgff/inp.txt 1816 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/cgff/par.txt 2068 11-09-2014 16:50 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ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/f_forces_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 713 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/f_forces_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/f_forces_coeff.Pair_Interaction.total.pairs.dat 1116 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/f_struct.BondStretch.total.bonds.dat 22351 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/f_struct.Dihedral.total.dihedrals.dat 4681 11-09-2014 16:50 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11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/f_struct_coeff.Pair_Interaction.total.pairs.dat 1116 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/g.BondStretch.total.bonds.dat 4681 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/g.IntraMolec_NB_Pair.total.intra_1-4.dat 6851 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/g.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/g.Pair_Interaction.total.pairs.dat 1116 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/g_cnt.BondStretch.total.bonds.dat 4681 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/g_cnt.IntraMolec_NB_Pair.total.intra_1-4.dat 6851 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/g_cnt.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/g_cnt.Pair_Interaction.total.pairs.dat 496 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/g_cnt_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 713 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/g_cnt_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/g_cnt_coeff.Pair_Interaction.total.pairs.dat 496 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/g_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 713 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/g_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/g_coeff.Pair_Interaction.total.pairs.dat 105 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/inp.txt 22187 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/log.txt 4101 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/out.total.txt 1702 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/par.txt 2068 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/qsub.sh 25 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/save.FF.dat 4408 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/save.L.dat 517130 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/save.M.dat 513533 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/save.M2.dat 533475 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/save.M_cnt.dat 8 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/save.Nf.dat 4458 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/save.b_forces.dat 4521 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/save.b_struct.dat 513541 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/save.d2M.dat 4760 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/save.d2b.dat 4489 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/save.g.dat 4423 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/save.g_cnt.dat 4423 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/save.rescale.dat 5837 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/summarize_input.txt 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/ 1120925 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/M2.dat 3769 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/Protein_A.itp 2352 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/S.dat 2352 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/S_CONST.dat 493 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/bAA.angles.dat 595 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/bAA.bonds.dat 51 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/bAA.dihedrals.dat 187 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/bAA.intra_1-4.dat 238 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/bAA.intra_1-5.dat 340 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/bAA.pairs.dat 493 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/b_soln_err.angles.dat 595 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/b_soln_err.bonds.dat 51 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/b_soln_err.dihedrals.dat 187 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/b_soln_err.intra_1-4.dat 238 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/b_soln_err.intra_1-5.dat 340 11-09-2014 16:50 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ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/cgsim/Prod_run/cgpolyALA_opls.confout.gro 585 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/cgsim/Prod_run/cgpolyALA_opls.gro 5200 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/cgsim/Prod_run/cgpolyALA_opls.tpr 1311 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/cgsim/Prod_run/dihedrals.xvg 19890021 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/cgsim/Prod_run/distance.xvg 19890513 11-09-2014 16:50 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ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/f_forces.BondStretch.total.bonds.dat 22351 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/f_forces.Dihedral.total.dihedrals.dat 3131 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/f_forces.IntraMolec_NB_Pair.total.intra_1-4.dat 4061 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/f_forces.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/f_forces.Pair_Interaction.total.pairs.dat 341 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/f_forces_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 434 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/f_forces_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/f_forces_coeff.Pair_Interaction.total.pairs.dat 899 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/f_struct.Angle.total.angles.dat 1085 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/f_struct.BondStretch.total.bonds.dat 22351 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/f_struct.Dihedral.total.dihedrals.dat 3131 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/f_struct.IntraMolec_NB_Pair.total.intra_1-4.dat 4061 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/f_struct.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/f_struct.Pair_Interaction.total.pairs.dat 341 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/f_struct_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 434 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/f_struct_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/f_struct_coeff.Pair_Interaction.total.pairs.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/force_files/ 1085 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/force_files/f_forces.Angle.total.angles.dat 1116 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/force_files/f_forces.BondStretch.total.bonds.dat 22351 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/force_files/f_forces.Dihedral.total.dihedrals.dat 4681 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/force_files/f_forces.IntraMolec_NB_Pair.total.intra_1-4.dat 6851 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/force_files/f_forces.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/force_files/f_forces.Pair_Interaction.total.pairs.dat 33 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/force_files/f_forces_coeff.Dihedral.total.dihedrals.dat 496 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/force_files/f_forces_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 713 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/force_files/f_forces_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/force_files/f_forces_coeff.Pair_Interaction.total.pairs.dat 527 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/force_files/force_imin1.angles.dat 399 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/force_files/force_imin1.bonds.dat 60 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/force_files/force_imin1.dihedrals.dat 147 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/force_files/force_imin1.intra_1-4.dat 198 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/force_files/force_imin1.intra_1-5.dat 175 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/force_files/force_imin1.pairs.dat 1383 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/force_files/make_force_file.py 514 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/force_i.angles.dat 616 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/force_i.bonds.dat 71 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/force_i.dihedrals.dat 208 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/force_i.intra_1-4.dat 259 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/force_i.intra_1-5.dat 361 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/force_i.pairs.dat 254 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/force_i_scale.angles.dat 382 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/force_i_scale.bonds.dat 35 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/force_i_scale.dihedrals.dat 123 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/force_i_scale.intra_1-4.dat 155 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/force_i_scale.intra_1-5.dat 204 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/force_i_scale.pairs.dat 527 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/force_imin1.angles.dat 399 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/force_imin1.bonds.dat 60 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/force_imin1.dihedrals.dat 147 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/force_imin1.intra_1-4.dat 198 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/force_imin1.intra_1-5.dat 175 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/force_imin1.pairs.dat 514 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/force_imin1_check.angles.dat 616 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/force_imin1_check.bonds.dat 71 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/force_imin1_check.dihedrals.dat 208 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/force_imin1_check.intra_1-4.dat 259 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/force_imin1_check.intra_1-5.dat 361 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/force_imin1_check.pairs.dat 107 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/inp.txt 31673 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/log.txt 2993 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/out.total.txt 1866 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/par.txt 2068 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/qsub_cgff_iter.sh 25 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/save.FF.dat 6577 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/save.L.dat 1126970 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/save.M.dat 1120925 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/save.M2.dat 1149155 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/save.M_cnt.dat 8 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/save.Nf.dat 6665 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/save.b_forces.dat 6781 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/save.b_struct.dat 1120933 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/save.d2M.dat 7038 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/save.d2b.dat 6622 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/save.g.dat 6533 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/save.g_cnt.dat 6532 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/save.rescale.dat 6553 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/summarize_input.txt 6073 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/iter_dodecapeptide_lambda_BIbond-angleref_CGdihref.sh 275 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_analdih_pair_1-4_1-5_BIbond-angle_noFMangle/qsub.sh 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih/ 1085 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih/L.Angle.total.angles.dat 1116 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih/L.BondStretch.total.bonds.dat 6200 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih/L.Dihedral.total.dihedrals.dat 620 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih/L_coeff.Dihedral.total.dihedrals.dat 3787 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih/Protein_A.itp 1911 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih/S.dat 1912 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih/S_CONST.dat 1085 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih/b_forces.Angle.total.angles.dat 1116 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih/b_forces.BondStretch.total.bonds.dat 6200 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih/b_forces.Dihedral.total.dihedrals.dat 620 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih/b_forces_coeff.Dihedral.total.dihedrals.dat 1085 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih/b_struct.Angle.total.angles.dat 1116 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih/b_struct.BondStretch.total.bonds.dat 6200 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih/b_struct.Dihedral.total.dihedrals.dat 620 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih/b_struct_coeff.Dihedral.total.dihedrals.dat 58316 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih/cgff-polyALA-FM_noH2O.o3914968 651 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih/cgpolyALA_opls.gro 2091 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih/cgpolyALA_opls.mdp 445 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih/cgpolyALA_opls.top 4912 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih/cgpolyALA_opls.tpr 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih/cgsim/ 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih/cgsim/Emin/ 338 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih/cgsim/Emin/Emin_Commands.txt 4269 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih/cgsim/Emin/Protein_A.itp 609 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih/cgsim/Emin/cgpolyALA_opls.Emin.gro 585 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih/cgsim/Emin/cgpolyALA_opls.gro 5148 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih/cgsim/Emin/cgpolyALA_opls.tpr 38 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih/cgsim/Emin/mart_polyALA_Equil_POSRES.o3915314 4671 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih/cgsim/Emin/mart_trp_zip.Emin.mdp 995 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih/cgsim/Emin/mart_trp_zip.top 10327 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih/cgsim/Emin/mdout-cgpolyALA_opls.mdp 238 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih/cgsim/Emin/qsub_cgsim_Emin.sh 2064 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih/cgsim/Emin/run_gmx.sh 14982 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih/cgsim/Emin/table_a0.xvg 66469 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih/cgsim/Emin/table_b0.xvg 29857 11-09-2014 16:50 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ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/ 1085 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/L.Angle.total.angles.dat 1116 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/L.BondStretch.total.bonds.dat 6200 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/L.Dihedral.total.dihedrals.dat 4681 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/L.IntraMolec_NB_Pair.total.intra_1-4.dat 620 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/L_coeff.Dihedral.total.dihedrals.dat 496 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/L_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 3777 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/Protein_A.itp 2247 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/S.dat 2248 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/S_CONST.dat 1085 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/b_forces.Angle.total.angles.dat 1116 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/b_forces.BondStretch.total.bonds.dat 6200 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/b_forces.Dihedral.total.dihedrals.dat 4681 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/b_forces.IntraMolec_NB_Pair.total.intra_1-4.dat 620 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/b_forces_coeff.Dihedral.total.dihedrals.dat 496 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/b_forces_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 1085 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/b_struct.Angle.total.angles.dat 1116 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/b_struct.BondStretch.total.bonds.dat 6200 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/b_struct.Dihedral.total.dihedrals.dat 4681 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/b_struct.IntraMolec_NB_Pair.total.intra_1-4.dat 620 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/b_struct_coeff.Dihedral.total.dihedrals.dat 496 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/b_struct_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 58785 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/cgff-polyALA-FM_noH2O.o3915318 651 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/cgpolyALA_opls.gro 2091 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/cgpolyALA_opls.mdp 445 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/cgpolyALA_opls.top 5128 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/cgpolyALA_opls.tpr 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/cgsim/ 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/cgsim/Emin/ 338 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/cgsim/Emin/Emin_Commands.txt 4259 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/cgsim/Emin/Protein_A.itp 609 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/cgsim/Emin/cgpolyALA_opls.Emin.gro 585 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/cgsim/Emin/cgpolyALA_opls.gro 5292 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/cgsim/Emin/cgpolyALA_opls.tpr 38 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/cgsim/Emin/mart_polyALA_Equil_POSRES.o3918427 4666 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/cgsim/Emin/mart_trp_zip.Emin.mdp 995 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/cgsim/Emin/mart_trp_zip.top 10323 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/cgsim/Emin/mdout-cgpolyALA_opls.mdp 238 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/cgsim/Emin/qsub_cgsim_Emin.sh 2064 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/cgsim/Emin/run_gmx.sh 145699 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/cgsim/Emin/table.xvg 14980 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/cgsim/Emin/table_a0.xvg 66469 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/cgsim/Emin/table_b0.xvg 29842 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/cgsim/Emin/table_d0.xvg 145699 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/cgsim/Emin/tablep.xvg 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/cgsim/Equil/ 4259 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/cgsim/Equil/Protein_A.itp 4671 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/cgsim/Equil/mart_trp_zip.Equil.mdp 995 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/cgsim/Equil/mart_trp_zip.top 238 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/cgsim/Equil/qsub_cgsim_Equil.sh 2129 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/cgsim/Equil/run_gmx.sh 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/cgsim/Prod_run/ 4259 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/cgsim/Prod_run/Protein_A.itp 1307 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/cgsim/Prod_run/Tick_Marks_Rg_Q_scatter.m 1337 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/cgsim/Prod_run/Tick_Marks_Rg_rmsd_scatter.m 1816 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/cgsim/Prod_run/calc_dist.sh 2106 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/cgsim/Prod_run/calc_dist_all1-4bonds.sh 1653 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/cgsim/Prod_run/calc_dist_old.sh 4924 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/cgsim/Prod_run/cgpolyALA_opls.4excl.tpr 585 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/cgsim/Prod_run/cgpolyALA_opls.gro 2049 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/cgsim/Prod_run/helicity.py 1745 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/cgsim/Prod_run/index.ndx 558 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/cgsim/Prod_run/index_dist.ndx 524 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/cgsim/Prod_run/index_dist_all1-4bonds.ndx 4661 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/cgsim/Prod_run/mart_trp_zip.mdp 995 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/cgsim/Prod_run/mart_trp_zip.top 239 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/cgsim/Prod_run/qsub_cgsim_NVT.sh 2115 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/cgsim/Prod_run/run_gmx.sh 363 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/cgsim/Prod_run/scatter.py 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/edit/ 4681 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/edit/f_1-4.dat 1085 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/edit/f_angle.dat 1116 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/edit/f_bond.dat 9916 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/edit/f_dih.dat 1085 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/edit/f_forces.Angle.total.angles.dat 1116 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/edit/f_forces.BondStretch.total.bonds.dat 4681 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/edit/f_forces.IntraMolec_NB_Pair.total.intra_1-4.dat 807 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/edit/run.make_gmx4_table.sh 14980 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/edit/table_a0.xvg 66469 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/edit/table_b0.xvg 29842 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/edit/table_d0.xvg 145699 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/edit/tablep.xvg 1085 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/f_forces.Angle.total.angles.dat 1116 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/f_forces.BondStretch.total.bonds.dat 6200 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/f_forces.Dihedral.total.dihedrals.dat 4681 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/f_forces.IntraMolec_NB_Pair.total.intra_1-4.dat 620 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/f_forces_coeff.Dihedral.total.dihedrals.dat 496 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/f_forces_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 1085 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/f_struct.Angle.total.angles.dat 1116 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/f_struct.BondStretch.total.bonds.dat 6200 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/f_struct.Dihedral.total.dihedrals.dat 4681 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/f_struct.IntraMolec_NB_Pair.total.intra_1-4.dat 620 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/f_struct_coeff.Dihedral.total.dihedrals.dat 496 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/f_struct_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 1085 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/g.Angle.total.angles.dat 1116 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/g.BondStretch.total.bonds.dat 6200 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/g.Dihedral.total.dihedrals.dat 4681 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/g.IntraMolec_NB_Pair.total.intra_1-4.dat 1085 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/g_cnt.Angle.total.angles.dat 1116 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/g_cnt.BondStretch.total.bonds.dat 6200 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/g_cnt.Dihedral.total.dihedrals.dat 4681 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/g_cnt.IntraMolec_NB_Pair.total.intra_1-4.dat 620 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/g_cnt_coeff.Dihedral.total.dihedrals.dat 496 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/g_cnt_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 620 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/g_coeff.Dihedral.total.dihedrals.dat 496 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/g_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 102 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/inp.txt 27754 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/log.txt 2764 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/out.total.txt 1732 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/par.txt 2068 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/qsub.sh 25 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/save.FF.dat 5684 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/save.L.dat 844199 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/save.M.dat 835164 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/save.M2.dat 855673 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/save.M_cnt.dat 8 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/save.Nf.dat 5764 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/save.b_forces.dat 5854 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/save.b_struct.dat 835164 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/save.d2M.dat 6078 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/save.d2b.dat 5717 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/save.g.dat 5633 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/save.g_cnt.dat 5633 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/save.rescale.dat 4596 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4/summarize_input.txt 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/ 1085 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/L.Angle.total.angles.dat 1116 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/L.BondStretch.total.bonds.dat 6200 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/L.Dihedral.total.dihedrals.dat 4681 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/L.IntraMolec_NB_Pair.total.intra_1-4.dat 6851 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/L.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/L_coeff.Dihedral.total.dihedrals.dat 496 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/L_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 713 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/L_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 3769 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/Protein_A.itp 2730 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/S.dat 2731 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/S_CONST.dat 1085 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/b_forces.Angle.total.angles.dat 1116 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/b_forces.BondStretch.total.bonds.dat 6200 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/b_forces.Dihedral.total.dihedrals.dat 4681 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/b_forces.IntraMolec_NB_Pair.total.intra_1-4.dat 6851 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/b_forces.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/b_forces_coeff.Dihedral.total.dihedrals.dat 496 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/b_forces_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 713 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/b_forces_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 1085 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/b_struct.Angle.total.angles.dat 1116 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/b_struct.BondStretch.total.bonds.dat 6200 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/b_struct.Dihedral.total.dihedrals.dat 4681 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/b_struct.IntraMolec_NB_Pair.total.intra_1-4.dat 6851 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/b_struct.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/b_struct_coeff.Dihedral.total.dihedrals.dat 496 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/b_struct_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 713 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/b_struct_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 58316 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/cgff-polyALA-FM_noH2O.o3915321 651 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/cgpolyALA_opls.gro 2091 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/cgpolyALA_opls.mdp 445 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/cgpolyALA_opls.top 5288 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/cgpolyALA_opls.tpr 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/cgsim/ 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/cgsim/Emin/ 338 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/cgsim/Emin/Emin_Commands.txt 4269 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/cgsim/Emin/Protein_A.itp 585 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/cgsim/Emin/cgpolyALA_opls.gro 4671 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/cgsim/Emin/mart_trp_zip.Emin.mdp 995 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/cgsim/Emin/mart_trp_zip.top 238 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/cgsim/Emin/qsub_cgsim_Emin.sh 2064 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/cgsim/Emin/run_gmx.sh 14982 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/cgsim/Emin/table_a0.xvg 66469 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/cgsim/Emin/table_b0.xvg 29857 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/cgsim/Emin/table_d0.xvg 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/cgsim/Equil/ 4250 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/cgsim/Equil/Protein_A.itp 4671 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/cgsim/Equil/mart_trp_zip.Equil.mdp 995 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/cgsim/Equil/mart_trp_zip.top 238 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/cgsim/Equil/qsub_cgsim_Equil.sh 2129 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/cgsim/Equil/run_gmx.sh 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/cgsim/Prod_run/ 4250 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/cgsim/Prod_run/Protein_A.itp 1307 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/cgsim/Prod_run/Tick_Marks_Rg_Q_scatter.m 1337 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/cgsim/Prod_run/Tick_Marks_Rg_rmsd_scatter.m 1806 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/cgsim/Prod_run/calc_dist.sh 2106 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/cgsim/Prod_run/calc_dist_all1-4bonds.sh 1653 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/cgsim/Prod_run/calc_dist_old.sh 585 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/cgsim/Prod_run/cgpolyALA_opls.gro 2049 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/cgsim/Prod_run/helicity.py 1745 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/cgsim/Prod_run/index.ndx 558 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/cgsim/Prod_run/index_dist.ndx 524 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/cgsim/Prod_run/index_dist_all1-4bonds.ndx 4661 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/cgsim/Prod_run/mart_trp_zip.mdp 995 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/cgsim/Prod_run/mart_trp_zip.top 239 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/cgsim/Prod_run/qsub_cgsim_NVT.sh 2115 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/cgsim/Prod_run/run_gmx.sh 363 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/cgsim/Prod_run/scatter.py 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/edit/ 1085 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/edit/f_1-4.dat 1085 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/edit/f_angle.dat 1116 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/edit/f_bond.dat 10211 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/edit/f_dih.dat 807 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/edit/run.make_gmx4_table.sh 14982 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/edit/table_a0.xvg 66469 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/edit/table_b0.xvg 29857 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/edit/table_d0.xvg 1085 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/f_forces.Angle.total.angles.dat 1116 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/f_forces.BondStretch.total.bonds.dat 6200 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/f_forces.Dihedral.total.dihedrals.dat 4681 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/f_forces.IntraMolec_NB_Pair.total.intra_1-4.dat 6851 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/f_forces.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/f_forces_coeff.Dihedral.total.dihedrals.dat 496 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/f_forces_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 713 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/f_forces_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 1085 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/f_struct.Angle.total.angles.dat 1116 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/f_struct.BondStretch.total.bonds.dat 6200 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/f_struct.Dihedral.total.dihedrals.dat 4681 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/f_struct.IntraMolec_NB_Pair.total.intra_1-4.dat 6851 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/f_struct.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/f_struct_coeff.Dihedral.total.dihedrals.dat 496 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/f_struct_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 713 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/f_struct_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 1085 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/g.Angle.total.angles.dat 1116 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/g.BondStretch.total.bonds.dat 6200 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/g.Dihedral.total.dihedrals.dat 4681 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/g.IntraMolec_NB_Pair.total.intra_1-4.dat 6851 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/g.IntraMolec_NB_Pair.total.intra_1-5.dat 1085 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/g_cnt.Angle.total.angles.dat 1116 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/g_cnt.BondStretch.total.bonds.dat 6200 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/g_cnt.Dihedral.total.dihedrals.dat 4681 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/g_cnt.IntraMolec_NB_Pair.total.intra_1-4.dat 6851 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/g_cnt.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/g_cnt_coeff.Dihedral.total.dihedrals.dat 496 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/g_cnt_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 713 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/g_cnt_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/g_coeff.Dihedral.total.dihedrals.dat 496 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/g_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 713 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/g_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 102 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/inp.txt 33738 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/log.txt 10358 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/mdout.mdp 3462 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/out.total.txt 1729 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/par.txt 2068 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/qsub.sh 25 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/save.FF.dat 6938 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/save.L.dat 1260340 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/save.M.dat 1248357 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/save.M2.dat 1278771 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/save.M_cnt.dat 8 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/save.Nf.dat 7042 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/save.b_forces.dat 7159 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/save.b_struct.dat 1248357 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/save.d2M.dat 7401 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/save.d2b.dat 6986 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/save.g.dat 6889 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/save.g_cnt.dat 6889 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/save.rescale.dat 5358 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_1-4_1-5/summarize_input.txt 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/ 1085 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/L.Angle.total.angles.dat 1116 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/L.BondStretch.total.bonds.dat 6200 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/L.Dihedral.total.dihedrals.dat 11811 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/L.Pair_Interaction.total.pairs.dat 620 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/L_coeff.Dihedral.total.dihedrals.dat 1209 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/L_coeff.Pair_Interaction.total.pairs.dat 3787 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/Protein_A.itp 2730 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/S.dat 2731 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/S_CONST.dat 1085 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/b_forces.Angle.total.angles.dat 1116 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/b_forces.BondStretch.total.bonds.dat 6200 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/b_forces.Dihedral.total.dihedrals.dat 11811 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/b_forces.Pair_Interaction.total.pairs.dat 620 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/b_forces_coeff.Dihedral.total.dihedrals.dat 1209 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/b_forces_coeff.Pair_Interaction.total.pairs.dat 1085 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/b_struct.Angle.total.angles.dat 1116 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/b_struct.BondStretch.total.bonds.dat 6200 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/b_struct.Dihedral.total.dihedrals.dat 11811 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/b_struct.Pair_Interaction.total.pairs.dat 620 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/b_struct_coeff.Dihedral.total.dihedrals.dat 1209 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/b_struct_coeff.Pair_Interaction.total.pairs.dat 58316 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/cgff-polyALA-FM_noH2O.o3914960 651 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/cgpolyALA_opls.gro 2091 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/cgpolyALA_opls.mdp 445 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/cgpolyALA_opls.top 4912 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/cgpolyALA_opls.tpr 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/cgsim/ 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/cgsim/Emin/ 338 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/cgsim/Emin/Emin_Commands.txt 4268 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/cgsim/Emin/Protein_A.itp 609 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/cgsim/Emin/cgpolyALA_opls.Emin.gro 585 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/cgsim/Emin/cgpolyALA_opls.gro 4788 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/cgsim/Emin/cgpolyALA_opls.tpr 38 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/cgsim/Emin/mart_polyALA_Equil_POSRES.o3915312 4666 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/cgsim/Emin/mart_trp_zip.Emin.mdp 995 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/cgsim/Emin/mart_trp_zip.top 10323 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/cgsim/Emin/mdout-cgpolyALA_opls.mdp 238 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/cgsim/Emin/qsub_cgsim_Emin.sh 2081 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/cgsim/Emin/run_gmx.sh 145907 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/cgsim/Emin/table.xvg 14982 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/cgsim/Emin/table_a0.xvg 66469 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/cgsim/Emin/table_b0.xvg 29882 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/cgsim/Emin/table_d0.xvg 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/cgsim/Equil/ 4268 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/cgsim/Equil/Protein_A.itp 4788 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/cgsim/Equil/cgpolyALA_opls.Equil.tpr 897 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/cgsim/Equil/cgpolyALA_opls.confout.gro 39 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/cgsim/Equil/mart_polyALA_Equil_POSRES.o3915448 4671 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/cgsim/Equil/mart_trp_zip.Equil.mdp 995 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/cgsim/Equil/mart_trp_zip.top 10325 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/cgsim/Equil/mdout-cgpolyALA_opls.mdp 238 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/cgsim/Equil/qsub_cgsim_Equil.sh 2110 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/cgsim/Equil/run_gmx.sh 5316 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/cgsim/Equil/state.cpt 145907 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/cgsim/Equil/table.xvg 14982 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/cgsim/Equil/table_a0.xvg 66469 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/cgsim/Equil/table_b0.xvg 29882 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/cgsim/Equil/table_d0.xvg 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/cgsim/Prod_run/ 4268 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/cgsim/Prod_run/Protein_A.itp 1307 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/cgsim/Prod_run/Tick_Marks_Rg_Q_scatter.m 1337 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/cgsim/Prod_run/Tick_Marks_Rg_rmsd_scatter.m 1816 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/cgsim/Prod_run/calc_dist.sh 2106 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/cgsim/Prod_run/calc_dist_all1-4bonds.sh 1653 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/cgsim/Prod_run/calc_dist_old.sh 4924 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/cgsim/Prod_run/cgpolyALA_opls.4excl.tpr 897 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/cgsim/Prod_run/cgpolyALA_opls.confout.gro 585 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/cgsim/Prod_run/cgpolyALA_opls.gro 4788 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/cgsim/Prod_run/cgpolyALA_opls.tpr 2049 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/cgsim/Prod_run/helicity.py 1745 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/cgsim/Prod_run/index.ndx 558 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/cgsim/Prod_run/index_dist.ndx 524 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/cgsim/Prod_run/index_dist_all1-4bonds.ndx 38 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/cgsim/Prod_run/mart_polyALA_Equil_PRODRUN.o3918528 4661 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/cgsim/Prod_run/mart_trp_zip.mdp 995 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/cgsim/Prod_run/mart_trp_zip.top 10317 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/cgsim/Prod_run/mdout-cgpolyALA_opls.mdp 239 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/cgsim/Prod_run/qsub_cgsim_NVT.sh 2096 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/cgsim/Prod_run/run_gmx.sh 363 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/cgsim/Prod_run/scatter.py 5308 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/cgsim/Prod_run/state.cpt 5308 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/cgsim/Prod_run/state_prev.cpt 145907 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/cgsim/Prod_run/table.xvg 14982 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/cgsim/Prod_run/table_a0.xvg 66469 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/cgsim/Prod_run/table_b0.xvg 29882 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/cgsim/Prod_run/table_d0.xvg 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/edit/ 1085 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/edit/f_angle.dat 1116 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/edit/f_bond.dat 10088 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/edit/f_dih.dat 1085 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/edit/f_forces.Angle.total.angles.dat 1116 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/edit/f_forces.BondStretch.total.bonds.dat 11811 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/edit/f_forces.Pair_Interaction.total.pairs.dat 11811 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/edit/f_pairs.dat 807 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/edit/run.make_gmx4_table.sh 145907 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/edit/table.xvg 14982 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/edit/table_a0.xvg 66469 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/edit/table_b0.xvg 29882 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/edit/table_d0.xvg 1085 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/f_forces.Angle.total.angles.dat 1116 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/f_forces.BondStretch.total.bonds.dat 6200 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/f_forces.Dihedral.total.dihedrals.dat 11811 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/f_forces.Pair_Interaction.total.pairs.dat 620 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/f_forces_coeff.Dihedral.total.dihedrals.dat 1209 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/f_forces_coeff.Pair_Interaction.total.pairs.dat 1085 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/f_struct.Angle.total.angles.dat 1116 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/f_struct.BondStretch.total.bonds.dat 6200 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/f_struct.Dihedral.total.dihedrals.dat 11811 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/f_struct.Pair_Interaction.total.pairs.dat 620 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/f_struct_coeff.Dihedral.total.dihedrals.dat 1209 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/f_struct_coeff.Pair_Interaction.total.pairs.dat 1085 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/g.Angle.total.angles.dat 1116 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/g.BondStretch.total.bonds.dat 6200 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/g.Dihedral.total.dihedrals.dat 11811 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/g.Pair_Interaction.total.pairs.dat 1085 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/g_cnt.Angle.total.angles.dat 1116 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/g_cnt.BondStretch.total.bonds.dat 6200 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/g_cnt.Dihedral.total.dihedrals.dat 11811 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/g_cnt.Pair_Interaction.total.pairs.dat 620 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/g_cnt_coeff.Dihedral.total.dihedrals.dat 1209 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/g_cnt_coeff.Pair_Interaction.total.pairs.dat 620 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/g_coeff.Dihedral.total.dihedrals.dat 1209 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/g_coeff.Pair_Interaction.total.pairs.dat 102 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/inp.txt 28260 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/log.txt 2741 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/out.total.txt 1730 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/par.txt 2068 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/qsub.sh 25 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/save.FF.dat 5684 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/save.L.dat 845403 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/save.M.dat 835164 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/save.M2.dat 868478 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/save.M_cnt.dat 8 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/save.Nf.dat 5766 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/save.b_forces.dat 5839 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/save.b_struct.dat 835164 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/save.d2M.dat 6168 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/save.d2b.dat 5733 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/save.g.dat 5642 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/save.g_cnt.dat 5642 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/save.rescale.dat 4984 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair/summarize_input.txt 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/ 1085 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/L.Angle.total.angles.dat 1116 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/L.BondStretch.total.bonds.dat 6200 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/L.Dihedral.total.dihedrals.dat 4681 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/L.IntraMolec_NB_Pair.total.intra_1-4.dat 9951 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/L.Pair_Interaction.total.pairs.dat 620 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/L_coeff.Dihedral.total.dihedrals.dat 496 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/L_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 1023 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/L_coeff.Pair_Interaction.total.pairs.dat 3777 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/Protein_A.itp 2940 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/S.dat 2941 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/S_CONST.dat 1085 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/b_forces.Angle.total.angles.dat 1116 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/b_forces.BondStretch.total.bonds.dat 6200 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/b_forces.Dihedral.total.dihedrals.dat 4681 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/b_forces.IntraMolec_NB_Pair.total.intra_1-4.dat 9951 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/b_forces.Pair_Interaction.total.pairs.dat 620 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/b_forces_coeff.Dihedral.total.dihedrals.dat 496 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/b_forces_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 1023 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/b_forces_coeff.Pair_Interaction.total.pairs.dat 1085 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/b_struct.Angle.total.angles.dat 1116 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/b_struct.BondStretch.total.bonds.dat 6200 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/b_struct.Dihedral.total.dihedrals.dat 4681 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/b_struct.IntraMolec_NB_Pair.total.intra_1-4.dat 9951 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/b_struct.Pair_Interaction.total.pairs.dat 620 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/b_struct_coeff.Dihedral.total.dihedrals.dat 496 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/b_struct_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 1023 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/b_struct_coeff.Pair_Interaction.total.pairs.dat 58316 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgff-polyALA-FM_noH2O.o3915071 651 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgpolyALA_opls.gro 2091 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgpolyALA_opls.mdp 445 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgpolyALA_opls.top 5128 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgpolyALA_opls.tpr 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/ 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Emin/ 338 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Emin/Emin_Commands.txt 4250 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Emin/Protein_A.itp 609 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Emin/cgpolyALA_opls.Emin.gro 585 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Emin/cgpolyALA_opls.gro 5200 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Emin/cgpolyALA_opls.tpr 105 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Emin/mart_polyALA_Equil_POSRES.o3107585 4667 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Emin/mart_trp_zip.Emin.mdp 995 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Emin/mart_trp_zip.top 10323 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Emin/mdout-cgpolyALA_opls.mdp 232 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Emin/qsub.sh 238 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Emin/qsub_xj.sh 2102 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Emin/run_gmx.sh 145680 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Emin/table.xvg 14980 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Emin/table_a0.xvg 66469 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Emin/table_b0.xvg 29789 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Emin/table_d0.xvg 149911 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Emin/tablep.xvg 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Equil/ 4250 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Equil/Protein_A.itp 5200 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Equil/cgpolyALA_opls.Equil.tpr 897 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Equil/cgpolyALA_opls.confout.gro 105 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Equil/mart_polyALA_Equil_POSRES.o3107586 4671 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Equil/mart_trp_zip.Equil.mdp 995 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Equil/mart_trp_zip.top 10325 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Equil/mdout-cgpolyALA_opls.mdp 232 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Equil/qsub.sh 238 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Equil/qsub_xj.sh 2131 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Equil/run_gmx.sh 5352 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Equil/state.cpt 145680 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Equil/table.xvg 14980 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Equil/table_a0.xvg 66469 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Equil/table_b0.xvg 29789 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Equil/table_d0.xvg 149911 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Equil/tablep.xvg 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Prod_run/ 4250 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Prod_run/Protein_A.itp 32450675 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Prod_run/Rg.xvg 1307 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Prod_run/Tick_Marks_Rg_Q_scatter.m 1337 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Prod_run/Tick_Marks_Rg_rmsd_scatter.m 1548 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Prod_run/angles.xvg 1799 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Prod_run/bonds.xvg 11307 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Prod_run/bonds_1-4.xvg 6936 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Prod_run/bonds_1-4_all.xvg 8256 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Prod_run/bonds_1-5_all.xvg 10419 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Prod_run/bonds_2-5.xvg 11459 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Prod_run/bonds_3-6.xvg 10454 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Prod_run/bonds_4-7.xvg 11136 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Prod_run/bonds_5-8.xvg 10540 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Prod_run/bonds_6-9.xvg 10575 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Prod_run/bonds_7-10.xvg 10188 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Prod_run/bonds_8-11.xvg 10352 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Prod_run/bonds_9-12.xvg 1639 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Prod_run/calc_dist.sh 2106 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Prod_run/calc_dist_all1-4bonds.sh 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Prod_run/cgff/ 3769 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Prod_run/cgff/Protein_A.itp 651 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Prod_run/cgff/cgpolyALA_opls.gro 2091 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Prod_run/cgff/cgpolyALA_opls.mdp 445 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Prod_run/cgff/cgpolyALA_opls.top 4164 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Prod_run/cgff/cgpolyALA_opls.tpr 82 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Prod_run/cgff/inp.txt 1626 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Prod_run/cgff/par.txt 1704 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Prod_run/cgff/qsub.sh 897 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Prod_run/cgpolyALA_opls.confout.gro 585 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Prod_run/cgpolyALA_opls.gro 5200 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Prod_run/cgpolyALA_opls.tpr 3956 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Prod_run/dihedrals.xvg 10890471 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Prod_run/distance.xvg 10890497 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Prod_run/distance_bonds_1-4.dat.xvg 10890491 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Prod_run/distance_bonds_2-5.dat.xvg 10890496 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Prod_run/distance_bonds_3-6.dat.xvg 10890472 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Prod_run/distance_bonds_4-7.dat.xvg 10890512 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Prod_run/distance_bonds_5-8.dat.xvg 10890491 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Prod_run/distance_bonds_6-9.dat.xvg 10890505 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Prod_run/distance_bonds_7-10.dat.xvg 10890500 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Prod_run/distance_bonds_8-11.dat.xvg 10890493 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Prod_run/distance_bonds_9-12.dat.xvg 2049 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Prod_run/helicity.py 1745 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Prod_run/index.ndx 558 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Prod_run/index_dist.ndx 524 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Prod_run/index_dist_all1-4bonds.ndx 105 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Prod_run/mart_polyALA_Equil_PRODRUN.o3107587 4660 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Prod_run/mart_trp_zip.mdp 995 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Prod_run/mart_trp_zip.top 10316 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Prod_run/mdout-cgpolyALA_opls.mdp 232 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Prod_run/qsub.sh 238 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Prod_run/qsub_xj.sh 26166 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Prod_run/rdf_CA-CA.xvg 14750458 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Prod_run/rmsd.xvg 581 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Prod_run/rmsf.xvg 2117 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Prod_run/run_gmx.sh 363 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Prod_run/scatter.py 5348 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Prod_run/state.cpt 5348 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Prod_run/state_prev.cpt 145680 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Prod_run/table.xvg 14980 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Prod_run/table_a0.xvg 66469 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Prod_run/table_b0.xvg 29789 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Prod_run/table_d0.xvg 149911 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/Prod_run/tablep.xvg 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/rerun_BIandCGdih/ 3920 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/rerun_BIandCGdih/Protein_A.itp 585 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/rerun_BIandCGdih/cgpolyALA_opls.gro 4666 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/rerun_BIandCGdih/cgpolyALA_opls.mdp 995 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/rerun_BIandCGdih/cgpolyALA_opls.top 4820 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/rerun_BIandCGdih/cgpolyALA_opls.tpr 10306 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/rerun_BIandCGdih/mdout.mdp 29961 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/rerun_BIandCGdih/table_d0.xvg 29789 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/rerun_BIandCGdih/table_d1.xvg 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/rerun_BIbond-angleref/ 3541 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/rerun_BIbond-angleref/Protein_A.itp 585 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/rerun_BIbond-angleref/cgpolyALA_opls.gro 4666 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/rerun_BIbond-angleref/cgpolyALA_opls.mdp 995 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/rerun_BIbond-angleref/cgpolyALA_opls.top 4584 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/rerun_BIbond-angleref/cgpolyALA_opls.tpr 10306 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/rerun_BIbond-angleref/mdout.mdp 7495 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/rerun_BIbond-angleref/table_a0.xvg 24856 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/rerun_BIbond-angleref/table_b0.xvg 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/rerun_BIbond-angleref_CGdihref/ 3531 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/rerun_BIbond-angleref_CGdihref/Protein_A.itp 585 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/rerun_BIbond-angleref_CGdihref/cgpolyALA_opls.gro 4666 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/rerun_BIbond-angleref_CGdihref/cgpolyALA_opls.mdp 995 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/rerun_BIbond-angleref_CGdihref/cgpolyALA_opls.top 4788 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/rerun_BIbond-angleref_CGdihref/cgpolyALA_opls.tpr 7495 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/rerun_BIbond-angleref_CGdihref/table_a0.xvg 24856 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/rerun_BIbond-angleref_CGdihref/table_b0.xvg 29822 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/rerun_BIbond-angleref_CGdihref/table_d0.xvg 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/rerun_CGdihref/ 3542 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/rerun_CGdihref/Protein_A.itp 585 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/rerun_CGdihref/cgpolyALA_opls.gro 4666 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/rerun_CGdihref/cgpolyALA_opls.mdp 995 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/rerun_CGdihref/cgpolyALA_opls.top 4616 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/rerun_CGdihref/cgpolyALA_opls.tpr 10306 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/rerun_CGdihref/mdout.mdp 29822 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/cgsim/rerun_CGdihref/table_d0.xvg 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/edit/ 4681 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/edit/f_1-4.dat 1085 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/edit/f_angle.dat 1116 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/edit/f_bond.dat 9729 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/edit/f_dih.dat 1085 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/edit/f_forces.Angle.total.angles.dat 1116 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/edit/f_forces.BondStretch.total.bonds.dat 4681 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/edit/f_forces.IntraMolec_NB_Pair.total.intra_1-4.dat 5921 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/edit/f_forces.Pair_Interaction.total.pairs.dat 5921 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/edit/f_pairs.dat 801 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/edit/run.make_gmx4_table.sh 1085 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/f_forces.Angle.total.angles.dat 1116 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/f_forces.BondStretch.total.bonds.dat 6200 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/f_forces.Dihedral.total.dihedrals.dat 4681 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/f_forces.IntraMolec_NB_Pair.total.intra_1-4.dat 9951 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/f_forces.Pair_Interaction.total.pairs.dat 620 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/f_forces_coeff.Dihedral.total.dihedrals.dat 496 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/f_forces_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 1023 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/f_forces_coeff.Pair_Interaction.total.pairs.dat 1085 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/f_struct.Angle.total.angles.dat 1116 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/f_struct.BondStretch.total.bonds.dat 6200 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/f_struct.Dihedral.total.dihedrals.dat 4681 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/f_struct.IntraMolec_NB_Pair.total.intra_1-4.dat 9951 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/f_struct.Pair_Interaction.total.pairs.dat 620 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/f_struct_coeff.Dihedral.total.dihedrals.dat 496 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/f_struct_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 1023 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/f_struct_coeff.Pair_Interaction.total.pairs.dat 1085 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/g.Angle.total.angles.dat 1116 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/g.BondStretch.total.bonds.dat 6200 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/g.Dihedral.total.dihedrals.dat 4681 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/g.IntraMolec_NB_Pair.total.intra_1-4.dat 9951 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/g.Pair_Interaction.total.pairs.dat 1085 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/g_cnt.Angle.total.angles.dat 1116 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/g_cnt.BondStretch.total.bonds.dat 6200 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/g_cnt.Dihedral.total.dihedrals.dat 4681 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/g_cnt.IntraMolec_NB_Pair.total.intra_1-4.dat 9951 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/g_cnt.Pair_Interaction.total.pairs.dat 620 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/g_cnt_coeff.Dihedral.total.dihedrals.dat 496 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/g_cnt_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 1023 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/g_cnt_coeff.Pair_Interaction.total.pairs.dat 620 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/g_coeff.Dihedral.total.dihedrals.dat 496 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/g_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 1023 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/g_coeff.Pair_Interaction.total.pairs.dat 102 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/inp.txt 32713 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/log.txt 3434 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/out.total.txt 1726 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/par.txt 2068 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/qsub.sh 25 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/save.FF.dat 6653 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/save.L.dat 1159545 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/save.M.dat 1147182 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/save.M2.dat 1186745 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/save.M_cnt.dat 8 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/save.Nf.dat 6754 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/save.b_forces.dat 6848 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/save.b_struct.dat 1147182 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/save.d2M.dat 7170 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/save.d2b.dat 6713 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/save.g.dat 6610 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/save.g_cnt.dat 6610 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/save.rescale.dat 5484 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4/summarize_input.txt 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/ 1085 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/L.Angle.total.angles.dat 1116 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/L.BondStretch.total.bonds.dat 6200 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/L.Dihedral.total.dihedrals.dat 4991 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/L.Pair_Interaction.total.intra_1-4.dat 3751 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/L.Pair_Interaction.total.intra_1-4mid.dat 4371 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/L.Pair_Interaction.total.intra_2-5.dat 4681 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/L.Pair_Interaction.total.intra_8-11.dat 5301 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/L.Pair_Interaction.total.intra_9-12.dat 9951 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/L.Pair_Interaction.total.pairs.dat 620 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/L_coeff.Dihedral.total.dihedrals.dat 527 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/L_coeff.Pair_Interaction.total.intra_1-4.dat 403 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/L_coeff.Pair_Interaction.total.intra_1-4mid.dat 465 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/L_coeff.Pair_Interaction.total.intra_2-5.dat 496 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/L_coeff.Pair_Interaction.total.intra_8-11.dat 558 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/L_coeff.Pair_Interaction.total.intra_9-12.dat 1023 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/L_coeff.Pair_Interaction.total.pairs.dat 3787 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/Protein_A.itp 4263 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/S.dat 4264 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/S_CONST.dat 1085 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/b_forces.Angle.total.angles.dat 1116 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/b_forces.BondStretch.total.bonds.dat 6200 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/b_forces.Dihedral.total.dihedrals.dat 4991 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/b_forces.Pair_Interaction.total.intra_1-4.dat 3751 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/b_forces.Pair_Interaction.total.intra_1-4mid.dat 4371 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/b_forces.Pair_Interaction.total.intra_2-5.dat 4681 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/b_forces.Pair_Interaction.total.intra_8-11.dat 5301 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/b_forces.Pair_Interaction.total.intra_9-12.dat 9951 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/b_forces.Pair_Interaction.total.pairs.dat 620 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/b_forces_coeff.Dihedral.total.dihedrals.dat 527 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/b_forces_coeff.Pair_Interaction.total.intra_1-4.dat 403 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/b_forces_coeff.Pair_Interaction.total.intra_1-4mid.dat 465 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/b_forces_coeff.Pair_Interaction.total.intra_2-5.dat 496 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/b_forces_coeff.Pair_Interaction.total.intra_8-11.dat 558 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/b_forces_coeff.Pair_Interaction.total.intra_9-12.dat 1023 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/b_forces_coeff.Pair_Interaction.total.pairs.dat 1085 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/b_struct.Angle.total.angles.dat 1116 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/b_struct.BondStretch.total.bonds.dat 6200 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/b_struct.Dihedral.total.dihedrals.dat 4991 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/b_struct.Pair_Interaction.total.intra_1-4.dat 3751 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/b_struct.Pair_Interaction.total.intra_1-4mid.dat 4371 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/b_struct.Pair_Interaction.total.intra_2-5.dat 4681 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/b_struct.Pair_Interaction.total.intra_8-11.dat 5301 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/b_struct.Pair_Interaction.total.intra_9-12.dat 9951 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/b_struct.Pair_Interaction.total.pairs.dat 620 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/b_struct_coeff.Dihedral.total.dihedrals.dat 527 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/b_struct_coeff.Pair_Interaction.total.intra_1-4.dat 403 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/b_struct_coeff.Pair_Interaction.total.intra_1-4mid.dat 465 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/b_struct_coeff.Pair_Interaction.total.intra_2-5.dat 496 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/b_struct_coeff.Pair_Interaction.total.intra_8-11.dat 558 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/b_struct_coeff.Pair_Interaction.total.intra_9-12.dat 1023 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/b_struct_coeff.Pair_Interaction.total.pairs.dat 58316 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgff-polyALA-FM_noH2O.o3931422 651 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgpolyALA_opls.gro 2091 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgpolyALA_opls.mdp 995 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgpolyALA_opls.top 5032 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgpolyALA_opls.tpr 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/ 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Emin/ 338 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Emin/Emin_Commands.txt 4268 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Emin/Protein_A.itp 609 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Emin/cgpolyALA_opls.Emin.gro 585 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Emin/cgpolyALA_opls.gro 5296 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Emin/cgpolyALA_opls.tpr 186 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Emin/index.ndx 104 11-09-2014 16:50 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ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Equil/state.cpt 146051 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Equil/table.xvg 146238 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Equil/table_A1_A4.xvg 146219 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Equil/table_A2_A5.xvg 146181 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Equil/table_A3_A6.xvg 146181 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Equil/table_A4_A7.xvg 146181 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Equil/table_A5_A8.xvg 146181 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Equil/table_A6_A9.xvg 146181 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Equil/table_A7_A10.xvg 146175 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Equil/table_A8_A11.xvg 146244 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Equil/table_A9_A12.xvg 14912 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Equil/table_a0.xvg 66470 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Equil/table_b0.xvg 29830 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Equil/table_d0.xvg 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/ 3947694 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/FESs_Rg_Q.eps 27038 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/FESs_Rg_Q.png 4268 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/Protein_A.itp 8266985 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/Q.dat 32450663 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/Rg.xvg 13152932 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/Rg_Q_scatter.xvg 1307 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/Tick_Marks_Rg_Q_scatter.m 1855 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/Tick_Marks_Rg_Q_scatter_SJdivAA.m 1337 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/Tick_Marks_Rg_rmsd_scatter.m 4209 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/angles.xvg 11894 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/bonds.xvg 11096 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/bonds_1-4.xvg 11305 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/bonds_1-4_all.xvg 11305 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/bonds_1-4mid.xvg 17214 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/bonds_1-5_all.xvg 11077 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/bonds_2-5.xvg 11058 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/bonds_3-6.xvg 11267 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/bonds_4-7.xvg 11153 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/bonds_5-8.xvg 11229 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/bonds_6-9.xvg 11286 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/bonds_7-10.xvg 10963 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/bonds_8-11.xvg 11020 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/bonds_9-12.xvg 1881 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/calc_dist.sh 2141 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/calc_dist_all1-4bonds.sh 1976 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/calc_dist_all1-5bonds.sh 2093 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/calc_dist_endtypes.sh 1020 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/calc_dist_rdf.sh 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/ 2542 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/L.Angle.total.angles.dat 1240 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/L.BondStretch.total.bonds.dat 22320 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/L.Dihedral.total.dihedrals.dat 11191 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/L.Pair_Interaction.total.intra_1-4.dat 11191 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/L.Pair_Interaction.total.intra_1-4mid.dat 11191 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/L.Pair_Interaction.total.intra_2-5.dat 11191 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/L.Pair_Interaction.total.intra_8-11.dat 11191 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/L.Pair_Interaction.total.intra_9-12.dat 13051 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/L.Pair_Interaction.total.pairs.dat 2232 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/L_coeff.Dihedral.total.dihedrals.dat 1147 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/L_coeff.Pair_Interaction.total.intra_1-4.dat 1147 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/L_coeff.Pair_Interaction.total.intra_1-4mid.dat 1147 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/L_coeff.Pair_Interaction.total.intra_2-5.dat 1147 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/L_coeff.Pair_Interaction.total.intra_8-11.dat 1147 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/L_coeff.Pair_Interaction.total.intra_9-12.dat 1333 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/L_coeff.Pair_Interaction.total.pairs.dat 3787 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/Protein_A.itp 8862 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/S.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/S_CONST.dat 2542 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/b_forces.Angle.total.angles.dat 1240 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/b_forces.BondStretch.total.bonds.dat 22320 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/b_forces.Dihedral.total.dihedrals.dat 11191 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/b_forces.Pair_Interaction.total.intra_1-4.dat 11191 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/b_forces.Pair_Interaction.total.intra_1-4mid.dat 11191 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/b_forces.Pair_Interaction.total.intra_2-5.dat 11191 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/b_forces.Pair_Interaction.total.intra_8-11.dat 11191 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/b_forces.Pair_Interaction.total.intra_9-12.dat 13051 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/b_forces.Pair_Interaction.total.pairs.dat 2232 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/b_forces_coeff.Dihedral.total.dihedrals.dat 1147 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/b_forces_coeff.Pair_Interaction.total.intra_1-4.dat 1147 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/b_forces_coeff.Pair_Interaction.total.intra_1-4mid.dat 1147 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/b_forces_coeff.Pair_Interaction.total.intra_2-5.dat 1147 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/b_forces_coeff.Pair_Interaction.total.intra_8-11.dat 1147 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/b_forces_coeff.Pair_Interaction.total.intra_9-12.dat 1333 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/b_forces_coeff.Pair_Interaction.total.pairs.dat 2542 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/b_struct.Angle.total.angles.dat 1240 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/b_struct.BondStretch.total.bonds.dat 22320 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/b_struct.Dihedral.total.dihedrals.dat 11191 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/b_struct.Pair_Interaction.total.intra_1-4.dat 11191 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/b_struct.Pair_Interaction.total.intra_1-4mid.dat 11191 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/b_struct.Pair_Interaction.total.intra_2-5.dat 11191 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/b_struct.Pair_Interaction.total.intra_8-11.dat 11191 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/b_struct.Pair_Interaction.total.intra_9-12.dat 13051 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/b_struct.Pair_Interaction.total.pairs.dat 2232 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/b_struct_coeff.Dihedral.total.dihedrals.dat 1147 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/b_struct_coeff.Pair_Interaction.total.intra_1-4.dat 1147 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/b_struct_coeff.Pair_Interaction.total.intra_1-4mid.dat 1147 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/b_struct_coeff.Pair_Interaction.total.intra_2-5.dat 1147 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/b_struct_coeff.Pair_Interaction.total.intra_8-11.dat 1147 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/b_struct_coeff.Pair_Interaction.total.intra_9-12.dat 1333 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/b_struct_coeff.Pair_Interaction.total.pairs.dat 105993 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/cgff-polyALA-FM_noH2O.o3563789 651 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/cgpolyALA_opls.gro 2091 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/cgpolyALA_opls.mdp 995 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/cgpolyALA_opls.top 5032 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/cgpolyALA_opls.tpr 2542 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/f_forces.Angle.total.angles.dat 1240 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/f_forces.BondStretch.total.bonds.dat 22351 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/f_forces.Dihedral.total.dihedrals.dat 11191 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/f_forces.Pair_Interaction.total.intra_1-4.dat 11191 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/f_forces.Pair_Interaction.total.intra_1-4mid.dat 11191 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/f_forces.Pair_Interaction.total.intra_2-5.dat 11191 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/f_forces.Pair_Interaction.total.intra_8-11.dat 11191 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/f_forces.Pair_Interaction.total.intra_9-12.dat 13051 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/f_forces.Pair_Interaction.total.pairs.dat 2263 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/f_forces_coeff.Dihedral.total.dihedrals.dat 1147 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/f_forces_coeff.Pair_Interaction.total.intra_1-4.dat 1147 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/f_forces_coeff.Pair_Interaction.total.intra_1-4mid.dat 1147 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/f_forces_coeff.Pair_Interaction.total.intra_2-5.dat 1147 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/f_forces_coeff.Pair_Interaction.total.intra_8-11.dat 1147 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/f_forces_coeff.Pair_Interaction.total.intra_9-12.dat 1333 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/f_forces_coeff.Pair_Interaction.total.pairs.dat 2542 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/f_struct.Angle.total.angles.dat 1240 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/f_struct.BondStretch.total.bonds.dat 22351 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/f_struct.Dihedral.total.dihedrals.dat 11191 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/f_struct.Pair_Interaction.total.intra_1-4.dat 11191 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/f_struct.Pair_Interaction.total.intra_1-4mid.dat 11191 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/f_struct.Pair_Interaction.total.intra_2-5.dat 11191 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/f_struct.Pair_Interaction.total.intra_8-11.dat 11191 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/f_struct.Pair_Interaction.total.intra_9-12.dat 13051 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/f_struct.Pair_Interaction.total.pairs.dat 2263 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/f_struct_coeff.Dihedral.total.dihedrals.dat 1147 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/f_struct_coeff.Pair_Interaction.total.intra_1-4.dat 1147 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/f_struct_coeff.Pair_Interaction.total.intra_1-4mid.dat 1147 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/f_struct_coeff.Pair_Interaction.total.intra_2-5.dat 1147 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/f_struct_coeff.Pair_Interaction.total.intra_8-11.dat 1147 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/f_struct_coeff.Pair_Interaction.total.intra_9-12.dat 1333 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/f_struct_coeff.Pair_Interaction.total.pairs.dat 2542 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/g.Angle.total.angles.dat 1240 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/g.BondStretch.total.bonds.dat 22320 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/g.Dihedral.total.dihedrals.dat 11191 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/g.Pair_Interaction.total.intra_1-4.dat 11191 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/g.Pair_Interaction.total.intra_1-4mid.dat 11191 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/g.Pair_Interaction.total.intra_2-5.dat 11191 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/g.Pair_Interaction.total.intra_8-11.dat 11191 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/g.Pair_Interaction.total.intra_9-12.dat 13051 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/g.Pair_Interaction.total.pairs.dat 2542 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/g_cnt.Angle.total.angles.dat 1240 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/g_cnt.BondStretch.total.bonds.dat 22320 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/g_cnt.Dihedral.total.dihedrals.dat 11191 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/g_cnt.Pair_Interaction.total.intra_1-4.dat 11191 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/g_cnt.Pair_Interaction.total.intra_1-4mid.dat 11191 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/g_cnt.Pair_Interaction.total.intra_2-5.dat 11191 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/g_cnt.Pair_Interaction.total.intra_8-11.dat 11191 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/g_cnt.Pair_Interaction.total.intra_9-12.dat 13051 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/g_cnt.Pair_Interaction.total.pairs.dat 2232 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/g_cnt_coeff.Dihedral.total.dihedrals.dat 1147 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/g_cnt_coeff.Pair_Interaction.total.intra_1-4.dat 1147 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/g_cnt_coeff.Pair_Interaction.total.intra_1-4mid.dat 1147 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/g_cnt_coeff.Pair_Interaction.total.intra_2-5.dat 1147 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/g_cnt_coeff.Pair_Interaction.total.intra_8-11.dat 1147 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/g_cnt_coeff.Pair_Interaction.total.intra_9-12.dat 1333 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/g_cnt_coeff.Pair_Interaction.total.pairs.dat 2232 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/g_coeff.Dihedral.total.dihedrals.dat 1147 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/g_coeff.Pair_Interaction.total.intra_1-4.dat 1147 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/g_coeff.Pair_Interaction.total.intra_1-4mid.dat 1147 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/g_coeff.Pair_Interaction.total.intra_2-5.dat 1147 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/g_coeff.Pair_Interaction.total.intra_8-11.dat 1147 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/g_coeff.Pair_Interaction.total.intra_9-12.dat 1333 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/g_coeff.Pair_Interaction.total.pairs.dat 82 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/inp.txt 55568 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/log.txt 6633 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/out.total.txt 3829 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/par.txt 1704 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/qsub.sh 24 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/save.FF.dat 10559 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/save.L.dat 2923167 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/save.M.dat 2889444 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/save.M2.dat 3120952 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/save.M_cnt.dat 8 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/save.Nf.dat 10695 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/save.b_forces.dat 10727 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/save.b_struct.dat 2889444 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/save.d2M.dat 11408 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/save.d2b.dat 10775 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/save.g.dat 10469 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/save.g_cnt.dat 10469 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/save.rescale.dat 21823 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff/summarize_input.txt 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/ 2542 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/L.Angle.total.angles.dat 1240 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/L.BondStretch.total.bonds.dat 11191 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/L.Pair_Interaction.total.intra_1-4.dat 11191 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/L.Pair_Interaction.total.intra_1-4mid.dat 11191 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/L.Pair_Interaction.total.intra_2-5.dat 11191 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/L.Pair_Interaction.total.intra_8-11.dat 11191 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/L.Pair_Interaction.total.intra_9-12.dat 13051 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/L.Pair_Interaction.total.pairs.dat 1147 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/L_coeff.Pair_Interaction.total.intra_1-4.dat 1147 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/L_coeff.Pair_Interaction.total.intra_1-4mid.dat 1147 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/L_coeff.Pair_Interaction.total.intra_2-5.dat 1147 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/L_coeff.Pair_Interaction.total.intra_8-11.dat 1147 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/L_coeff.Pair_Interaction.total.intra_9-12.dat 1333 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/L_coeff.Pair_Interaction.total.pairs.dat 3787 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/Protein_A.itp 7413 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/S.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/S_CONST.dat 2542 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/b_forces.Angle.total.angles.dat 1240 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/b_forces.BondStretch.total.bonds.dat 11191 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/b_forces.Pair_Interaction.total.intra_1-4.dat 11191 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/b_forces.Pair_Interaction.total.intra_1-4mid.dat 11191 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/b_forces.Pair_Interaction.total.intra_2-5.dat 11191 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/b_forces.Pair_Interaction.total.intra_8-11.dat 11191 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/b_forces.Pair_Interaction.total.intra_9-12.dat 13051 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/b_forces.Pair_Interaction.total.pairs.dat 36 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/b_forces_coeff.Dihedral.total.dihedrals.dat 1147 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/b_forces_coeff.Pair_Interaction.total.intra_1-4.dat 1147 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/b_forces_coeff.Pair_Interaction.total.intra_1-4mid.dat 1147 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/b_forces_coeff.Pair_Interaction.total.intra_2-5.dat 1147 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/b_forces_coeff.Pair_Interaction.total.intra_8-11.dat 1147 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/b_forces_coeff.Pair_Interaction.total.intra_9-12.dat 1333 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/b_forces_coeff.Pair_Interaction.total.pairs.dat 2542 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/b_struct.Angle.total.angles.dat 1240 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/b_struct.BondStretch.total.bonds.dat 11191 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/b_struct.Pair_Interaction.total.intra_1-4.dat 11191 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/b_struct.Pair_Interaction.total.intra_1-4mid.dat 11191 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/b_struct.Pair_Interaction.total.intra_2-5.dat 11191 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/b_struct.Pair_Interaction.total.intra_8-11.dat 11191 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/b_struct.Pair_Interaction.total.intra_9-12.dat 13051 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/b_struct.Pair_Interaction.total.pairs.dat 1147 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/b_struct_coeff.Pair_Interaction.total.intra_1-4.dat 1147 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/b_struct_coeff.Pair_Interaction.total.intra_1-4mid.dat 1147 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/b_struct_coeff.Pair_Interaction.total.intra_2-5.dat 1147 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/b_struct_coeff.Pair_Interaction.total.intra_8-11.dat 1147 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/b_struct_coeff.Pair_Interaction.total.intra_9-12.dat 1333 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/b_struct_coeff.Pair_Interaction.total.pairs.dat 104682 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/cgff-polyALA-FM_noH2O.o3587879 651 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/cgpolyALA_opls.gro 2091 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/cgpolyALA_opls.mdp 995 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/cgpolyALA_opls.top 5032 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/cgpolyALA_opls.tpr 2542 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/f_forces.Angle.total.angles.dat 1240 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/f_forces.BondStretch.total.bonds.dat 22351 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/f_forces.Dihedral.total.dihedrals.dat 11191 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/f_forces.Pair_Interaction.total.intra_1-4.dat 11191 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/f_forces.Pair_Interaction.total.intra_1-4mid.dat 11191 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/f_forces.Pair_Interaction.total.intra_2-5.dat 11191 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/f_forces.Pair_Interaction.total.intra_8-11.dat 11191 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/f_forces.Pair_Interaction.total.intra_9-12.dat 13051 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/f_forces.Pair_Interaction.total.pairs.dat 1147 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/f_forces_coeff.Pair_Interaction.total.intra_1-4.dat 1147 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/f_forces_coeff.Pair_Interaction.total.intra_1-4mid.dat 1147 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/f_forces_coeff.Pair_Interaction.total.intra_2-5.dat 1147 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/f_forces_coeff.Pair_Interaction.total.intra_8-11.dat 1147 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/f_forces_coeff.Pair_Interaction.total.intra_9-12.dat 1333 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/f_forces_coeff.Pair_Interaction.total.pairs.dat 2542 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/f_struct.Angle.total.angles.dat 1240 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/f_struct.BondStretch.total.bonds.dat 22351 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/f_struct.Dihedral.total.dihedrals.dat 11191 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/f_struct.Pair_Interaction.total.intra_1-4.dat 11191 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/f_struct.Pair_Interaction.total.intra_1-4mid.dat 11191 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/f_struct.Pair_Interaction.total.intra_2-5.dat 11191 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/f_struct.Pair_Interaction.total.intra_8-11.dat 11191 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/f_struct.Pair_Interaction.total.intra_9-12.dat 13051 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/f_struct.Pair_Interaction.total.pairs.dat 1147 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/f_struct_coeff.Pair_Interaction.total.intra_1-4.dat 1147 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/f_struct_coeff.Pair_Interaction.total.intra_1-4mid.dat 1147 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/f_struct_coeff.Pair_Interaction.total.intra_2-5.dat 1147 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/f_struct_coeff.Pair_Interaction.total.intra_8-11.dat 1147 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/f_struct_coeff.Pair_Interaction.total.intra_9-12.dat 1333 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/f_struct_coeff.Pair_Interaction.total.pairs.dat 2542 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/g.Angle.total.angles.dat 1240 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/g.BondStretch.total.bonds.dat 11191 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/g.Pair_Interaction.total.intra_1-4.dat 11191 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/g.Pair_Interaction.total.intra_1-4mid.dat 11191 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/g.Pair_Interaction.total.intra_2-5.dat 11191 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/g.Pair_Interaction.total.intra_8-11.dat 11191 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/g.Pair_Interaction.total.intra_9-12.dat 13051 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/g.Pair_Interaction.total.pairs.dat 2542 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/g_cnt.Angle.total.angles.dat 1240 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/g_cnt.BondStretch.total.bonds.dat 11191 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/g_cnt.Pair_Interaction.total.intra_1-4.dat 11191 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/g_cnt.Pair_Interaction.total.intra_1-4mid.dat 11191 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/g_cnt.Pair_Interaction.total.intra_2-5.dat 11191 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/g_cnt.Pair_Interaction.total.intra_8-11.dat 11191 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/g_cnt.Pair_Interaction.total.intra_9-12.dat 13051 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/g_cnt.Pair_Interaction.total.pairs.dat 1147 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/g_cnt_coeff.Pair_Interaction.total.intra_1-4.dat 1147 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/g_cnt_coeff.Pair_Interaction.total.intra_1-4mid.dat 1147 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/g_cnt_coeff.Pair_Interaction.total.intra_2-5.dat 1147 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/g_cnt_coeff.Pair_Interaction.total.intra_8-11.dat 1147 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/g_cnt_coeff.Pair_Interaction.total.intra_9-12.dat 1333 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/g_cnt_coeff.Pair_Interaction.total.pairs.dat 1147 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/g_coeff.Pair_Interaction.total.intra_1-4.dat 1147 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/g_coeff.Pair_Interaction.total.intra_1-4mid.dat 1147 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/g_coeff.Pair_Interaction.total.intra_2-5.dat 1147 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/g_coeff.Pair_Interaction.total.intra_8-11.dat 1147 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/g_coeff.Pair_Interaction.total.intra_9-12.dat 1333 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/g_coeff.Pair_Interaction.total.pairs.dat 82 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/inp.txt 48240 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/log.txt 7285 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/out.total.txt 3804 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/par.txt 1704 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/qsub.sh 24 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/save.FF.dat 9229 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/save.L.dat 2219870 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/save.M.dat 2202501 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/save.M2.dat 2346835 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/save.M_cnt.dat 8 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/save.Nf.dat 9330 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/save.b_forces.dat 9385 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/save.b_struct.dat 2202522 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/save.d2M.dat 9889 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/save.d2b.dat 9387 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/save.g.dat 9142 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/save.g_cnt.dat 9142 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/save.rescale.dat 21612 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgff_analdih/summarize_input.txt 897 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgpolyALA_opls.confout.gro 585 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgpolyALA_opls.gro 5296 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/cgpolyALA_opls.tpr 8303 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/dihedrals.xvg 10890020 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/distance.xvg 10890020 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/distance_bonds_1-4.dat.xvg 10890020 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/distance_bonds_1-4mid.dat.xvg 10890020 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/distance_bonds_2-5.dat.xvg 10890020 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/distance_bonds_3-6.dat.xvg 10890020 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/distance_bonds_4-7.dat.xvg 10890020 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/distance_bonds_5-8.dat.xvg 10890020 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/distance_bonds_6-9.dat.xvg 10890020 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/distance_bonds_7-10.dat.xvg 10890020 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/distance_bonds_8-11.dat.xvg 10890020 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/distance_bonds_9-12.dat.xvg 2049 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/helicity.py 186 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/index.ndx 558 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/index_dist.ndx 524 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/index_dist_all1-4bonds.ndx 505 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/index_dist_all1-5bonds.ndx 525 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/index_dist_endtypes.ndx 108 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/mart_polyALA_Equil_PRODRUN.o3563531 4819 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/mart_trp_zip.mdp 995 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/mart_trp_zip.top 10403 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/cgsim/Prod_run/mdout-cgpolyALA_opls.mdp 232 11-09-2014 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ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/f_forces_coeff.Pair_Interaction.total.intra_9-12.dat 1023 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/f_forces_coeff.Pair_Interaction.total.pairs.dat 1085 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/f_struct.Angle.total.angles.dat 1116 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/f_struct.BondStretch.total.bonds.dat 6200 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/f_struct.Dihedral.total.dihedrals.dat 4991 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/f_struct.Pair_Interaction.total.intra_1-4.dat 3751 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/f_struct.Pair_Interaction.total.intra_1-4mid.dat 4371 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/f_struct.Pair_Interaction.total.intra_2-5.dat 4681 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/f_struct.Pair_Interaction.total.intra_8-11.dat 5301 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/f_struct.Pair_Interaction.total.intra_9-12.dat 9951 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/f_struct.Pair_Interaction.total.pairs.dat 620 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/f_struct_coeff.Dihedral.total.dihedrals.dat 527 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/f_struct_coeff.Pair_Interaction.total.intra_1-4.dat 403 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/f_struct_coeff.Pair_Interaction.total.intra_1-4mid.dat 465 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/f_struct_coeff.Pair_Interaction.total.intra_2-5.dat 496 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/f_struct_coeff.Pair_Interaction.total.intra_8-11.dat 558 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/f_struct_coeff.Pair_Interaction.total.intra_9-12.dat 1023 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/f_struct_coeff.Pair_Interaction.total.pairs.dat 1085 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/g.Angle.total.angles.dat 1116 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/g.BondStretch.total.bonds.dat 6200 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/g.Dihedral.total.dihedrals.dat 4991 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/g.Pair_Interaction.total.intra_1-4.dat 3751 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/g.Pair_Interaction.total.intra_1-4mid.dat 4371 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/g.Pair_Interaction.total.intra_2-5.dat 4681 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/g.Pair_Interaction.total.intra_8-11.dat 5301 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/g.Pair_Interaction.total.intra_9-12.dat 9951 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/g.Pair_Interaction.total.pairs.dat 1085 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/g_cnt.Angle.total.angles.dat 1116 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/g_cnt.BondStretch.total.bonds.dat 6200 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/g_cnt.Dihedral.total.dihedrals.dat 4991 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/g_cnt.Pair_Interaction.total.intra_1-4.dat 3751 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/g_cnt.Pair_Interaction.total.intra_1-4mid.dat 4371 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/g_cnt.Pair_Interaction.total.intra_2-5.dat 4681 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/g_cnt.Pair_Interaction.total.intra_8-11.dat 5301 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/g_cnt.Pair_Interaction.total.intra_9-12.dat 9951 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/g_cnt.Pair_Interaction.total.pairs.dat 620 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/g_cnt_coeff.Dihedral.total.dihedrals.dat 527 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/g_cnt_coeff.Pair_Interaction.total.intra_1-4.dat 403 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/g_cnt_coeff.Pair_Interaction.total.intra_1-4mid.dat 465 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/g_cnt_coeff.Pair_Interaction.total.intra_2-5.dat 496 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/g_cnt_coeff.Pair_Interaction.total.intra_8-11.dat 558 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/g_cnt_coeff.Pair_Interaction.total.intra_9-12.dat 1023 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/g_cnt_coeff.Pair_Interaction.total.pairs.dat 620 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/g_coeff.Dihedral.total.dihedrals.dat 527 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/g_coeff.Pair_Interaction.total.intra_1-4.dat 403 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/g_coeff.Pair_Interaction.total.intra_1-4mid.dat 465 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/g_coeff.Pair_Interaction.total.intra_2-5.dat 496 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/g_coeff.Pair_Interaction.total.intra_8-11.dat 558 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/g_coeff.Pair_Interaction.total.intra_9-12.dat 1023 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/g_coeff.Pair_Interaction.total.pairs.dat 106 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/inp.txt 51031 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/log.txt 6666 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/out.total.txt 3829 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/par.txt 2068 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/qsub.sh 25 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/save.FF.dat 10529 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/save.L.dat 2908610 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/save.M.dat 2889444 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/save.M2.dat 2952140 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/save.M_cnt.dat 8 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/save.Nf.dat 10702 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/save.b_forces.dat 10892 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/save.b_struct.dat 2889444 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/save.d2M.dat 11173 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/save.d2b.dat 10626 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/save.g.dat 10482 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/save.g_cnt.dat 10482 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/save.rescale.dat 21848 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-4endtypes/summarize_input.txt 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/ 1085 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/L.Angle.total.angles.dat 1116 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/L.BondStretch.total.bonds.dat 6200 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/L.Dihedral.total.dihedrals.dat 4681 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/L.IntraMolec_NB_Pair.total.intra_1-4.dat 6851 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/L.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/L.Pair_Interaction.total.pairs.dat 620 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/L_coeff.Dihedral.total.dihedrals.dat 496 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/L_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 713 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/L_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/L_coeff.Pair_Interaction.total.pairs.dat 3769 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/Protein_A.itp 3150 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/S.dat 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/S_CONST.dat 1085 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/b_forces.Angle.total.angles.dat 1116 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/b_forces.BondStretch.total.bonds.dat 6200 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/b_forces.Dihedral.total.dihedrals.dat 4681 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/b_forces.IntraMolec_NB_Pair.total.intra_1-4.dat 6851 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/b_forces.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/b_forces.Pair_Interaction.total.pairs.dat 620 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/b_forces_coeff.Dihedral.total.dihedrals.dat 496 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/b_forces_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 713 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/b_forces_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/b_forces_coeff.Pair_Interaction.total.pairs.dat 1085 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/b_struct.Angle.total.angles.dat 1116 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/b_struct.BondStretch.total.bonds.dat 6200 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/b_struct.Dihedral.total.dihedrals.dat 4681 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/b_struct.IntraMolec_NB_Pair.total.intra_1-4.dat 6851 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/b_struct.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/b_struct.Pair_Interaction.total.pairs.dat 620 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/b_struct_coeff.Dihedral.total.dihedrals.dat 496 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/b_struct_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 713 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/b_struct_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/b_struct_coeff.Pair_Interaction.total.pairs.dat 61056 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/cgff-polyALA-FM_noH2O.o3107582 651 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/cgpolyALA_opls.gro 2091 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/cgpolyALA_opls.mdp 445 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/cgpolyALA_opls.top 4164 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/cgpolyALA_opls.tpr 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/cgsim/ 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/cgsim/Emin/ 338 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/cgsim/Emin/Emin_Commands.txt 4250 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/cgsim/Emin/Protein_A.itp 609 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/cgsim/Emin/cgpolyALA_opls.Emin.gro 585 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/cgsim/Emin/cgpolyALA_opls.gro 5200 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/cgsim/Emin/cgpolyALA_opls.tpr 105 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/cgsim/Emin/mart_polyALA_Equil_POSRES.o3107585 4667 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/cgsim/Emin/mart_trp_zip.Emin.mdp 995 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/cgsim/Emin/mart_trp_zip.top 10323 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/cgsim/Emin/mdout-cgpolyALA_opls.mdp 232 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/cgsim/Emin/qsub.sh 238 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/cgsim/Emin/qsub_xj.sh 2102 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/cgsim/Emin/run_gmx.sh 145680 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/cgsim/Emin/table.xvg 14980 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/cgsim/Emin/table_a0.xvg 66469 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/cgsim/Emin/table_b0.xvg 29789 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/cgsim/Emin/table_d0.xvg 149911 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/cgsim/Emin/tablep.xvg 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/cgsim/Equil/ 4250 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/cgsim/Equil/Protein_A.itp 5200 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/cgsim/Equil/cgpolyALA_opls.Equil.tpr 897 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/cgsim/Equil/cgpolyALA_opls.confout.gro 105 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/cgsim/Equil/mart_polyALA_Equil_POSRES.o3107586 4671 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/cgsim/Equil/mart_trp_zip.Equil.mdp 995 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/cgsim/Equil/mart_trp_zip.top 10325 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/cgsim/Equil/mdout-cgpolyALA_opls.mdp 232 11-09-2014 16:50 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ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/cgsim/Prod_run/index_dist_all1-4bonds.ndx 105 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/cgsim/Prod_run/mart_polyALA_Equil_PRODRUN.o3107587 4660 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/cgsim/Prod_run/mart_trp_zip.mdp 995 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/cgsim/Prod_run/mart_trp_zip.top 10316 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/cgsim/Prod_run/mdout-cgpolyALA_opls.mdp 232 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/cgsim/Prod_run/qsub.sh 238 11-09-2014 16:50 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ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/cgsim/Prod_run/state.cpt 5348 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/cgsim/Prod_run/state_prev.cpt 145680 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/cgsim/Prod_run/table.xvg 14980 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/cgsim/Prod_run/table_a0.xvg 66469 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/cgsim/Prod_run/table_b0.xvg 29789 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/cgsim/Prod_run/table_d0.xvg 149911 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/cgsim/Prod_run/tablep.xvg 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/cgsim/rerun_BIandCGdih/ 3920 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/cgsim/rerun_BIandCGdih/Protein_A.itp 585 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/cgsim/rerun_BIandCGdih/cgpolyALA_opls.gro 4666 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/cgsim/rerun_BIandCGdih/cgpolyALA_opls.mdp 995 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/cgsim/rerun_BIandCGdih/cgpolyALA_opls.top 4820 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/cgsim/rerun_BIandCGdih/cgpolyALA_opls.tpr 10306 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/cgsim/rerun_BIandCGdih/mdout.mdp 29961 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/cgsim/rerun_BIandCGdih/table_d0.xvg 29789 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/cgsim/rerun_BIandCGdih/table_d1.xvg 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/cgsim/rerun_BIbond-angleref/ 3541 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/cgsim/rerun_BIbond-angleref/Protein_A.itp 585 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/cgsim/rerun_BIbond-angleref/cgpolyALA_opls.gro 4666 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/cgsim/rerun_BIbond-angleref/cgpolyALA_opls.mdp 995 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/cgsim/rerun_BIbond-angleref/cgpolyALA_opls.top 4584 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/cgsim/rerun_BIbond-angleref/cgpolyALA_opls.tpr 10306 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/cgsim/rerun_BIbond-angleref/mdout.mdp 7495 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/cgsim/rerun_BIbond-angleref/table_a0.xvg 24856 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/cgsim/rerun_BIbond-angleref/table_b0.xvg 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/cgsim/rerun_BIbond-angleref_CGdihref/ 3531 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/cgsim/rerun_BIbond-angleref_CGdihref/Protein_A.itp 585 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/cgsim/rerun_BIbond-angleref_CGdihref/cgpolyALA_opls.gro 4666 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/cgsim/rerun_BIbond-angleref_CGdihref/cgpolyALA_opls.mdp 995 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/cgsim/rerun_BIbond-angleref_CGdihref/cgpolyALA_opls.top 4788 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/cgsim/rerun_BIbond-angleref_CGdihref/cgpolyALA_opls.tpr 7495 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/cgsim/rerun_BIbond-angleref_CGdihref/table_a0.xvg 24856 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/cgsim/rerun_BIbond-angleref_CGdihref/table_b0.xvg 29822 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/cgsim/rerun_BIbond-angleref_CGdihref/table_d0.xvg 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/cgsim/rerun_CGdihref/ 3542 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/cgsim/rerun_CGdihref/Protein_A.itp 585 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/cgsim/rerun_CGdihref/cgpolyALA_opls.gro 4666 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/cgsim/rerun_CGdihref/cgpolyALA_opls.mdp 995 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/cgsim/rerun_CGdihref/cgpolyALA_opls.top 4616 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/cgsim/rerun_CGdihref/cgpolyALA_opls.tpr 10306 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/cgsim/rerun_CGdihref/mdout.mdp 29822 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/cgsim/rerun_CGdihref/table_d0.xvg 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/edit/ 737 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/edit/combine_tables.py 4681 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/edit/f_1-4.dat 6851 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/edit/f_1-5.dat 1085 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/edit/f_angle.dat 1116 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/edit/f_bond.dat 9729 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/edit/f_dih.dat 1085 11-09-2014 16:50 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ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/edit/tablep_1-4.xvg 145659 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/edit/tablep_1-5.xvg 1085 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/f_forces.Angle.total.angles.dat 1116 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/f_forces.BondStretch.total.bonds.dat 6200 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/f_forces.Dihedral.total.dihedrals.dat 4681 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/f_forces.IntraMolec_NB_Pair.total.intra_1-4.dat 6851 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/f_forces.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/f_forces.Pair_Interaction.total.pairs.dat 620 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/f_forces_coeff.Dihedral.total.dihedrals.dat 496 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/f_forces_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 713 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/f_forces_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/f_forces_coeff.Pair_Interaction.total.pairs.dat 1085 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/f_struct.Angle.total.angles.dat 1116 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/f_struct.BondStretch.total.bonds.dat 6200 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/f_struct.Dihedral.total.dihedrals.dat 4681 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/f_struct.IntraMolec_NB_Pair.total.intra_1-4.dat 6851 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/f_struct.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/f_struct.Pair_Interaction.total.pairs.dat 620 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/f_struct_coeff.Dihedral.total.dihedrals.dat 496 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/f_struct_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 713 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/f_struct_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/f_struct_coeff.Pair_Interaction.total.pairs.dat 1085 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/g.Angle.total.angles.dat 1116 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/g.BondStretch.total.bonds.dat 6200 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/g.Dihedral.total.dihedrals.dat 4681 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/g.IntraMolec_NB_Pair.total.intra_1-4.dat 6851 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/g.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/g.Pair_Interaction.total.pairs.dat 1085 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/g_cnt.Angle.total.angles.dat 1116 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/g_cnt.BondStretch.total.bonds.dat 6200 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/g_cnt.Dihedral.total.dihedrals.dat 4681 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/g_cnt.IntraMolec_NB_Pair.total.intra_1-4.dat 6851 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/g_cnt.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/g_cnt.Pair_Interaction.total.pairs.dat 620 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/g_cnt_coeff.Dihedral.total.dihedrals.dat 496 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/g_cnt_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 713 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/g_cnt_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/g_cnt_coeff.Pair_Interaction.total.pairs.dat 620 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/g_coeff.Dihedral.total.dihedrals.dat 496 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/g_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 713 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/g_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/g_coeff.Pair_Interaction.total.pairs.dat 102 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/inp.txt 38154 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/log.txt 4167 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/out.total.txt 1722 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/par.txt 1701 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/qsub.sh 25 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/save.FF.dat 7907 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/save.L.dat 1639086 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/save.M.dat 1624329 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/save.M2.dat 1668629 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/save.M_cnt.dat 8 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/save.Nf.dat 8029 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/save.b_forces.dat 8152 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/save.b_struct.dat 1624329 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/save.d2M.dat 8446 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/save.d2b.dat 7983 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/save.g.dat 7864 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/save.g_cnt.dat 7864 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/save.rescale.dat 6246 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5/summarize_input.txt 0 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/ 0 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/ 1085 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/L.Angle.total.angles.dat 1116 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/L.BondStretch.total.bonds.dat 4681 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/L.IntraMolec_NB_Pair.total.intra_1-4.dat 6851 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/L.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/L.Pair_Interaction.total.pairs.dat 496 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/L_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 713 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/L_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/L_coeff.Pair_Interaction.total.pairs.dat 3769 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/Protein_A.itp 2793 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/S.dat 1085 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/b_forces.Angle.total.angles.dat 1116 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/b_forces.BondStretch.total.bonds.dat 4681 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/b_forces.IntraMolec_NB_Pair.total.intra_1-4.dat 6851 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/b_forces.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/b_forces.Pair_Interaction.total.pairs.dat 496 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/b_forces_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 713 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/b_forces_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/b_forces_coeff.Pair_Interaction.total.pairs.dat 1085 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/b_struct.Angle.total.angles.dat 1116 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/b_struct.BondStretch.total.bonds.dat 4681 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/b_struct.IntraMolec_NB_Pair.total.intra_1-4.dat 6851 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/b_struct.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/b_struct.Pair_Interaction.total.pairs.dat 496 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/b_struct_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 713 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/b_struct_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/b_struct_coeff.Pair_Interaction.total.pairs.dat 115832 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/cgff-polyALA-FM_noH2O.o3846935 651 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/cgpolyALA_opls.gro 2091 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/cgpolyALA_opls.mdp 445 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/cgpolyALA_opls.top 4164 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/cgpolyALA_opls.tpr 0 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/cgsim/ 0 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/cgsim/Emin/ 338 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/cgsim/Emin/Emin_Commands.txt 4250 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/cgsim/Emin/Protein_A.itp 609 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/cgsim/Emin/cgpolyALA_opls.Emin.gro 585 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/cgsim/Emin/cgpolyALA_opls.gro 5200 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/cgsim/Emin/cgpolyALA_opls.tpr 39 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/cgsim/Emin/mart_polyALA_Equil_POSRES.o3846937 4667 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/cgsim/Emin/mart_trp_zip.Emin.mdp 995 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/cgsim/Emin/mart_trp_zip.top 10323 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/cgsim/Emin/mdout-cgpolyALA_opls.mdp 238 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/cgsim/Emin/qsub_cgsim_Emin.sh 2100 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/cgsim/Emin/run_gmx.sh 145654 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/cgsim/Emin/table.xvg 14982 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/cgsim/Emin/table_a0.xvg 66469 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/cgsim/Emin/table_b0.xvg 29916 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/cgsim/Emin/table_d0.xvg 149897 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/cgsim/Emin/tablep.xvg 0 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/cgsim/Equil/ 4250 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/cgsim/Equil/Protein_A.itp 5200 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/cgsim/Equil/cgpolyALA_opls.Equil.tpr 897 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/cgsim/Equil/cgpolyALA_opls.confout.gro 39 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/cgsim/Equil/mart_polyALA_Equil_POSRES.o3846940 4671 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/cgsim/Equil/mart_trp_zip.Equil.mdp 995 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/cgsim/Equil/mart_trp_zip.top 10325 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/cgsim/Equil/mdout-cgpolyALA_opls.mdp 238 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/cgsim/Equil/qsub_cgsim_Equil.sh 2129 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/cgsim/Equil/run_gmx.sh 5364 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/cgsim/Equil/state.cpt 145654 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/cgsim/Equil/table.xvg 14982 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/cgsim/Equil/table_a0.xvg 66469 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/cgsim/Equil/table_b0.xvg 29916 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/cgsim/Equil/table_d0.xvg 149897 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/cgsim/Equil/tablep.xvg 0 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/cgsim/Prod_run/ 4250 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/cgsim/Prod_run/Protein_A.itp 59000671 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/cgsim/Prod_run/Rg.xvg 1307 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/cgsim/Prod_run/Tick_Marks_Rg_Q_scatter.m 1337 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/cgsim/Prod_run/Tick_Marks_Rg_rmsd_scatter.m 2185 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/cgsim/Prod_run/angles.xvg 12540 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/cgsim/Prod_run/bonds.xvg 7695 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/cgsim/Prod_run/bonds_1-4_all.xvg 9861 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/cgsim/Prod_run/bonds_1-5_all.xvg 1816 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/cgsim/Prod_run/calc_dist.sh 2106 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/cgsim/Prod_run/calc_dist_all1-4bonds.sh 1653 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/cgsim/Prod_run/calc_dist_old.sh 0 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/cgsim/Prod_run/cgff/ 3769 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/cgsim/Prod_run/cgff/Protein_A.itp 651 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/cgsim/Prod_run/cgff/cgpolyALA_opls.gro 2091 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/cgsim/Prod_run/cgff/cgpolyALA_opls.mdp 445 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/cgsim/Prod_run/cgff/cgpolyALA_opls.top 4164 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/cgsim/Prod_run/cgff/cgpolyALA_opls.tpr 80 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/cgsim/Prod_run/cgff/inp.txt 1816 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/cgsim/Prod_run/cgff/par.txt 2068 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/cgsim/Prod_run/cgff/qsub_cgff_iter.sh 897 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/cgsim/Prod_run/cgpolyALA_opls.confout.gro 585 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/cgsim/Prod_run/cgpolyALA_opls.gro 5200 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/cgsim/Prod_run/cgpolyALA_opls.tpr 2852 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/cgsim/Prod_run/dihedrals.xvg 19890021 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/cgsim/Prod_run/distance.xvg 2049 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/cgsim/Prod_run/helicity.py 1745 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/cgsim/Prod_run/index.ndx 558 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/cgsim/Prod_run/index_dist.ndx 524 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/cgsim/Prod_run/index_dist_all1-4bonds.ndx 39 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/cgsim/Prod_run/mart_polyALA_Equil_PRODRUN.o3847079 4661 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/cgsim/Prod_run/mart_trp_zip.mdp 995 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/cgsim/Prod_run/mart_trp_zip.top 10317 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/cgsim/Prod_run/mdout-cgpolyALA_opls.mdp 239 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/cgsim/Prod_run/qsub_cgsim_NVT.sh 10300 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/cgsim/Prod_run/rdf_CA-CA.xvg 17662941 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/cgsim/Prod_run/rmsd.xvg 585 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/cgsim/Prod_run/rmsf.xvg 2115 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/cgsim/Prod_run/run_gmx.sh 363 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/cgsim/Prod_run/scatter.py 5360 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/cgsim/Prod_run/state.cpt 5360 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/cgsim/Prod_run/state_prev.cpt 145654 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/cgsim/Prod_run/table.xvg 14982 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/cgsim/Prod_run/table_a0.xvg 66469 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/cgsim/Prod_run/table_b0.xvg 29916 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/cgsim/Prod_run/table_d0.xvg 149897 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/cgsim/Prod_run/tablep.xvg 0 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/edit/ 957 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/edit/combine_dih.py 737 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/edit/combine_tables.py 4681 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/edit/f_1-4.dat 6851 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/edit/f_1-5.dat 1085 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/edit/f_angle.dat 1116 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/edit/f_bond.dat 14943 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/edit/f_dih.dat 1085 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/edit/f_forces.Angle.total.angles.dat 1116 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/edit/f_forces.BondStretch.total.bonds.dat 22351 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/edit/f_forces.Dihedral.total.dihedrals.dat 4681 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/edit/f_forces.IntraMolec_NB_Pair.total.intra_1-4.dat 6851 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/edit/f_forces.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/edit/f_forces.Pair_Interaction.total.pairs.dat 5921 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/edit/f_pairs.dat 799 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/edit/run.make_gmx4_table.sh 145654 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/edit/table.xvg 14982 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/edit/table_a0.xvg 66469 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/edit/table_b0.xvg 29916 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/edit/table_d0.xvg 29961 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/edit/table_d0_ref1.xvg 29789 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/edit/table_d0_ref2.xvg 149897 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/edit/tablep.xvg 146847 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/edit/tablep_1-4.xvg 145644 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/edit/tablep_1-5.xvg 1085 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/f_forces.Angle.total.angles.dat 1116 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/f_forces.BondStretch.total.bonds.dat 22351 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/f_forces.Dihedral.total.dihedrals.dat 4681 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/f_forces.IntraMolec_NB_Pair.total.intra_1-4.dat 6851 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/f_forces.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/f_forces.Pair_Interaction.total.pairs.dat 496 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/f_forces_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 713 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/f_forces_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/f_forces_coeff.Pair_Interaction.total.pairs.dat 1085 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/f_struct.Angle.total.angles.dat 1116 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/f_struct.BondStretch.total.bonds.dat 22351 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/f_struct.Dihedral.total.dihedrals.dat 4681 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/f_struct.IntraMolec_NB_Pair.total.intra_1-4.dat 6851 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/f_struct.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/f_struct.Pair_Interaction.total.pairs.dat 496 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/f_struct_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 713 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/f_struct_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/f_struct_coeff.Pair_Interaction.total.pairs.dat 1085 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/g.Angle.total.angles.dat 1116 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/g.BondStretch.total.bonds.dat 4681 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/g.IntraMolec_NB_Pair.total.intra_1-4.dat 6851 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/g.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/g.Pair_Interaction.total.pairs.dat 1085 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/g_cnt.Angle.total.angles.dat 1116 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/g_cnt.BondStretch.total.bonds.dat 4681 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/g_cnt.IntraMolec_NB_Pair.total.intra_1-4.dat 6851 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/g_cnt.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/g_cnt.Pair_Interaction.total.pairs.dat 496 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/g_cnt_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 713 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/g_cnt_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/g_cnt_coeff.Pair_Interaction.total.pairs.dat 496 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/g_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 713 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/g_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/g_coeff.Pair_Interaction.total.pairs.dat 105 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/inp.txt 31942 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/log.txt 4821 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/out.total.txt 1702 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/par.txt 2068 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/qsub.sh 25 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/save.FF.dat 6577 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/save.L.dat 1130005 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/save.M.dat 1120925 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/save.M2.dat 1154523 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/save.M_cnt.dat 8 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/save.Nf.dat 6670 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/save.b_forces.dat 6782 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/save.b_struct.dat 1120933 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/save.d2M.dat 7036 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/save.d2b.dat 6621 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/save.g.dat 6532 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/save.g_cnt.dat 6532 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/save.rescale.dat 6272 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter0/summarize_input.txt 0 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/ 1120925 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/M2.dat 3769 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/Protein_A.itp 2352 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/S.dat 2352 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/S_CONST.dat 493 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/bAA.angles.dat 595 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/bAA.bonds.dat 51 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/bAA.dihedrals.dat 187 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/bAA.intra_1-4.dat 238 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/bAA.intra_1-5.dat 340 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/bAA.pairs.dat 493 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/b_soln_err.angles.dat 595 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/b_soln_err.bonds.dat 51 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/b_soln_err.dihedrals.dat 187 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/b_soln_err.intra_1-4.dat 238 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/b_soln_err.intra_1-5.dat 340 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/b_soln_err.pairs.dat 2007 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgff-polyALA-FM_noH2O.o3846368 651 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgpolyALA_opls.gro 2091 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgpolyALA_opls.mdp 445 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgpolyALA_opls.top 4164 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgpolyALA_opls.tpr 0 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/ 0 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Emin/ 338 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Emin/Emin_Commands.txt 4250 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Emin/Protein_A.itp 609 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Emin/cgpolyALA_opls.Emin.gro 585 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Emin/cgpolyALA_opls.gro 5200 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Emin/cgpolyALA_opls.tpr 39 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Emin/mart_polyALA_Equil_POSRES.o3846773 4667 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Emin/mart_trp_zip.Emin.mdp 995 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Emin/mart_trp_zip.top 10323 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Emin/mdout-cgpolyALA_opls.mdp 238 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Emin/qsub_cgsim_Emin.sh 2100 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Emin/run_gmx.sh 145911 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Emin/table.xvg 14980 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Emin/table_a0.xvg 66469 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Emin/table_b0.xvg 29959 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Emin/table_d0.xvg 151042 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Emin/tablep.xvg 0 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Equil/ 4250 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Equil/Protein_A.itp 5200 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Equil/cgpolyALA_opls.Equil.tpr 897 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Equil/cgpolyALA_opls.confout.gro 39 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Equil/mart_polyALA_Equil_POSRES.o3846774 4671 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Equil/mart_trp_zip.Equil.mdp 995 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Equil/mart_trp_zip.top 10325 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Equil/mdout-cgpolyALA_opls.mdp 238 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Equil/qsub_cgsim_Equil.sh 2129 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Equil/run_gmx.sh 5364 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Equil/state.cpt 145911 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Equil/table.xvg 14980 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Equil/table_a0.xvg 66469 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Equil/table_b0.xvg 29959 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Equil/table_d0.xvg 151042 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Equil/tablep.xvg 0 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Prod_run/ 4250 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Prod_run/Protein_A.itp 59000655 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Prod_run/Rg.xvg 1307 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Prod_run/Tick_Marks_Rg_Q_scatter.m 1337 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Prod_run/Tick_Marks_Rg_rmsd_scatter.m 1771 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Prod_run/angles.xvg 11419 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Prod_run/bonds.xvg 7145 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Prod_run/bonds_1-4.xvg 4446 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Prod_run/bonds_1-4_all.xvg 4142 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Prod_run/bonds_1-5_all.xvg 6079 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Prod_run/bonds_2-5.xvg 6115 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Prod_run/bonds_3-6.xvg 5798 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Prod_run/bonds_4-7.xvg 5739 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Prod_run/bonds_5-8.xvg 6251 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Prod_run/bonds_6-9.xvg 6155 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Prod_run/bonds_7-10.xvg 5819 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Prod_run/bonds_8-11.xvg 6843 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Prod_run/bonds_9-12.xvg 1816 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Prod_run/calc_dist.sh 2106 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Prod_run/calc_dist_all1-4bonds.sh 1653 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Prod_run/calc_dist_old.sh 0 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Prod_run/cgff/ 3769 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Prod_run/cgff/Protein_A.itp 651 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Prod_run/cgff/cgpolyALA_opls.gro 2091 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Prod_run/cgff/cgpolyALA_opls.mdp 445 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Prod_run/cgff/cgpolyALA_opls.top 4164 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Prod_run/cgff/cgpolyALA_opls.tpr 80 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Prod_run/cgff/inp.txt 1816 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Prod_run/cgff/par.txt 2068 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Prod_run/cgff/qsub_cgff_iter.sh 897 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Prod_run/cgpolyALA_opls.confout.gro 585 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Prod_run/cgpolyALA_opls.gro 5200 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Prod_run/cgpolyALA_opls.tpr 1311 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Prod_run/dihedrals.xvg 19890021 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Prod_run/distance.xvg 19890513 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Prod_run/distance_bonds_1-4.dat.xvg 19890491 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Prod_run/distance_bonds_2-5.dat.xvg 19890489 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Prod_run/distance_bonds_3-6.dat.xvg 19890506 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Prod_run/distance_bonds_4-7.dat.xvg 19890474 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Prod_run/distance_bonds_5-8.dat.xvg 19890491 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Prod_run/distance_bonds_6-9.dat.xvg 19890511 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Prod_run/distance_bonds_7-10.dat.xvg 19890508 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Prod_run/distance_bonds_8-11.dat.xvg 19890476 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Prod_run/distance_bonds_9-12.dat.xvg 2049 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Prod_run/helicity.py 1745 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Prod_run/index.ndx 558 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Prod_run/index_dist.ndx 524 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Prod_run/index_dist_all1-4bonds.ndx 39 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Prod_run/mart_polyALA_Equil_PRODRUN.o3846776 4661 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Prod_run/mart_trp_zip.mdp 995 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Prod_run/mart_trp_zip.top 10317 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Prod_run/mdout-cgpolyALA_opls.mdp 239 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Prod_run/qsub_cgsim_NVT.sh 10312 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Prod_run/rdf_CA-CA.xvg 18578219 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Prod_run/rmsd.xvg 585 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Prod_run/rmsf.xvg 2115 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Prod_run/run_gmx.sh 363 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Prod_run/scatter.py 5360 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Prod_run/state.cpt 5360 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Prod_run/state_prev.cpt 145911 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Prod_run/table.xvg 14980 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Prod_run/table_a0.xvg 66469 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Prod_run/table_b0.xvg 29959 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Prod_run/table_d0.xvg 151042 11-09-2014 16:50 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/cgsim/Prod_run/tablep.xvg 0 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/edit/ 512 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/edit/calc_avgerr.py 1456 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/edit/calc_lambda_1-4.py 1456 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/edit/calc_lambda_1-5.py 1450 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/edit/calc_lambda_angle.py 1448 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/edit/calc_lambda_bond.py 1456 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/edit/calc_lambda_dih.py 1448 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/edit/calc_lambda_pairs.py 722 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/edit/combine_dih.py 737 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/edit/combine_tables.py 24 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/edit/error.txt 3131 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/edit/f_1-4.dat 1823 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/edit/f_1-4_lambda.dat 4061 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/edit/f_1-5.dat 2406 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/edit/f_1-5_lambda.dat 899 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/edit/f_angle.dat 513 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/edit/f_angle_lambda.dat 1085 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/edit/f_bond.dat 651 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/edit/f_bond_lambda.dat 14252 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/edit/f_dih.dat 14252 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/edit/f_dih_lambda.dat 899 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/edit/f_forces.Angle.total.angles.dat 1085 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/edit/f_forces.BondStretch.total.bonds.dat 22351 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/edit/f_forces.Dihedral.total.dihedrals.dat 3131 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/edit/f_forces.IntraMolec_NB_Pair.total.intra_1-4.dat 4061 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/edit/f_forces.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/edit/f_forces.Pair_Interaction.total.pairs.dat 5921 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/edit/f_pairs.dat 3326 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/edit/f_pairs_lambda.dat 30 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/edit/lam.txt 5 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/edit/lam_min.txt 30 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/edit/lam_old.txt 841 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/edit/run.make_gmx4_table.sh 918 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/edit/scale_lambda_1-4.py 839 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/edit/scale_lambda_1-4_force.py 918 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/edit/scale_lambda_1-5.py 839 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/edit/scale_lambda_1-5_force.py 918 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/edit/scale_lambda_angle.py 830 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/edit/scale_lambda_angle_force.py 917 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/edit/scale_lambda_bond.py 827 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/edit/scale_lambda_bond_force.py 916 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/edit/scale_lambda_dih.py 839 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/edit/scale_lambda_dih_force.py 915 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/edit/scale_lambda_pairs.py 827 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/edit/scale_lambda_pairs_force.py 145911 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/edit/table.xvg 14980 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/edit/table_a0.xvg 14981 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/edit/table_a0_old.xvg 66469 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/edit/table_b0.xvg 66469 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/edit/table_b0_old.xvg 29959 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/edit/table_d0.xvg 29958 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/edit/table_d0_old.xvg 29961 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/edit/table_d0_ref.xvg 145686 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/edit/table_old.xvg 151042 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/edit/tablep.xvg 146843 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/edit/tablep_1-4.xvg 146845 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/edit/tablep_1-4_old.xvg 146792 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/edit/tablep_1-5.xvg 145650 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/edit/tablep_1-5_old.xvg 899 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/f_forces.Angle.total.angles.dat 1085 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/f_forces.BondStretch.total.bonds.dat 22351 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/f_forces.Dihedral.total.dihedrals.dat 3131 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/f_forces.IntraMolec_NB_Pair.total.intra_1-4.dat 4061 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/f_forces.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/f_forces.Pair_Interaction.total.pairs.dat 341 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/f_forces_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 434 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/f_forces_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/f_forces_coeff.Pair_Interaction.total.pairs.dat 899 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/f_struct.Angle.total.angles.dat 1085 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/f_struct.BondStretch.total.bonds.dat 22351 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/f_struct.Dihedral.total.dihedrals.dat 3131 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/f_struct.IntraMolec_NB_Pair.total.intra_1-4.dat 4061 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/f_struct.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/f_struct.Pair_Interaction.total.pairs.dat 341 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/f_struct_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 434 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/f_struct_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/f_struct_coeff.Pair_Interaction.total.pairs.dat 0 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/force_files/ 1085 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/force_files/f_forces.Angle.total.angles.dat 1116 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/force_files/f_forces.BondStretch.total.bonds.dat 22351 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/force_files/f_forces.Dihedral.total.dihedrals.dat 4681 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/force_files/f_forces.IntraMolec_NB_Pair.total.intra_1-4.dat 6851 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/force_files/f_forces.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/force_files/f_forces.Pair_Interaction.total.pairs.dat 33 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/force_files/f_forces_coeff.Dihedral.total.dihedrals.dat 496 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/force_files/f_forces_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 713 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/force_files/f_forces_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/force_files/f_forces_coeff.Pair_Interaction.total.pairs.dat 527 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/force_files/force_imin1.angles.dat 399 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/force_files/force_imin1.bonds.dat 60 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/force_files/force_imin1.dihedrals.dat 147 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/force_files/force_imin1.intra_1-4.dat 198 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/force_files/force_imin1.intra_1-5.dat 175 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/force_files/force_imin1.pairs.dat 1383 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/force_files/make_force_file.py 514 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/force_i.angles.dat 616 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/force_i.bonds.dat 71 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/force_i.dihedrals.dat 208 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/force_i.intra_1-4.dat 259 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/force_i.intra_1-5.dat 361 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/force_i.pairs.dat 254 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/force_i_scale.angles.dat 382 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/force_i_scale.bonds.dat 35 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/force_i_scale.dihedrals.dat 123 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/force_i_scale.intra_1-4.dat 155 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/force_i_scale.intra_1-5.dat 204 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/force_i_scale.pairs.dat 527 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/force_imin1.angles.dat 399 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/force_imin1.bonds.dat 60 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/force_imin1.dihedrals.dat 147 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/force_imin1.intra_1-4.dat 198 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/force_imin1.intra_1-5.dat 175 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/force_imin1.pairs.dat 514 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/force_imin1_check.angles.dat 616 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/force_imin1_check.bonds.dat 71 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/force_imin1_check.dihedrals.dat 208 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/force_imin1_check.intra_1-4.dat 259 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/force_imin1_check.intra_1-5.dat 361 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/force_imin1_check.pairs.dat 107 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/inp.txt 31673 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/log.txt 2993 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/out.total.txt 1866 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/par.txt 2068 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/qsub_cgff_iter.sh 25 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/save.FF.dat 6577 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/save.L.dat 1126970 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/save.M.dat 1120925 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/save.M2.dat 1149155 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/save.M_cnt.dat 8 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/save.Nf.dat 6665 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/save.b_forces.dat 6781 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/save.b_struct.dat 1120933 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/save.d2M.dat 7038 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/save.d2b.dat 6622 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/save.g.dat 6533 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/save.g_cnt.dat 6532 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/save.rescale.dat 6553 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter1/summarize_input.txt 6073 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/iter_dodecapeptide_lambda_BIbond-angleref_CGdihref.sh 275 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIandCGdih/qsub.sh 0 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/ 0 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/ 1116 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/L.BondStretch.total.bonds.dat 6200 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/L.Dihedral.total.dihedrals.dat 4681 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/L.IntraMolec_NB_Pair.total.intra_1-4.dat 6851 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/L.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/L.Pair_Interaction.total.pairs.dat 620 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/L_coeff.Dihedral.total.dihedrals.dat 496 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/L_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 713 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/L_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/L_coeff.Pair_Interaction.total.pairs.dat 3781 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/Protein_A.itp 2415 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/S.dat 0 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/S_CONST.dat 1116 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/b_forces.BondStretch.total.bonds.dat 6200 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/b_forces.Dihedral.total.dihedrals.dat 4681 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/b_forces.IntraMolec_NB_Pair.total.intra_1-4.dat 6851 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/b_forces.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/b_forces.Pair_Interaction.total.pairs.dat 620 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/b_forces_coeff.Dihedral.total.dihedrals.dat 496 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/b_forces_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 713 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/b_forces_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/b_forces_coeff.Pair_Interaction.total.pairs.dat 1116 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/b_struct.BondStretch.total.bonds.dat 6200 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/b_struct.Dihedral.total.dihedrals.dat 4681 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/b_struct.IntraMolec_NB_Pair.total.intra_1-4.dat 6851 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/b_struct.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/b_struct.Pair_Interaction.total.pairs.dat 620 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/b_struct_coeff.Dihedral.total.dihedrals.dat 496 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/b_struct_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 713 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/b_struct_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/b_struct_coeff.Pair_Interaction.total.pairs.dat 115832 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgff-polyALA-FM_noH2O.o3846858 651 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgpolyALA_opls.gro 2091 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgpolyALA_opls.mdp 445 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgpolyALA_opls.top 5020 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgpolyALA_opls.tpr 0 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/ 0 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Emin/ 338 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Emin/Emin_Commands.txt 4250 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Emin/Protein_A.itp 609 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Emin/cgpolyALA_opls.Emin.gro 585 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Emin/cgpolyALA_opls.gro 5200 11-09-2014 16:51 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ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Emin/qsub.sh 238 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Emin/qsub_xj.sh 2102 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Emin/run_gmx.sh 145686 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Emin/table.xvg 14981 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Emin/table_a0.xvg 66469 11-09-2014 16:51 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ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Equil/cgpolyALA_opls.Equil.tpr 897 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Equil/cgpolyALA_opls.confout.gro 103 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Equil/mart_polyALA_Equil_POSRES.o3107616 4671 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Equil/mart_trp_zip.Equil.mdp 995 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Equil/mart_trp_zip.top 10325 11-09-2014 16:51 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ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/cgff/L.BondStretch.total.bonds.dat 3131 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/cgff/L.IntraMolec_NB_Pair.total.intra_1-4.dat 4061 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/cgff/L.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/cgff/L.Pair_Interaction.total.pairs.dat 341 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/cgff/L_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 434 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/cgff/L_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/cgff/L_coeff.Pair_Interaction.total.pairs.dat 3769 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/cgff/Protein_A.itp 2352 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/cgff/S.dat 899 11-09-2014 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ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/cgff/b_forces.Pair_Interaction.total.pairs.dat 341 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/cgff/b_forces_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 434 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/cgff/b_forces_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/cgff/b_forces_coeff.Pair_Interaction.total.pairs.dat 899 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/cgff/b_struct.Angle.total.angles.dat 1085 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/cgff/b_struct.BondStretch.total.bonds.dat 3131 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/cgff/b_struct.IntraMolec_NB_Pair.total.intra_1-4.dat 4061 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/cgff/b_struct.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/cgff/b_struct.Pair_Interaction.total.pairs.dat 341 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/cgff/b_struct_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 434 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/cgff/b_struct_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/cgff/b_struct_coeff.Pair_Interaction.total.pairs.dat 97148 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/cgff/cgff-polyALA-FM_noH2O.o3846357 651 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/cgff/cgpolyALA_opls.gro 2091 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/cgff/cgpolyALA_opls.mdp 445 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/cgff/cgpolyALA_opls.top 4164 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/cgff/cgpolyALA_opls.tpr 899 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/cgff/f_forces.Angle.total.angles.dat 1085 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/cgff/f_forces.BondStretch.total.bonds.dat 22351 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/cgff/f_forces.Dihedral.total.dihedrals.dat 3131 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/cgff/f_forces.IntraMolec_NB_Pair.total.intra_1-4.dat 4061 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/cgff/f_forces.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/cgff/f_forces.Pair_Interaction.total.pairs.dat 341 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/cgff/f_forces_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 434 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/cgff/f_forces_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/cgff/f_forces_coeff.Pair_Interaction.total.pairs.dat 899 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/cgff/f_struct.Angle.total.angles.dat 1085 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/cgff/f_struct.BondStretch.total.bonds.dat 22351 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/cgff/f_struct.Dihedral.total.dihedrals.dat 3131 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/cgff/f_struct.IntraMolec_NB_Pair.total.intra_1-4.dat 4061 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/cgff/f_struct.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/cgff/f_struct.Pair_Interaction.total.pairs.dat 341 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/cgff/f_struct_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 434 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/cgff/f_struct_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/cgff/f_struct_coeff.Pair_Interaction.total.pairs.dat 899 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/cgff/g.Angle.total.angles.dat 1085 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/cgff/g.BondStretch.total.bonds.dat 3131 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/cgff/g.IntraMolec_NB_Pair.total.intra_1-4.dat 4061 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/cgff/g.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/cgff/g.Pair_Interaction.total.pairs.dat 899 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/cgff/g_cnt.Angle.total.angles.dat 1085 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/cgff/g_cnt.BondStretch.total.bonds.dat 3131 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/cgff/g_cnt.IntraMolec_NB_Pair.total.intra_1-4.dat 4061 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/cgff/g_cnt.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/cgff/g_cnt.Pair_Interaction.total.pairs.dat 341 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/cgff/g_cnt_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 434 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/cgff/g_cnt_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/cgff/g_cnt_coeff.Pair_Interaction.total.pairs.dat 341 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/cgff/g_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 434 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/cgff/g_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/cgff/g_coeff.Pair_Interaction.total.pairs.dat 82 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/cgff/inp.txt 31393 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/cgff/log.txt 4826 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/cgff/out.total.txt 1699 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/cgff/par.txt 2068 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/cgff/qsub.sh 24 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/cgff/save.FF.dat 6562 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/cgff/save.L.dat 1126970 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/cgff/save.M.dat 1120925 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/cgff/save.M2.dat 1149155 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/cgff/save.M_cnt.dat 8 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/cgff/save.Nf.dat 6641 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/cgff/save.b_forces.dat 6807 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/cgff/save.b_struct.dat 1120933 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/cgff/save.d2M.dat 6861 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/cgff/save.d2b.dat 6596 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/cgff/save.g.dat 6533 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/cgff/save.g_cnt.dat 6533 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/cgff/save.rescale.dat 5960 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/cgff/summarize_input.txt 897 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/cgpolyALA_opls.confout.gro 585 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/cgpolyALA_opls.gro 5200 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/cgpolyALA_opls.tpr 2851 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/dihedrals.xvg 10890457 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/distance.xvg 10890020 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/distance_bonds_1-4.dat.xvg 10890020 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/distance_bonds_2-5.dat.xvg 10890020 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/distance_bonds_3-6.dat.xvg 10890020 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/distance_bonds_4-7.dat.xvg 10890020 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/distance_bonds_5-8.dat.xvg 10890020 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/distance_bonds_6-9.dat.xvg 10890020 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/distance_bonds_7-10.dat.xvg 10890020 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/distance_bonds_8-11.dat.xvg 10890020 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/Prod_run/distance_bonds_9-12.dat.xvg 2049 11-09-2014 16:51 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29822 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/rerun_BIbond-angleref_CGdihref/table_d0.xvg 0 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/rerun_CGdihref/ 3542 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/rerun_CGdihref/Protein_A.itp 585 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/rerun_CGdihref/cgpolyALA_opls.gro 4666 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/cgsim/rerun_CGdihref/cgpolyALA_opls.mdp 995 11-09-2014 16:51 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24856 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/edit/table_b0_ref.xvg 0 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/edit/table_d0.xvg 146846 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/edit/tablep_1-4.xvg 145658 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/edit/tablep_1-5.xvg 1116 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/f_forces.BondStretch.total.bonds.dat 6200 11-09-2014 16:51 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ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/f_struct.IntraMolec_NB_Pair.total.intra_1-4.dat 6851 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/f_struct.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/f_struct.Pair_Interaction.total.pairs.dat 620 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/f_struct_coeff.Dihedral.total.dihedrals.dat 496 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/f_struct_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 713 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/f_struct_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/f_struct_coeff.Pair_Interaction.total.pairs.dat 1116 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/g.BondStretch.total.bonds.dat 6200 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/g.Dihedral.total.dihedrals.dat 4681 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/g.IntraMolec_NB_Pair.total.intra_1-4.dat 6851 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/g.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/g.Pair_Interaction.total.pairs.dat 1116 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/g_cnt.BondStretch.total.bonds.dat 6200 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/g_cnt.Dihedral.total.dihedrals.dat 4681 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/g_cnt.IntraMolec_NB_Pair.total.intra_1-4.dat 6851 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/g_cnt.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/g_cnt.Pair_Interaction.total.pairs.dat 620 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/g_cnt_coeff.Dihedral.total.dihedrals.dat 496 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/g_cnt_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 713 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/g_cnt_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/g_cnt_coeff.Pair_Interaction.total.pairs.dat 620 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/g_coeff.Dihedral.total.dihedrals.dat 496 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/g_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 713 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/g_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/g_coeff.Pair_Interaction.total.pairs.dat 105 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/inp.txt 28371 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/log.txt 3445 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/out.total.txt 1727 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/par.txt 2068 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/qsub.sh 25 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/save.FF.dat 5738 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/save.L.dat 877696 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/save.M.dat 869307 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/save.M2.dat 897712 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/save.M_cnt.dat 8 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/save.Nf.dat 5818 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/save.b_forces.dat 5892 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/save.b_struct.dat 869307 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/save.d2M.dat 6170 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/save.d2b.dat 5851 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/save.g.dat 5755 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/save.g_cnt.dat 5755 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/save.rescale.dat 5880 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter0/summarize_input.txt 0 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/ 1120925 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/M2.dat 3769 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/Protein_A.itp 2352 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/S.dat 2352 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/S_CONST.dat 493 11-09-2014 16:51 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11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/cgsim/Emin/cgpolyALA_opls.gro 5200 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/cgsim/Emin/cgpolyALA_opls.tpr 39 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/cgsim/Emin/mart_polyALA_Equil_POSRES.o3846773 4667 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/cgsim/Emin/mart_trp_zip.Emin.mdp 995 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/cgsim/Emin/mart_trp_zip.top 10323 11-09-2014 16:51 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ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/cgsim/Equil/cgpolyALA_opls.Equil.tpr 897 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/cgsim/Equil/cgpolyALA_opls.confout.gro 39 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/cgsim/Equil/mart_polyALA_Equil_POSRES.o3846774 4671 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/cgsim/Equil/mart_trp_zip.Equil.mdp 995 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/cgsim/Equil/mart_trp_zip.top 10325 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/cgsim/Equil/mdout-cgpolyALA_opls.mdp 238 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/cgsim/Equil/qsub_cgsim_Equil.sh 2129 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/cgsim/Equil/run_gmx.sh 5364 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/cgsim/Equil/state.cpt 145911 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/cgsim/Equil/table.xvg 14980 11-09-2014 16:51 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ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/cgsim/Prod_run/Protein_A.itp 59000655 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/cgsim/Prod_run/Rg.xvg 1307 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/cgsim/Prod_run/Tick_Marks_Rg_Q_scatter.m 1337 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/cgsim/Prod_run/Tick_Marks_Rg_rmsd_scatter.m 1771 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/cgsim/Prod_run/angles.xvg 11419 11-09-2014 16:51 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ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/cgsim/Prod_run/bonds_3-6.xvg 5798 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/cgsim/Prod_run/bonds_4-7.xvg 5739 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/cgsim/Prod_run/bonds_5-8.xvg 6251 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/cgsim/Prod_run/bonds_6-9.xvg 6155 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/cgsim/Prod_run/bonds_7-10.xvg 5819 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/cgsim/Prod_run/bonds_8-11.xvg 6843 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/cgsim/Prod_run/bonds_9-12.xvg 1816 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/cgsim/Prod_run/calc_dist.sh 2106 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/cgsim/Prod_run/calc_dist_all1-4bonds.sh 1653 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/cgsim/Prod_run/calc_dist_old.sh 0 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/cgsim/Prod_run/cgff/ 3769 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/cgsim/Prod_run/cgff/Protein_A.itp 651 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/cgsim/Prod_run/cgff/cgpolyALA_opls.gro 2091 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/cgsim/Prod_run/cgff/cgpolyALA_opls.mdp 445 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/cgsim/Prod_run/cgff/cgpolyALA_opls.top 4164 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/cgsim/Prod_run/cgff/cgpolyALA_opls.tpr 80 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/cgsim/Prod_run/cgff/inp.txt 1816 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/cgsim/Prod_run/cgff/par.txt 2068 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/cgsim/Prod_run/cgff/qsub_cgff_iter.sh 897 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/cgsim/Prod_run/cgpolyALA_opls.confout.gro 585 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/cgsim/Prod_run/cgpolyALA_opls.gro 5200 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/cgsim/Prod_run/cgpolyALA_opls.tpr 1311 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/cgsim/Prod_run/dihedrals.xvg 19890021 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/cgsim/Prod_run/distance.xvg 19890513 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/cgsim/Prod_run/distance_bonds_1-4.dat.xvg 19890491 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/cgsim/Prod_run/distance_bonds_2-5.dat.xvg 19890489 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/cgsim/Prod_run/distance_bonds_3-6.dat.xvg 19890506 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/cgsim/Prod_run/distance_bonds_4-7.dat.xvg 19890474 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/cgsim/Prod_run/distance_bonds_5-8.dat.xvg 19890491 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/cgsim/Prod_run/distance_bonds_6-9.dat.xvg 19890511 11-09-2014 16:51 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ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/cgsim/Prod_run/run_gmx.sh 363 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/cgsim/Prod_run/scatter.py 5360 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/cgsim/Prod_run/state.cpt 5360 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/cgsim/Prod_run/state_prev.cpt 145911 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/cgsim/Prod_run/table.xvg 14980 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/cgsim/Prod_run/table_a0.xvg 66469 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/cgsim/Prod_run/table_b0.xvg 29959 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/cgsim/Prod_run/table_d0.xvg 151042 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/cgsim/Prod_run/tablep.xvg 0 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/edit/ 512 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/edit/calc_avgerr.py 1456 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/edit/calc_lambda_1-4.py 1456 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/edit/calc_lambda_1-5.py 1450 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/edit/calc_lambda_angle.py 1448 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/edit/calc_lambda_bond.py 1456 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/edit/calc_lambda_dih.py 1448 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/edit/calc_lambda_pairs.py 722 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/edit/combine_dih.py 737 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/edit/combine_tables.py 24 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/edit/error.txt 3131 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/edit/f_1-4.dat 1823 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/edit/f_1-4_lambda.dat 4061 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/edit/f_1-5.dat 2406 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/edit/f_1-5_lambda.dat 899 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/edit/f_angle.dat 513 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/edit/f_angle_lambda.dat 1085 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/edit/f_bond.dat 651 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/edit/f_bond_lambda.dat 14252 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/edit/f_dih.dat 14252 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/edit/f_dih_lambda.dat 899 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/edit/f_forces.Angle.total.angles.dat 1085 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/edit/f_forces.BondStretch.total.bonds.dat 22351 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/edit/f_forces.Dihedral.total.dihedrals.dat 3131 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/edit/f_forces.IntraMolec_NB_Pair.total.intra_1-4.dat 4061 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/edit/f_forces.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/edit/f_forces.Pair_Interaction.total.pairs.dat 5921 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/edit/f_pairs.dat 3326 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/edit/f_pairs_lambda.dat 30 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/edit/lam.txt 5 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/edit/lam_min.txt 30 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/edit/lam_old.txt 841 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/edit/run.make_gmx4_table.sh 918 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/edit/scale_lambda_1-4.py 839 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/edit/scale_lambda_1-4_force.py 918 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/edit/scale_lambda_1-5.py 839 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/edit/scale_lambda_1-5_force.py 918 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/edit/scale_lambda_angle.py 830 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/edit/scale_lambda_angle_force.py 917 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/edit/scale_lambda_bond.py 827 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/edit/scale_lambda_bond_force.py 916 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/edit/scale_lambda_dih.py 839 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/edit/scale_lambda_dih_force.py 915 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/edit/scale_lambda_pairs.py 827 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/edit/scale_lambda_pairs_force.py 145911 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/edit/table.xvg 14980 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/edit/table_a0.xvg 14981 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/edit/table_a0_old.xvg 66469 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/edit/table_b0.xvg 66469 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/edit/table_b0_old.xvg 29959 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/edit/table_d0.xvg 29958 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/edit/table_d0_old.xvg 29961 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/edit/table_d0_ref.xvg 145686 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/edit/table_old.xvg 151042 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/edit/tablep.xvg 146843 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/edit/tablep_1-4.xvg 146845 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/edit/tablep_1-4_old.xvg 146792 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/edit/tablep_1-5.xvg 145650 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/edit/tablep_1-5_old.xvg 899 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/f_forces.Angle.total.angles.dat 1085 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/f_forces.BondStretch.total.bonds.dat 22351 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/f_forces.Dihedral.total.dihedrals.dat 3131 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/f_forces.IntraMolec_NB_Pair.total.intra_1-4.dat 4061 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/f_forces.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/f_forces.Pair_Interaction.total.pairs.dat 341 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/f_forces_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 434 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/f_forces_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/f_forces_coeff.Pair_Interaction.total.pairs.dat 899 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/f_struct.Angle.total.angles.dat 1085 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/f_struct.BondStretch.total.bonds.dat 22351 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/f_struct.Dihedral.total.dihedrals.dat 3131 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/f_struct.IntraMolec_NB_Pair.total.intra_1-4.dat 4061 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/f_struct.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/f_struct.Pair_Interaction.total.pairs.dat 341 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/f_struct_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 434 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/f_struct_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/f_struct_coeff.Pair_Interaction.total.pairs.dat 0 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/force_files/ 1085 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/force_files/f_forces.Angle.total.angles.dat 1116 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/force_files/f_forces.BondStretch.total.bonds.dat 22351 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/force_files/f_forces.Dihedral.total.dihedrals.dat 4681 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/force_files/f_forces.IntraMolec_NB_Pair.total.intra_1-4.dat 6851 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/force_files/f_forces.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/force_files/f_forces.Pair_Interaction.total.pairs.dat 33 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/force_files/f_forces_coeff.Dihedral.total.dihedrals.dat 496 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/force_files/f_forces_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 713 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/force_files/f_forces_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/force_files/f_forces_coeff.Pair_Interaction.total.pairs.dat 527 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/force_files/force_imin1.angles.dat 399 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/force_files/force_imin1.bonds.dat 60 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/force_files/force_imin1.dihedrals.dat 147 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/force_files/force_imin1.intra_1-4.dat 198 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/force_files/force_imin1.intra_1-5.dat 175 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/force_files/force_imin1.pairs.dat 1383 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/force_files/make_force_file.py 514 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/force_i.angles.dat 616 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/force_i.bonds.dat 71 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/force_i.dihedrals.dat 208 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/force_i.intra_1-4.dat 259 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/force_i.intra_1-5.dat 361 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/force_i.pairs.dat 254 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/force_i_scale.angles.dat 382 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/force_i_scale.bonds.dat 35 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/force_i_scale.dihedrals.dat 123 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/force_i_scale.intra_1-4.dat 155 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/force_i_scale.intra_1-5.dat 204 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/force_i_scale.pairs.dat 527 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/force_imin1.angles.dat 399 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/force_imin1.bonds.dat 60 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/force_imin1.dihedrals.dat 147 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/force_imin1.intra_1-4.dat 198 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/force_imin1.intra_1-5.dat 175 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/force_imin1.pairs.dat 514 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/force_imin1_check.angles.dat 616 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/force_imin1_check.bonds.dat 71 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/force_imin1_check.dihedrals.dat 208 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/force_imin1_check.intra_1-4.dat 259 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/force_imin1_check.intra_1-5.dat 361 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/force_imin1_check.pairs.dat 107 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/inp.txt 31673 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/log.txt 2993 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/out.total.txt 1866 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/par.txt 2068 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/qsub_cgff_iter.sh 25 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/save.FF.dat 6577 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/save.L.dat 1126970 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/save.M.dat 1120925 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/save.M2.dat 1149155 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/save.M_cnt.dat 8 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/save.Nf.dat 6665 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/save.b_forces.dat 6781 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/save.b_struct.dat 1120933 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/save.d2M.dat 7038 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/save.d2b.dat 6622 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/save.g.dat 6533 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/save.g_cnt.dat 6532 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/save.rescale.dat 6553 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter1/summarize_input.txt 6073 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/iter_dodecapeptide_lambda_BIbond-angleref_CGdihref.sh 275 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_BIbond-angle_noFMangle/qsub.sh 0 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/ 0 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/ 1085 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/L.Angle.total.angles.dat 1116 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/L.BondStretch.total.bonds.dat 4681 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/L.IntraMolec_NB_Pair.total.intra_1-4.dat 6851 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/L.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/L.Pair_Interaction.total.pairs.dat 496 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/L_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 713 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/L_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/L_coeff.Pair_Interaction.total.pairs.dat 3769 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/Protein_A.itp 2793 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/S.dat 0 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/S_CONST.dat 1085 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/b_forces.Angle.total.angles.dat 1116 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/b_forces.BondStretch.total.bonds.dat 4681 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/b_forces.IntraMolec_NB_Pair.total.intra_1-4.dat 6851 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/b_forces.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/b_forces.Pair_Interaction.total.pairs.dat 496 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/b_forces_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 713 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/b_forces_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/b_forces_coeff.Pair_Interaction.total.pairs.dat 1085 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/b_struct.Angle.total.angles.dat 1116 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/b_struct.BondStretch.total.bonds.dat 4681 11-09-2014 16:51 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ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Emin/qsub_xj.sh 2102 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Emin/run_gmx.sh 145686 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Emin/table.xvg 14981 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Emin/table_a0.xvg 66469 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Emin/table_b0.xvg 29958 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Emin/table_d0.xvg 149901 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Emin/tablep.xvg 0 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Equil/ 4250 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Equil/Protein_A.itp 5200 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Equil/cgpolyALA_opls.Equil.tpr 897 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Equil/cgpolyALA_opls.confout.gro 103 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Equil/mart_polyALA_Equil_POSRES.o3107616 4671 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Equil/mart_trp_zip.Equil.mdp 995 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Equil/mart_trp_zip.top 10325 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Equil/mdout-cgpolyALA_opls.mdp 232 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Equil/qsub.sh 238 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Equil/qsub_xj.sh 2131 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Equil/run_gmx.sh 5352 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Equil/state.cpt 145686 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Equil/table.xvg 14981 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Equil/table_a0.xvg 66469 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Equil/table_b0.xvg 29958 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Equil/table_d0.xvg 149901 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Equil/tablep.xvg 0 11-09-2014 16:51 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ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/Tick_Marks_Rg_Q_scatter.m 1337 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/Tick_Marks_Rg_rmsd_scatter.m 1493 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/angles.xvg 1782 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/bonds.xvg 9500 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/bonds_1-4.xvg 5811 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/bonds_1-4_all.xvg 6502 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/bonds_1-5_all.xvg 9555 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/bonds_2-5.xvg 9350 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/bonds_3-6.xvg 9040 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/bonds_4-7.xvg 9347 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/bonds_5-8.xvg 9268 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/bonds_6-9.xvg 9666 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/bonds_7-10.xvg 9559 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/bonds_8-11.xvg 9598 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/bonds_9-12.xvg 1639 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/calc_dist.sh 2106 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/calc_dist_all1-4bonds.sh 0 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/cgff/ 899 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/cgff/L.Angle.total.angles.dat 1085 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/cgff/L.BondStretch.total.bonds.dat 3131 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/cgff/L.IntraMolec_NB_Pair.total.intra_1-4.dat 4061 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/cgff/L.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/cgff/L.Pair_Interaction.total.pairs.dat 341 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/cgff/L_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 434 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/cgff/L_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/cgff/L_coeff.Pair_Interaction.total.pairs.dat 3769 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/cgff/Protein_A.itp 2352 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/cgff/S.dat 899 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/cgff/b_forces.Angle.total.angles.dat 1085 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/cgff/b_forces.BondStretch.total.bonds.dat 3131 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/cgff/b_forces.IntraMolec_NB_Pair.total.intra_1-4.dat 4061 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/cgff/b_forces.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/cgff/b_forces.Pair_Interaction.total.pairs.dat 341 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/cgff/b_forces_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 434 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/cgff/b_forces_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/cgff/b_forces_coeff.Pair_Interaction.total.pairs.dat 899 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/cgff/b_struct.Angle.total.angles.dat 1085 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/cgff/b_struct.BondStretch.total.bonds.dat 3131 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/cgff/b_struct.IntraMolec_NB_Pair.total.intra_1-4.dat 4061 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/cgff/b_struct.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/cgff/b_struct.Pair_Interaction.total.pairs.dat 341 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/cgff/b_struct_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 434 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/cgff/b_struct_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/cgff/b_struct_coeff.Pair_Interaction.total.pairs.dat 97148 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/cgff/cgff-polyALA-FM_noH2O.o3846357 651 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/cgff/cgpolyALA_opls.gro 2091 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/cgff/cgpolyALA_opls.mdp 445 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/cgff/cgpolyALA_opls.top 4164 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/cgff/cgpolyALA_opls.tpr 899 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/cgff/f_forces.Angle.total.angles.dat 1085 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/cgff/f_forces.BondStretch.total.bonds.dat 22351 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/cgff/f_forces.Dihedral.total.dihedrals.dat 3131 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/cgff/f_forces.IntraMolec_NB_Pair.total.intra_1-4.dat 4061 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/cgff/f_forces.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/cgff/f_forces.Pair_Interaction.total.pairs.dat 341 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/cgff/f_forces_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 434 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/cgff/f_forces_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/cgff/f_forces_coeff.Pair_Interaction.total.pairs.dat 899 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/cgff/f_struct.Angle.total.angles.dat 1085 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/cgff/f_struct.BondStretch.total.bonds.dat 22351 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/cgff/f_struct.Dihedral.total.dihedrals.dat 3131 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/cgff/f_struct.IntraMolec_NB_Pair.total.intra_1-4.dat 4061 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/cgff/f_struct.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/cgff/f_struct.Pair_Interaction.total.pairs.dat 341 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/cgff/f_struct_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 434 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/cgff/f_struct_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/cgff/f_struct_coeff.Pair_Interaction.total.pairs.dat 899 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/cgff/g.Angle.total.angles.dat 1085 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/cgff/g.BondStretch.total.bonds.dat 3131 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/cgff/g.IntraMolec_NB_Pair.total.intra_1-4.dat 4061 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/cgff/g.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/cgff/g.Pair_Interaction.total.pairs.dat 899 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/cgff/g_cnt.Angle.total.angles.dat 1085 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/cgff/g_cnt.BondStretch.total.bonds.dat 3131 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/cgff/g_cnt.IntraMolec_NB_Pair.total.intra_1-4.dat 4061 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/cgff/g_cnt.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/cgff/g_cnt.Pair_Interaction.total.pairs.dat 341 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/cgff/g_cnt_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 434 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/cgff/g_cnt_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/cgff/g_cnt_coeff.Pair_Interaction.total.pairs.dat 341 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/cgff/g_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 434 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/cgff/g_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/cgff/g_coeff.Pair_Interaction.total.pairs.dat 82 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/cgff/inp.txt 31393 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/cgff/log.txt 4826 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/cgff/out.total.txt 1699 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/cgff/par.txt 2068 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/cgff/qsub.sh 24 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/cgff/save.FF.dat 6562 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/cgff/save.L.dat 1126970 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/cgff/save.M.dat 1120925 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/cgff/save.M2.dat 1149155 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/cgff/save.M_cnt.dat 8 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/cgff/save.Nf.dat 6641 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/cgff/save.b_forces.dat 6807 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/cgff/save.b_struct.dat 1120933 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/cgff/save.d2M.dat 6861 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/cgff/save.d2b.dat 6596 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/cgff/save.g.dat 6533 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/cgff/save.g_cnt.dat 6533 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/cgff/save.rescale.dat 5960 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/cgff/summarize_input.txt 897 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/cgpolyALA_opls.confout.gro 585 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/cgpolyALA_opls.gro 5200 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/cgpolyALA_opls.tpr 2851 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/dihedrals.xvg 10890457 11-09-2014 16:51 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ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/table_a0.xvg 66469 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/table_b0.xvg 29958 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/table_d0.xvg 149901 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/Prod_run/tablep.xvg 0 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/rerun_BIbond-angleref_CGdihref/ 3531 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/rerun_BIbond-angleref_CGdihref/Protein_A.itp 585 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/rerun_BIbond-angleref_CGdihref/cgpolyALA_opls.gro 4666 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/rerun_BIbond-angleref_CGdihref/cgpolyALA_opls.mdp 995 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/rerun_BIbond-angleref_CGdihref/cgpolyALA_opls.top 4788 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/rerun_BIbond-angleref_CGdihref/cgpolyALA_opls.tpr 7495 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/rerun_BIbond-angleref_CGdihref/table_a0.xvg 24856 11-09-2014 16:51 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ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/rerun_CGdihref/cgpolyALA_opls.mdp 995 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/rerun_CGdihref/cgpolyALA_opls.top 4616 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/rerun_CGdihref/cgpolyALA_opls.tpr 10306 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/rerun_CGdihref/mdout.mdp 29822 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/cgsim/rerun_CGdihref/table_d0.xvg 0 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/edit/ 722 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/edit/combine_dih.py 737 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/edit/combine_tables.py 4681 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/edit/f_1-4.dat 6851 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/edit/f_1-5.dat 1085 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/edit/f_angle.dat 1116 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/edit/f_bond.dat 14252 11-09-2014 16:51 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ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/edit/f_forces.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/edit/f_forces.Pair_Interaction.total.pairs.dat 5921 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/edit/f_pairs.dat 799 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/edit/run.make_gmx4_table.sh 145686 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/edit/table.xvg 14981 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/edit/table_a0.xvg 66469 11-09-2014 16:51 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ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/f_forces.Angle.total.angles.dat 1116 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/f_forces.BondStretch.total.bonds.dat 22351 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/f_forces.Dihedral.total.dihedrals.dat 4681 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/f_forces.IntraMolec_NB_Pair.total.intra_1-4.dat 6851 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/f_forces.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/f_forces.Pair_Interaction.total.pairs.dat 496 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/f_forces_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 713 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/f_forces_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/f_forces_coeff.Pair_Interaction.total.pairs.dat 1085 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/f_struct.Angle.total.angles.dat 1116 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/f_struct.BondStretch.total.bonds.dat 22351 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/f_struct.Dihedral.total.dihedrals.dat 4681 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/f_struct.IntraMolec_NB_Pair.total.intra_1-4.dat 6851 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/f_struct.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/f_struct.Pair_Interaction.total.pairs.dat 496 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/f_struct_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 713 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/f_struct_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/f_struct_coeff.Pair_Interaction.total.pairs.dat 1085 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/g.Angle.total.angles.dat 1116 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/g.BondStretch.total.bonds.dat 4681 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/g.IntraMolec_NB_Pair.total.intra_1-4.dat 6851 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/g.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/g.Pair_Interaction.total.pairs.dat 1085 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/g_cnt.Angle.total.angles.dat 1116 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/g_cnt.BondStretch.total.bonds.dat 4681 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/g_cnt.IntraMolec_NB_Pair.total.intra_1-4.dat 6851 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/g_cnt.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/g_cnt.Pair_Interaction.total.pairs.dat 496 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/g_cnt_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 713 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/g_cnt_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/g_cnt_coeff.Pair_Interaction.total.pairs.dat 496 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/g_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 713 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/g_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/g_coeff.Pair_Interaction.total.pairs.dat 102 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/inp.txt 31970 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/log.txt 4822 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/out.total.txt 1686 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/par.txt 1701 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/qsub.sh 25 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/save.FF.dat 6577 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/save.L.dat 1129752 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/save.M.dat 1120925 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/save.M2.dat 1151908 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/save.M_cnt.dat 8 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/save.Nf.dat 6665 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/save.b_forces.dat 6781 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/save.b_struct.dat 1120933 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/save.d2M.dat 7038 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/save.d2b.dat 6622 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/save.g.dat 6532 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/save.g_cnt.dat 6532 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/save.rescale.dat 6468 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter0/summarize_input.txt 0 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/ 1120925 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/M2.dat 3769 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/Protein_A.itp 2037 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/S.dat 2037 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/S_CONST.dat 408 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/bAA.angles.dat 493 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/bAA.bonds.dat 51 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/bAA.dihedrals.dat 170 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/bAA.intra_1-4.dat 187 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/bAA.intra_1-5.dat 340 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/bAA.pairs.dat 408 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/b_soln_err.angles.dat 493 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/b_soln_err.bonds.dat 51 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/b_soln_err.dihedrals.dat 170 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/b_soln_err.intra_1-4.dat 187 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/b_soln_err.intra_1-5.dat 340 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/b_soln_err.pairs.dat 2001 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgff-polyALA-FM_noH2O.o3849349 651 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgpolyALA_opls.gro 2091 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgpolyALA_opls.mdp 445 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgpolyALA_opls.top 4164 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgpolyALA_opls.tpr 0 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/ 0 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Emin/ 338 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Emin/Emin_Commands.txt 4250 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Emin/Protein_A.itp 609 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Emin/cgpolyALA_opls.Emin.gro 585 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Emin/cgpolyALA_opls.gro 5200 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Emin/cgpolyALA_opls.tpr 39 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Emin/mart_polyALA_Equil_POSRES.o3849360 4667 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Emin/mart_trp_zip.Emin.mdp 995 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Emin/mart_trp_zip.top 10323 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Emin/mdout-cgpolyALA_opls.mdp 239 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Emin/qsub_cgsim_Emin.sh 2100 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Emin/run_gmx.sh 145854 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Emin/table.xvg 14981 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Emin/table_a0.xvg 66469 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Emin/table_b0.xvg 29958 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Emin/table_d0.xvg 151042 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Emin/tablep.xvg 0 11-09-2014 16:51 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ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Equil/mart_trp_zip.top 10325 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Equil/mdout-cgpolyALA_opls.mdp 239 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Equil/qsub_cgsim_Equil.sh 2129 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Equil/run_gmx.sh 5364 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Equil/state.cpt 145854 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Equil/table.xvg 14981 11-09-2014 16:51 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ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Prod_run/Rg.xvg 1307 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Prod_run/Tick_Marks_Rg_Q_scatter.m 1337 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Prod_run/Tick_Marks_Rg_rmsd_scatter.m 1748 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Prod_run/angles.xvg 11248 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Prod_run/bonds.xvg 10145 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Prod_run/bonds_1-4.xvg 6289 11-09-2014 16:51 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ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Prod_run/bonds_6-9.xvg 8533 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Prod_run/bonds_7-10.xvg 8966 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Prod_run/bonds_8-11.xvg 9269 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Prod_run/bonds_9-12.xvg 1816 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Prod_run/calc_dist.sh 2106 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Prod_run/calc_dist_all1-4bonds.sh 1653 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Prod_run/calc_dist_old.sh 0 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Prod_run/cgff/ 868 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Prod_run/cgff/L.Angle.total.angles.dat 1085 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Prod_run/cgff/L.BondStretch.total.bonds.dat 3751 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Prod_run/cgff/L.IntraMolec_NB_Pair.total.intra_1-4.dat 4371 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Prod_run/cgff/L.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Prod_run/cgff/L.Pair_Interaction.total.pairs.dat 403 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Prod_run/cgff/L_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 465 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Prod_run/cgff/L_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Prod_run/cgff/L_coeff.Pair_Interaction.total.pairs.dat 3769 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Prod_run/cgff/Protein_A.itp 2394 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Prod_run/cgff/S.dat 2394 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Prod_run/cgff/S_CONST.dat 868 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Prod_run/cgff/b_forces.Angle.total.angles.dat 1085 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Prod_run/cgff/b_forces.BondStretch.total.bonds.dat 3751 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Prod_run/cgff/b_forces.IntraMolec_NB_Pair.total.intra_1-4.dat 4371 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Prod_run/cgff/b_forces.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Prod_run/cgff/b_forces.Pair_Interaction.total.pairs.dat 403 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Prod_run/cgff/b_forces_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 465 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Prod_run/cgff/b_forces_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Prod_run/cgff/b_forces_coeff.Pair_Interaction.total.pairs.dat 868 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Prod_run/cgff/b_struct.Angle.total.angles.dat 1085 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Prod_run/cgff/b_struct.BondStretch.total.bonds.dat 3751 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Prod_run/cgff/b_struct.IntraMolec_NB_Pair.total.intra_1-4.dat 4371 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Prod_run/cgff/b_struct.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Prod_run/cgff/b_struct.Pair_Interaction.total.pairs.dat 403 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Prod_run/cgff/b_struct_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 465 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Prod_run/cgff/b_struct_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Prod_run/cgff/b_struct_coeff.Pair_Interaction.total.pairs.dat 169164 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Prod_run/cgff/cgff-polyALA-FM_noH2O.o3849780 651 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Prod_run/cgff/cgpolyALA_opls.gro 2091 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Prod_run/cgff/cgpolyALA_opls.mdp 445 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Prod_run/cgff/cgpolyALA_opls.top 4164 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Prod_run/cgff/cgpolyALA_opls.tpr 868 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Prod_run/cgff/f_forces.Angle.total.angles.dat 1085 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Prod_run/cgff/f_forces.BondStretch.total.bonds.dat 22351 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Prod_run/cgff/f_forces.Dihedral.total.dihedrals.dat 3751 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Prod_run/cgff/f_forces.IntraMolec_NB_Pair.total.intra_1-4.dat 4371 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Prod_run/cgff/f_forces.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Prod_run/cgff/f_forces.Pair_Interaction.total.pairs.dat 403 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Prod_run/cgff/f_forces_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 465 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Prod_run/cgff/f_forces_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Prod_run/cgff/f_forces_coeff.Pair_Interaction.total.pairs.dat 868 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Prod_run/cgff/f_struct.Angle.total.angles.dat 1085 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Prod_run/cgff/f_struct.BondStretch.total.bonds.dat 22351 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Prod_run/cgff/f_struct.Dihedral.total.dihedrals.dat 3751 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Prod_run/cgff/f_struct.IntraMolec_NB_Pair.total.intra_1-4.dat 4371 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Prod_run/cgff/f_struct.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Prod_run/cgff/f_struct.Pair_Interaction.total.pairs.dat 403 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Prod_run/cgff/f_struct_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 465 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Prod_run/cgff/f_struct_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Prod_run/cgff/f_struct_coeff.Pair_Interaction.total.pairs.dat 868 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Prod_run/cgff/g.Angle.total.angles.dat 1085 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Prod_run/cgff/g.BondStretch.total.bonds.dat 3751 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Prod_run/cgff/g.IntraMolec_NB_Pair.total.intra_1-4.dat 4371 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Prod_run/cgff/g.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Prod_run/cgff/g.Pair_Interaction.total.pairs.dat 868 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Prod_run/cgff/g_cnt.Angle.total.angles.dat 1085 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Prod_run/cgff/g_cnt.BondStretch.total.bonds.dat 3751 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Prod_run/cgff/g_cnt.IntraMolec_NB_Pair.total.intra_1-4.dat 4371 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Prod_run/cgff/g_cnt.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Prod_run/cgff/g_cnt.Pair_Interaction.total.pairs.dat 403 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Prod_run/cgff/g_cnt_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 465 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Prod_run/cgff/g_cnt_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Prod_run/cgff/g_cnt_coeff.Pair_Interaction.total.pairs.dat 403 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Prod_run/cgff/g_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 465 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Prod_run/cgff/g_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Prod_run/cgff/g_coeff.Pair_Interaction.total.pairs.dat 80 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Prod_run/cgff/inp.txt 31778 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/cgsim/Prod_run/cgff/log.txt 4826 11-09-2014 16:51 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ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/edit/table_a0.xvg 14981 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/edit/table_a0_old.xvg 66469 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/edit/table_b0.xvg 66469 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/edit/table_b0_old.xvg 29958 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/edit/table_d0.xvg 29958 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/edit/table_d0_old.xvg 29961 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/edit/table_d0_ref.xvg 145686 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/edit/table_old.xvg 151042 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/edit/tablep.xvg 146845 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/edit/tablep_1-4.xvg 146845 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/edit/tablep_1-4_old.xvg 146791 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/edit/tablep_1-5.xvg 145650 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/edit/tablep_1-5_old.xvg 744 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/f_forces.Angle.total.angles.dat 899 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/f_forces.BondStretch.total.bonds.dat 22351 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/f_forces.Dihedral.total.dihedrals.dat 2821 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/f_forces.IntraMolec_NB_Pair.total.intra_1-4.dat 3131 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/f_forces.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/f_forces.Pair_Interaction.total.pairs.dat 310 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/f_forces_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 341 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/f_forces_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/f_forces_coeff.Pair_Interaction.total.pairs.dat 744 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/f_struct.Angle.total.angles.dat 899 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/f_struct.BondStretch.total.bonds.dat 22351 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/f_struct.Dihedral.total.dihedrals.dat 2821 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/f_struct.IntraMolec_NB_Pair.total.intra_1-4.dat 3131 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/f_struct.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/f_struct.Pair_Interaction.total.pairs.dat 310 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/f_struct_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 341 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/f_struct_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/f_struct_coeff.Pair_Interaction.total.pairs.dat 0 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/force_files/ 1085 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/force_files/f_forces.Angle.total.angles.dat 1116 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/force_files/f_forces.BondStretch.total.bonds.dat 22351 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/force_files/f_forces.Dihedral.total.dihedrals.dat 4681 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/force_files/f_forces.IntraMolec_NB_Pair.total.intra_1-4.dat 6851 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/force_files/f_forces.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/force_files/f_forces.Pair_Interaction.total.pairs.dat 33 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/force_files/f_forces_coeff.Dihedral.total.dihedrals.dat 496 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/force_files/f_forces_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 713 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/force_files/f_forces_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/force_files/f_forces_coeff.Pair_Interaction.total.pairs.dat 527 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/force_files/force_imin1.angles.dat 399 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/force_files/force_imin1.bonds.dat 60 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/force_files/force_imin1.dihedrals.dat 147 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/force_files/force_imin1.intra_1-4.dat 198 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/force_files/force_imin1.intra_1-5.dat 175 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/force_files/force_imin1.pairs.dat 1383 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/force_files/make_force_file.py 429 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/force_i.angles.dat 514 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/force_i.bonds.dat 71 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/force_i.dihedrals.dat 191 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/force_i.intra_1-4.dat 208 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/force_i.intra_1-5.dat 361 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/force_i.pairs.dat 214 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/force_i_scale.angles.dat 315 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/force_i_scale.bonds.dat 42 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/force_i_scale.dihedrals.dat 110 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/force_i_scale.intra_1-4.dat 124 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/force_i_scale.intra_1-5.dat 206 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/force_i_scale.pairs.dat 527 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/force_imin1.angles.dat 399 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/force_imin1.bonds.dat 60 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/force_imin1.dihedrals.dat 147 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/force_imin1.intra_1-4.dat 198 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/force_imin1.intra_1-5.dat 175 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/force_imin1.pairs.dat 429 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/force_imin1_check.angles.dat 514 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/force_imin1_check.bonds.dat 71 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/force_imin1_check.dihedrals.dat 191 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/force_imin1_check.intra_1-4.dat 208 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/force_imin1_check.intra_1-5.dat 361 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/force_imin1_check.pairs.dat 107 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/inp.txt 31341 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/log.txt 2993 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/out.total.txt 1865 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/par.txt 2069 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/qsub_cgff_iter.sh 25 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/save.FF.dat 6577 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/save.L.dat 1126970 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/save.M.dat 1120925 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/save.M2.dat 1149155 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/save.M_cnt.dat 8 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/save.Nf.dat 6665 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/save.b_forces.dat 6781 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/save.b_struct.dat 1120933 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/save.d2M.dat 7038 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/save.d2b.dat 6622 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/save.g.dat 6533 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter1/save.g_cnt.dat 6532 11-09-2014 16:51 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51 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter10/bAA.dihedrals.dat 187 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter10/bAA.intra_1-4.dat 170 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter10/bAA.intra_1-5.dat 340 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter10/bAA.pairs.dat 459 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter10/b_soln_err.angles.dat 476 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter10/b_soln_err.bonds.dat 51 11-09-2014 16:51 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ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter10/cgsim/Prod_run/table_b0.xvg 0 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter10/cgsim/Prod_run/table_d0.xvg 0 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter10/cgsim/Prod_run/tablep.xvg 0 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter10/edit/ 512 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter10/edit/calc_avgerr.py 1456 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter10/edit/calc_lambda_1-4.py 1456 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter10/edit/calc_lambda_1-5.py 1450 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter10/edit/calc_lambda_angle.py 1448 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter10/edit/calc_lambda_bond.py 1456 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter10/edit/calc_lambda_dih.py 1448 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter10/edit/calc_lambda_pairs.py 722 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter10/edit/combine_dih.py 737 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter10/edit/combine_tables.py 24 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter10/edit/error.txt 183 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter10/edit/f_1-4_lambda.dat 183 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter10/edit/f_1-5_lambda.dat 189 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter10/edit/f_angle_lambda.dat 186 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter10/edit/f_bond_lambda.dat 234 11-09-2014 16:51 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ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter10/save.g.dat 6532 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter10/save.rescale.dat 6553 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter10/summarize_input.txt 0 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/ 1120925 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/M2.dat 3769 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/Protein_A.itp 2037 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/S.dat 2037 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/S_CONST.dat 408 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/bAA.angles.dat 493 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/bAA.bonds.dat 51 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/bAA.dihedrals.dat 170 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/bAA.intra_1-4.dat 187 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/bAA.intra_1-5.dat 340 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/bAA.pairs.dat 408 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/b_soln_err.angles.dat 493 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/b_soln_err.bonds.dat 51 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/b_soln_err.dihedrals.dat 170 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/b_soln_err.intra_1-4.dat 187 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/b_soln_err.intra_1-5.dat 340 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/b_soln_err.pairs.dat 1982 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgff-polyALA-FM_noH2O.o3849800 651 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgpolyALA_opls.gro 2091 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgpolyALA_opls.mdp 445 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgpolyALA_opls.top 4164 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgpolyALA_opls.tpr 0 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/ 0 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Emin/ 338 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Emin/Emin_Commands.txt 4250 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Emin/Protein_A.itp 609 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Emin/cgpolyALA_opls.Emin.gro 585 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Emin/cgpolyALA_opls.gro 5200 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Emin/cgpolyALA_opls.tpr 39 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Emin/mart_polyALA_Equil_POSRES.o3849802 4667 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Emin/mart_trp_zip.Emin.mdp 995 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Emin/mart_trp_zip.top 10323 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Emin/mdout-cgpolyALA_opls.mdp 239 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Emin/qsub_cgsim_Emin.sh 2100 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Emin/run_gmx.sh 145916 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Emin/table.xvg 14979 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Emin/table_a0.xvg 66469 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Emin/table_b0.xvg 29959 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Emin/table_d0.xvg 151041 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Emin/tablep.xvg 0 11-09-2014 16:51 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ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Equil/mart_trp_zip.top 10325 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Equil/mdout-cgpolyALA_opls.mdp 239 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Equil/qsub_cgsim_Equil.sh 2129 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Equil/run_gmx.sh 5364 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Equil/state.cpt 5364 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Equil/state_prev.cpt 145916 11-09-2014 16:51 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ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/Protein_A.itp 59000656 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/Rg.xvg 1307 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/Tick_Marks_Rg_Q_scatter.m 1337 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/Tick_Marks_Rg_rmsd_scatter.m 1840 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/angles.xvg 12084 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/bonds.xvg 8279 11-09-2014 16:51 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ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/bonds_5-8.xvg 6491 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/bonds_6-9.xvg 6326 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/bonds_7-10.xvg 6293 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/bonds_8-11.xvg 7722 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/bonds_9-12.xvg 1816 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/calc_dist.sh 2106 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/calc_dist_all1-4bonds.sh 1653 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/calc_dist_old.sh 0 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/cgff/ 899 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/cgff/L.Angle.total.angles.dat 1054 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/cgff/L.BondStretch.total.bonds.dat 3131 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/cgff/L.IntraMolec_NB_Pair.total.intra_1-4.dat 3131 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/cgff/L.IntraMolec_NB_Pair.total.intra_1-5.dat 6231 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/cgff/L.Pair_Interaction.total.pairs.dat 341 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/cgff/L_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 341 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/cgff/L_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 651 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/cgff/L_coeff.Pair_Interaction.total.pairs.dat 3769 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/cgff/Protein_A.itp 2289 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/cgff/S.dat 2289 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/cgff/S_CONST.dat 899 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/cgff/b_forces.Angle.total.angles.dat 1054 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/cgff/b_forces.BondStretch.total.bonds.dat 3131 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/cgff/b_forces.IntraMolec_NB_Pair.total.intra_1-4.dat 3131 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/cgff/b_forces.IntraMolec_NB_Pair.total.intra_1-5.dat 6231 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/cgff/b_forces.Pair_Interaction.total.pairs.dat 341 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/cgff/b_forces_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 341 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/cgff/b_forces_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 651 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/cgff/b_forces_coeff.Pair_Interaction.total.pairs.dat 899 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/cgff/b_struct.Angle.total.angles.dat 1054 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/cgff/b_struct.BondStretch.total.bonds.dat 3131 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/cgff/b_struct.IntraMolec_NB_Pair.total.intra_1-4.dat 3131 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/cgff/b_struct.IntraMolec_NB_Pair.total.intra_1-5.dat 6231 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/cgff/b_struct.Pair_Interaction.total.pairs.dat 341 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/cgff/b_struct_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 341 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/cgff/b_struct_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 651 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/cgff/b_struct_coeff.Pair_Interaction.total.pairs.dat 169164 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/cgff/cgff-polyALA-FM_noH2O.o3850058 651 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/cgff/cgpolyALA_opls.gro 2091 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/cgff/cgpolyALA_opls.mdp 445 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/cgff/cgpolyALA_opls.top 4164 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/cgff/cgpolyALA_opls.tpr 899 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/cgff/f_forces.Angle.total.angles.dat 1054 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/cgff/f_forces.BondStretch.total.bonds.dat 22351 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/cgff/f_forces.Dihedral.total.dihedrals.dat 3131 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/cgff/f_forces.IntraMolec_NB_Pair.total.intra_1-4.dat 3131 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/cgff/f_forces.IntraMolec_NB_Pair.total.intra_1-5.dat 6231 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/cgff/f_forces.Pair_Interaction.total.pairs.dat 341 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/cgff/f_forces_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 341 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/cgff/f_forces_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 651 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/cgff/f_forces_coeff.Pair_Interaction.total.pairs.dat 899 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/cgff/f_struct.Angle.total.angles.dat 1054 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/cgff/f_struct.BondStretch.total.bonds.dat 22351 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/cgff/f_struct.Dihedral.total.dihedrals.dat 3131 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/cgff/f_struct.IntraMolec_NB_Pair.total.intra_1-4.dat 3131 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/cgff/f_struct.IntraMolec_NB_Pair.total.intra_1-5.dat 6231 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/cgff/f_struct.Pair_Interaction.total.pairs.dat 341 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/cgff/f_struct_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 341 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/cgff/f_struct_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 651 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/cgff/f_struct_coeff.Pair_Interaction.total.pairs.dat 899 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/cgff/g.Angle.total.angles.dat 1054 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/cgff/g.BondStretch.total.bonds.dat 3131 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/cgff/g.IntraMolec_NB_Pair.total.intra_1-4.dat 3131 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/cgff/g.IntraMolec_NB_Pair.total.intra_1-5.dat 6231 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/cgff/g.Pair_Interaction.total.pairs.dat 899 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/cgff/g_cnt.Angle.total.angles.dat 1054 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/cgff/g_cnt.BondStretch.total.bonds.dat 3131 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/cgff/g_cnt.IntraMolec_NB_Pair.total.intra_1-4.dat 3131 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/cgff/g_cnt.IntraMolec_NB_Pair.total.intra_1-5.dat 6231 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/cgff/g_cnt.Pair_Interaction.total.pairs.dat 341 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/cgff/g_cnt_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 341 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/cgff/g_cnt_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 651 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/cgff/g_cnt_coeff.Pair_Interaction.total.pairs.dat 341 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/cgff/g_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 341 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/cgff/g_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 651 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/cgff/g_coeff.Pair_Interaction.total.pairs.dat 80 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/cgff/inp.txt 31668 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/cgff/log.txt 4827 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/cgff/out.total.txt 1816 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/cgff/par.txt 2069 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/cgff/qsub_cgff.sh 24 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/cgff/save.FF.dat 6558 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/cgff/save.L.dat 1126363 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/cgff/save.M.dat 1120925 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/cgff/save.M2.dat 1149038 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/cgff/save.M_cnt.dat 9 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/cgff/save.Nf.dat 6629 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/cgff/save.b_forces.dat 6805 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/cgff/save.b_struct.dat 1120933 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/cgff/save.d2M.dat 6877 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/cgff/save.d2b.dat 6597 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/cgff/save.g.dat 6534 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/cgff/save.g_cnt.dat 6534 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/cgff/save.rescale.dat 6174 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/cgff/summarize_input.txt 897 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/cgpolyALA_opls.confout.gro 585 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/cgpolyALA_opls.gro 5200 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/cgpolyALA_opls.tpr 1541 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/dihedrals.xvg 19890021 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/cgsim/Prod_run/distance.xvg 19890483 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ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/f_forces.Angle.total.angles.dat 899 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/f_forces.BondStretch.total.bonds.dat 22351 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/f_forces.Dihedral.total.dihedrals.dat 2821 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/f_forces.IntraMolec_NB_Pair.total.intra_1-4.dat 3131 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/f_forces.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/f_forces.Pair_Interaction.total.pairs.dat 310 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/f_forces_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 341 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/f_forces_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/f_forces_coeff.Pair_Interaction.total.pairs.dat 744 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/f_struct.Angle.total.angles.dat 899 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/f_struct.BondStretch.total.bonds.dat 22351 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/f_struct.Dihedral.total.dihedrals.dat 2821 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/f_struct.IntraMolec_NB_Pair.total.intra_1-4.dat 3131 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/f_struct.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/f_struct.Pair_Interaction.total.pairs.dat 310 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/f_struct_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 341 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/f_struct_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/f_struct_coeff.Pair_Interaction.total.pairs.dat 0 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/force_files/ 1085 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/force_files/f_forces.Angle.total.angles.dat 1116 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/force_files/f_forces.BondStretch.total.bonds.dat 22351 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/force_files/f_forces.Dihedral.total.dihedrals.dat 4681 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/force_files/f_forces.IntraMolec_NB_Pair.total.intra_1-4.dat 6851 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/force_files/f_forces.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/force_files/f_forces.Pair_Interaction.total.pairs.dat 33 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/force_files/f_forces_coeff.Dihedral.total.dihedrals.dat 496 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/force_files/f_forces_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 713 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/force_files/f_forces_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/force_files/f_forces_coeff.Pair_Interaction.total.pairs.dat 527 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/force_files/force_imin1.angles.dat 399 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/force_files/force_imin1.bonds.dat 60 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/force_files/force_imin1.dihedrals.dat 147 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/force_files/force_imin1.intra_1-4.dat 198 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/force_files/force_imin1.intra_1-5.dat 175 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/force_files/force_imin1.pairs.dat 1383 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/force_files/make_force_file.py 429 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/force_i.angles.dat 514 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/force_i.bonds.dat 71 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/force_i.dihedrals.dat 191 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/force_i.intra_1-4.dat 208 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/force_i.intra_1-5.dat 361 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/force_i.pairs.dat 214 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/force_i_scale.angles.dat 315 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/force_i_scale.bonds.dat 35 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/force_i_scale.dihedrals.dat 110 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/force_i_scale.intra_1-4.dat 123 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/force_i_scale.intra_1-5.dat 204 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/force_i_scale.pairs.dat 214 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/force_imin1.angles.dat 315 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/force_imin1.bonds.dat 42 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/force_imin1.dihedrals.dat 110 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/force_imin1.intra_1-4.dat 124 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/force_imin1.intra_1-5.dat 206 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/force_imin1.pairs.dat 429 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/force_imin1_check.angles.dat 514 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/force_imin1_check.bonds.dat 71 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/force_imin1_check.dihedrals.dat 191 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/force_imin1_check.intra_1-4.dat 208 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/force_imin1_check.intra_1-5.dat 361 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/force_imin1_check.pairs.dat 107 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/inp.txt 31341 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/log.txt 2992 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/out.total.txt 1865 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/par.txt 2069 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/qsub_cgff_iter.sh 25 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/save.FF.dat 6577 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/save.L.dat 1126639 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/save.M.dat 1120925 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/save.M2.dat 1151399 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/save.M_cnt.dat 8 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/save.Nf.dat 6665 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/save.b_forces.dat 6781 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/save.b_struct.dat 1120933 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/save.d2M.dat 7038 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/save.d2b.dat 6622 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/save.g.dat 6534 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/save.g_cnt.dat 6532 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/save.rescale.dat 6553 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter2/summarize_input.txt 0 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/ 1120925 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/M2.dat 3769 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/Protein_A.itp 2016 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/S.dat 2016 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/S_CONST.dat 425 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/bAA.angles.dat 493 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/bAA.bonds.dat 51 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/bAA.dihedrals.dat 170 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/bAA.intra_1-4.dat 153 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/bAA.intra_1-5.dat 340 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/bAA.pairs.dat 425 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/b_soln_err.angles.dat 493 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/b_soln_err.bonds.dat 51 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/b_soln_err.dihedrals.dat 170 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/b_soln_err.intra_1-4.dat 153 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/b_soln_err.intra_1-5.dat 340 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/b_soln_err.pairs.dat 1979 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgff-polyALA-FM_noH2O.o3850082 651 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgpolyALA_opls.gro 2091 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgpolyALA_opls.mdp 445 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgpolyALA_opls.top 4164 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgpolyALA_opls.tpr 0 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/ 0 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Emin/ 338 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Emin/Emin_Commands.txt 4250 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Emin/Protein_A.itp 609 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Emin/cgpolyALA_opls.Emin.gro 585 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Emin/cgpolyALA_opls.gro 5200 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Emin/cgpolyALA_opls.tpr 39 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Emin/mart_polyALA_Equil_POSRES.o3850085 4667 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Emin/mart_trp_zip.Emin.mdp 995 11-09-2014 16:51 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ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Equil/cgpolyALA_opls.confout.gro 39 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Equil/mart_polyALA_Equil_POSRES.o3850087 4671 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Equil/mart_trp_zip.Equil.mdp 995 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Equil/mart_trp_zip.top 10325 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Equil/mdout-cgpolyALA_opls.mdp 239 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Equil/qsub_cgsim_Equil.sh 2129 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Equil/run_gmx.sh 5364 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Equil/state.cpt 5364 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Equil/state_prev.cpt 145941 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Equil/table.xvg 14972 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Equil/table_a0.xvg 66469 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Equil/table_b0.xvg 29959 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Equil/table_d0.xvg 151039 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Equil/tablep.xvg 0 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/ 4250 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/Protein_A.itp 28704931 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/Rg.xvg 1307 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/Tick_Marks_Rg_Q_scatter.m 1337 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/Tick_Marks_Rg_rmsd_scatter.m 7268 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/angles.xvg 18525 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/bonds.xvg 18629 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/bonds_1-4.xvg 11647 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/bonds_1-4_all.xvg 16948 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/bonds_1-5_all.xvg 14842 11-09-2014 16:51 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ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/bonds_8-11.xvg 17166 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/bonds_9-12.xvg 1816 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/calc_dist.sh 2106 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/calc_dist_all1-4bonds.sh 1653 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/calc_dist_old.sh 0 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/cgff/ 961 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/cgff/L.Angle.total.angles.dat 1054 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/cgff/L.BondStretch.total.bonds.dat 3131 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/cgff/L.IntraMolec_NB_Pair.total.intra_1-4.dat 3441 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/cgff/L.IntraMolec_NB_Pair.total.intra_1-5.dat 6231 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/cgff/L.Pair_Interaction.total.pairs.dat 341 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/cgff/L_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 372 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/cgff/L_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 651 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/cgff/L_coeff.Pair_Interaction.total.pairs.dat 3769 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/cgff/Protein_A.itp 2352 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/cgff/S.dat 2352 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/cgff/S_CONST.dat 961 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/cgff/b_forces.Angle.total.angles.dat 1054 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/cgff/b_forces.BondStretch.total.bonds.dat 3131 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/cgff/b_forces.IntraMolec_NB_Pair.total.intra_1-4.dat 3441 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/cgff/b_forces.IntraMolec_NB_Pair.total.intra_1-5.dat 6231 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/cgff/b_forces.Pair_Interaction.total.pairs.dat 341 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/cgff/b_forces_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 372 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/cgff/b_forces_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 651 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/cgff/b_forces_coeff.Pair_Interaction.total.pairs.dat 961 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/cgff/b_struct.Angle.total.angles.dat 1054 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/cgff/b_struct.BondStretch.total.bonds.dat 3131 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/cgff/b_struct.IntraMolec_NB_Pair.total.intra_1-4.dat 3441 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/cgff/b_struct.IntraMolec_NB_Pair.total.intra_1-5.dat 6231 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/cgff/b_struct.Pair_Interaction.total.pairs.dat 341 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/cgff/b_struct_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 372 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/cgff/b_struct_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 651 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/cgff/b_struct_coeff.Pair_Interaction.total.pairs.dat 86748 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/cgff/cgff-polyALA-FM_noH2O.o3850137 651 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/cgff/cgpolyALA_opls.gro 2091 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/cgff/cgpolyALA_opls.mdp 445 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/cgff/cgpolyALA_opls.top 4164 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/cgff/cgpolyALA_opls.tpr 961 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/cgff/f_forces.Angle.total.angles.dat 1054 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/cgff/f_forces.BondStretch.total.bonds.dat 22351 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/cgff/f_forces.Dihedral.total.dihedrals.dat 3131 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/cgff/f_forces.IntraMolec_NB_Pair.total.intra_1-4.dat 3441 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/cgff/f_forces.IntraMolec_NB_Pair.total.intra_1-5.dat 6231 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/cgff/f_forces.Pair_Interaction.total.pairs.dat 341 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/cgff/f_forces_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 372 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/cgff/f_forces_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 651 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/cgff/f_forces_coeff.Pair_Interaction.total.pairs.dat 961 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/cgff/f_struct.Angle.total.angles.dat 1054 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/cgff/f_struct.BondStretch.total.bonds.dat 22351 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/cgff/f_struct.Dihedral.total.dihedrals.dat 3131 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/cgff/f_struct.IntraMolec_NB_Pair.total.intra_1-4.dat 3441 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/cgff/f_struct.IntraMolec_NB_Pair.total.intra_1-5.dat 6231 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/cgff/f_struct.Pair_Interaction.total.pairs.dat 341 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/cgff/f_struct_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 372 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/cgff/f_struct_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 651 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/cgff/f_struct_coeff.Pair_Interaction.total.pairs.dat 961 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/cgff/g.Angle.total.angles.dat 1054 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/cgff/g.BondStretch.total.bonds.dat 3131 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/cgff/g.IntraMolec_NB_Pair.total.intra_1-4.dat 3441 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/cgff/g.IntraMolec_NB_Pair.total.intra_1-5.dat 6231 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/cgff/g.Pair_Interaction.total.pairs.dat 961 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/cgff/g_cnt.Angle.total.angles.dat 1054 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/cgff/g_cnt.BondStretch.total.bonds.dat 3131 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/cgff/g_cnt.IntraMolec_NB_Pair.total.intra_1-4.dat 3441 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/cgff/g_cnt.IntraMolec_NB_Pair.total.intra_1-5.dat 6231 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/cgff/g_cnt.Pair_Interaction.total.pairs.dat 341 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/cgff/g_cnt_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 372 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/cgff/g_cnt_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 651 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/cgff/g_cnt_coeff.Pair_Interaction.total.pairs.dat 341 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/cgff/g_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 372 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/cgff/g_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 651 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/cgff/g_coeff.Pair_Interaction.total.pairs.dat 80 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/cgff/inp.txt 31733 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/cgff/log.txt 4834 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/cgff/out.total.txt 1816 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/cgff/par.txt 2069 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/cgff/qsub_cgff.sh 24 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/cgff/save.FF.dat 6610 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/cgff/save.L.dat 1133530 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/cgff/save.M.dat 1120925 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/cgff/save.M2.dat 1148018 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/cgff/save.M_cnt.dat 8 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/cgff/save.Nf.dat 6702 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/cgff/save.b_forces.dat 6719 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/cgff/save.b_struct.dat 1120933 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/cgff/save.d2M.dat 7193 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/cgff/save.d2b.dat 6689 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/cgff/save.g.dat 6535 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/cgff/save.g_cnt.dat 6535 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/cgff/save.rescale.dat 6174 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/cgff/summarize_input.txt 585 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/cgpolyALA_opls.gro 5200 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/cgpolyALA_opls.tpr 8004 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/dihedrals.xvg 9620280 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/distance.xvg 9620732 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/distance_bonds_1-4.dat.xvg 9620758 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/distance_bonds_2-5.dat.xvg 9620733 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/distance_bonds_3-6.dat.xvg 9620762 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/distance_bonds_4-7.dat.xvg 9620765 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/distance_bonds_5-8.dat.xvg 9620778 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/distance_bonds_6-9.dat.xvg 9620774 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/distance_bonds_7-10.dat.xvg 9620770 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/distance_bonds_8-11.dat.xvg 9620749 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/distance_bonds_9-12.dat.xvg 2049 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/cgsim/Prod_run/helicity.py 1745 11-09-2014 16:51 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ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/f_forces.BondStretch.total.bonds.dat 22351 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/f_forces.Dihedral.total.dihedrals.dat 2821 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/f_forces.IntraMolec_NB_Pair.total.intra_1-4.dat 2511 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/f_forces.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/f_forces.Pair_Interaction.total.pairs.dat 310 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/f_forces_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 279 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/f_forces_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/f_forces_coeff.Pair_Interaction.total.pairs.dat 775 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/f_struct.Angle.total.angles.dat 899 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/f_struct.BondStretch.total.bonds.dat 22351 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/f_struct.Dihedral.total.dihedrals.dat 2821 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/f_struct.IntraMolec_NB_Pair.total.intra_1-4.dat 2511 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/f_struct.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/f_struct.Pair_Interaction.total.pairs.dat 310 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/f_struct_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 279 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/f_struct_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/f_struct_coeff.Pair_Interaction.total.pairs.dat 0 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/force_files/ 1085 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/force_files/f_forces.Angle.total.angles.dat 1116 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/force_files/f_forces.BondStretch.total.bonds.dat 22351 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/force_files/f_forces.Dihedral.total.dihedrals.dat 4681 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/force_files/f_forces.IntraMolec_NB_Pair.total.intra_1-4.dat 6851 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/force_files/f_forces.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/force_files/f_forces.Pair_Interaction.total.pairs.dat 33 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/force_files/f_forces_coeff.Dihedral.total.dihedrals.dat 496 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/force_files/f_forces_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 713 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/force_files/f_forces_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/force_files/f_forces_coeff.Pair_Interaction.total.pairs.dat 527 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/force_files/force_imin1.angles.dat 399 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/force_files/force_imin1.bonds.dat 60 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/force_files/force_imin1.dihedrals.dat 147 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/force_files/force_imin1.intra_1-4.dat 198 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/force_files/force_imin1.intra_1-5.dat 175 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/force_files/force_imin1.pairs.dat 1383 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/force_files/make_force_file.py 446 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/force_i.angles.dat 514 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/force_i.bonds.dat 71 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/force_i.dihedrals.dat 191 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/force_i.intra_1-4.dat 173 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/force_i.intra_1-5.dat 361 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/force_i.pairs.dat 223 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/force_i_scale.angles.dat 315 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/force_i_scale.bonds.dat 36 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/force_i_scale.dihedrals.dat 111 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/force_i_scale.intra_1-4.dat 98 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/force_i_scale.intra_1-5.dat 207 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/force_i_scale.pairs.dat 214 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/force_imin1.angles.dat 315 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/force_imin1.bonds.dat 35 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/force_imin1.dihedrals.dat 110 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/force_imin1.intra_1-4.dat 123 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/force_imin1.intra_1-5.dat 204 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/force_imin1.pairs.dat 446 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/force_imin1_check.angles.dat 514 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/force_imin1_check.bonds.dat 71 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/force_imin1_check.dihedrals.dat 191 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/force_imin1_check.intra_1-4.dat 173 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/force_imin1_check.intra_1-5.dat 361 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/force_imin1_check.pairs.dat 107 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/inp.txt 31319 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/log.txt 2996 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/out.total.txt 1865 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/par.txt 2069 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/qsub_cgff_iter.sh 25 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/save.FF.dat 6577 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/save.L.dat 1126363 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/save.M.dat 1120925 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/save.M2.dat 1149038 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/save.M_cnt.dat 8 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/save.Nf.dat 6665 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/save.b_forces.dat 6781 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/save.b_struct.dat 1120933 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/save.d2M.dat 7038 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/save.d2b.dat 6622 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/save.g.dat 6534 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/save.g_cnt.dat 6532 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/save.rescale.dat 6553 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter3/summarize_input.txt 0 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/ 1120925 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/M2.dat 3769 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/Protein_A.itp 2058 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/S.dat 2058 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/S_CONST.dat 459 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/bAA.angles.dat 476 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/bAA.bonds.dat 51 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/bAA.dihedrals.dat 170 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/bAA.intra_1-4.dat 170 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/bAA.intra_1-5.dat 340 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/bAA.pairs.dat 459 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/b_soln_err.angles.dat 476 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/b_soln_err.bonds.dat 51 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/b_soln_err.dihedrals.dat 170 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/b_soln_err.intra_1-4.dat 170 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/b_soln_err.intra_1-5.dat 340 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/b_soln_err.pairs.dat 1980 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgff-polyALA-FM_noH2O.o3850139 651 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgpolyALA_opls.gro 2091 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgpolyALA_opls.mdp 445 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgpolyALA_opls.top 4164 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgpolyALA_opls.tpr 0 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/ 0 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Emin/ 338 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Emin/Emin_Commands.txt 4250 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Emin/Protein_A.itp 609 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Emin/cgpolyALA_opls.Emin.gro 585 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Emin/cgpolyALA_opls.gro 5200 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Emin/cgpolyALA_opls.tpr 39 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Emin/mart_polyALA_Equil_POSRES.o3850140 4667 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Emin/mart_trp_zip.Emin.mdp 995 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Emin/mart_trp_zip.top 10323 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Emin/mdout-cgpolyALA_opls.mdp 239 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Emin/qsub_cgsim_Emin.sh 2100 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Emin/run_gmx.sh 145905 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Emin/table.xvg 14967 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Emin/table_a0.xvg 66469 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Emin/table_b0.xvg 29959 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Emin/table_d0.xvg 151036 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Emin/tablep.xvg 0 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Equil/ 4250 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Equil/Protein_A.itp 5200 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Equil/cgpolyALA_opls.Equil.tpr 897 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Equil/cgpolyALA_opls.confout.gro 39 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Equil/mart_polyALA_Equil_POSRES.o3850144 4671 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Equil/mart_trp_zip.Equil.mdp 995 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Equil/mart_trp_zip.top 10325 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Equil/mdout-cgpolyALA_opls.mdp 239 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Equil/qsub_cgsim_Equil.sh 2129 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Equil/run_gmx.sh 5364 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Equil/state.cpt 5364 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Equil/state_prev.cpt 145905 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Equil/table.xvg 14967 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Equil/table_a0.xvg 66469 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Equil/table_b0.xvg 29959 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Equil/table_d0.xvg 151036 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Equil/tablep.xvg 0 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/ 4250 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/Protein_A.itp 59000641 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/Rg.xvg 1307 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/Tick_Marks_Rg_Q_scatter.m 1337 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/Tick_Marks_Rg_rmsd_scatter.m 2024 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/angles.xvg 10849 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/bonds.xvg 8722 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/bonds_1-4.xvg 6042 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/bonds_1-4_all.xvg 4636 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/bonds_1-5_all.xvg 8846 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/bonds_2-5.xvg 8683 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/bonds_3-6.xvg 7374 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/bonds_4-7.xvg 7284 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/bonds_5-8.xvg 7442 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/bonds_6-9.xvg 8419 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/bonds_7-10.xvg 8657 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/bonds_8-11.xvg 9775 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/bonds_9-12.xvg 1816 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/calc_dist.sh 2106 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/calc_dist_all1-4bonds.sh 1653 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/calc_dist_old.sh 0 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/cgff/ 1054 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/cgff/L.Angle.total.angles.dat 1116 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/cgff/L.BondStretch.total.bonds.dat 3751 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/cgff/L.IntraMolec_NB_Pair.total.intra_1-4.dat 3441 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/cgff/L.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/cgff/L.Pair_Interaction.total.pairs.dat 403 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/cgff/L_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 372 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/cgff/L_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/cgff/L_coeff.Pair_Interaction.total.pairs.dat 3769 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/cgff/Protein_A.itp 2478 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/cgff/S.dat 2478 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/cgff/S_CONST.dat 1054 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/cgff/b_forces.Angle.total.angles.dat 1116 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/cgff/b_forces.BondStretch.total.bonds.dat 3751 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/cgff/b_forces.IntraMolec_NB_Pair.total.intra_1-4.dat 3441 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/cgff/b_forces.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/cgff/b_forces.Pair_Interaction.total.pairs.dat 403 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/cgff/b_forces_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 372 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/cgff/b_forces_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/cgff/b_forces_coeff.Pair_Interaction.total.pairs.dat 1054 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/cgff/b_struct.Angle.total.angles.dat 1116 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/cgff/b_struct.BondStretch.total.bonds.dat 3751 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/cgff/b_struct.IntraMolec_NB_Pair.total.intra_1-4.dat 3441 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/cgff/b_struct.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/cgff/b_struct.Pair_Interaction.total.pairs.dat 403 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/cgff/b_struct_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 372 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/cgff/b_struct_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/cgff/b_struct_coeff.Pair_Interaction.total.pairs.dat 169164 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/cgff/cgff-polyALA-FM_noH2O.o3850176 651 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/cgff/cgpolyALA_opls.gro 2091 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/cgff/cgpolyALA_opls.mdp 445 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/cgff/cgpolyALA_opls.top 4164 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/cgff/cgpolyALA_opls.tpr 1054 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/cgff/f_forces.Angle.total.angles.dat 1116 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/cgff/f_forces.BondStretch.total.bonds.dat 22351 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/cgff/f_forces.Dihedral.total.dihedrals.dat 3751 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/cgff/f_forces.IntraMolec_NB_Pair.total.intra_1-4.dat 3441 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/cgff/f_forces.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/cgff/f_forces.Pair_Interaction.total.pairs.dat 403 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/cgff/f_forces_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 372 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/cgff/f_forces_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/cgff/f_forces_coeff.Pair_Interaction.total.pairs.dat 1054 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/cgff/f_struct.Angle.total.angles.dat 1116 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/cgff/f_struct.BondStretch.total.bonds.dat 22351 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/cgff/f_struct.Dihedral.total.dihedrals.dat 3751 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/cgff/f_struct.IntraMolec_NB_Pair.total.intra_1-4.dat 3441 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/cgff/f_struct.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/cgff/f_struct.Pair_Interaction.total.pairs.dat 403 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/cgff/f_struct_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 372 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/cgff/f_struct_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/cgff/f_struct_coeff.Pair_Interaction.total.pairs.dat 1054 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/cgff/g.Angle.total.angles.dat 1116 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/cgff/g.BondStretch.total.bonds.dat 3751 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/cgff/g.IntraMolec_NB_Pair.total.intra_1-4.dat 3441 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/cgff/g.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/cgff/g.Pair_Interaction.total.pairs.dat 1054 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/cgff/g_cnt.Angle.total.angles.dat 1116 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/cgff/g_cnt.BondStretch.total.bonds.dat 3751 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/cgff/g_cnt.IntraMolec_NB_Pair.total.intra_1-4.dat 3441 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/cgff/g_cnt.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/cgff/g_cnt.Pair_Interaction.total.pairs.dat 403 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/cgff/g_cnt_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 372 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/cgff/g_cnt_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/cgff/g_cnt_coeff.Pair_Interaction.total.pairs.dat 403 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/cgff/g_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 372 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/cgff/g_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/cgff/g_coeff.Pair_Interaction.total.pairs.dat 80 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/cgff/inp.txt 31866 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/cgff/log.txt 4830 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/cgff/out.total.txt 1816 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/cgff/par.txt 2069 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/cgff/qsub_cgff.sh 24 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/cgff/save.FF.dat 6562 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/cgff/save.L.dat 1126967 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/cgff/save.M.dat 1120925 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/cgff/save.M2.dat 1152336 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/cgff/save.M_cnt.dat 9 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/cgff/save.Nf.dat 6632 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/cgff/save.b_forces.dat 6802 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/cgff/save.b_struct.dat 1120933 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/cgff/save.d2M.dat 6878 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/cgff/save.d2b.dat 6602 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/cgff/save.g.dat 6535 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/cgff/save.g_cnt.dat 6535 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/cgff/save.rescale.dat 6174 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/cgff/summarize_input.txt 897 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/cgpolyALA_opls.confout.gro 585 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/cgpolyALA_opls.gro 5200 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/cgpolyALA_opls.tpr 1794 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/cgsim/Prod_run/dihedrals.xvg 19890021 11-09-2014 16:51 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ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/f_struct.Angle.total.angles.dat 868 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/f_struct.BondStretch.total.bonds.dat 22351 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/f_struct.Dihedral.total.dihedrals.dat 2821 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/f_struct.IntraMolec_NB_Pair.total.intra_1-4.dat 2821 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/f_struct.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/f_struct.Pair_Interaction.total.pairs.dat 310 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/f_struct_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 310 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/f_struct_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/f_struct_coeff.Pair_Interaction.total.pairs.dat 0 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/force_files/ 1085 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/force_files/f_forces.Angle.total.angles.dat 1116 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/force_files/f_forces.BondStretch.total.bonds.dat 22351 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/force_files/f_forces.Dihedral.total.dihedrals.dat 4681 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/force_files/f_forces.IntraMolec_NB_Pair.total.intra_1-4.dat 6851 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/force_files/f_forces.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/force_files/f_forces.Pair_Interaction.total.pairs.dat 33 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/force_files/f_forces_coeff.Dihedral.total.dihedrals.dat 496 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/force_files/f_forces_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 713 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/force_files/f_forces_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/force_files/f_forces_coeff.Pair_Interaction.total.pairs.dat 527 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/force_files/force_imin1.angles.dat 399 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/force_files/force_imin1.bonds.dat 60 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/force_files/force_imin1.dihedrals.dat 147 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/force_files/force_imin1.intra_1-4.dat 198 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/force_files/force_imin1.intra_1-5.dat 175 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/force_files/force_imin1.pairs.dat 1383 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/force_files/make_force_file.py 480 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/force_i.angles.dat 497 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/force_i.bonds.dat 71 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/force_i.dihedrals.dat 191 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/force_i.intra_1-4.dat 191 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/force_i.intra_1-5.dat 361 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/force_i.pairs.dat 236 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/force_i_scale.angles.dat 301 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/force_i_scale.bonds.dat 37 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/force_i_scale.dihedrals.dat 109 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/force_i_scale.intra_1-4.dat 112 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/force_i_scale.intra_1-5.dat 204 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/force_i_scale.pairs.dat 223 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/force_imin1.angles.dat 315 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/force_imin1.bonds.dat 36 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/force_imin1.dihedrals.dat 111 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/force_imin1.intra_1-4.dat 98 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/force_imin1.intra_1-5.dat 207 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/force_imin1.pairs.dat 480 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/force_imin1_check.angles.dat 497 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/force_imin1_check.bonds.dat 71 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/force_imin1_check.dihedrals.dat 191 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/force_imin1_check.intra_1-4.dat 191 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/force_imin1_check.intra_1-5.dat 361 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/force_imin1_check.pairs.dat 107 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/inp.txt 31363 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/log.txt 2997 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/out.total.txt 1865 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/par.txt 2069 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/qsub_cgff_iter.sh 25 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/save.FF.dat 6577 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/save.L.dat 1133530 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/save.M.dat 1120925 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/save.M2.dat 1148018 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/save.M_cnt.dat 8 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/save.Nf.dat 6665 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/save.b_forces.dat 6781 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/save.b_struct.dat 1120933 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/save.d2M.dat 7038 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/save.d2b.dat 6622 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/save.g.dat 6535 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/save.g_cnt.dat 6532 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/save.rescale.dat 6553 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter4/summarize_input.txt 0 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/ 1120925 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/M2.dat 3769 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/Protein_A.itp 2079 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/S.dat 2079 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/S_CONST.dat 459 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/bAA.angles.dat 476 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/bAA.bonds.dat 51 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/bAA.dihedrals.dat 187 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/bAA.intra_1-4.dat 170 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/bAA.intra_1-5.dat 340 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/bAA.pairs.dat 459 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/b_soln_err.angles.dat 476 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/b_soln_err.bonds.dat 51 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/b_soln_err.dihedrals.dat 187 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/b_soln_err.intra_1-4.dat 170 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/b_soln_err.intra_1-5.dat 340 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/b_soln_err.pairs.dat 1982 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/cgff-polyALA-FM_noH2O.o3850183 651 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/cgpolyALA_opls.gro 2091 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/cgpolyALA_opls.mdp 445 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/cgpolyALA_opls.top 4164 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/cgpolyALA_opls.tpr 0 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/cgsim/ 0 11-09-2014 16:51 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ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/edit/f_forces.IntraMolec_NB_Pair.total.intra_1-4.dat 2821 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/edit/f_forces.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/edit/f_forces.Pair_Interaction.total.pairs.dat 341 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/edit/f_forces_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 310 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/edit/f_forces_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/edit/f_forces_coeff.Pair_Interaction.total.pairs.dat 5921 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/edit/f_pairs.dat 3399 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/edit/f_pairs_lambda.dat 24 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/edit/lam.txt 4 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/edit/lam_min.txt 4 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/edit/lam_min_tmp.txt 24 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/edit/lam_old.txt 841 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/edit/run.make_gmx4_table.sh 918 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/edit/scale_lambda_1-4.py 839 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/edit/scale_lambda_1-4_force.py 918 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/edit/scale_lambda_1-5.py 839 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/edit/scale_lambda_1-5_force.py 918 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/edit/scale_lambda_angle.py 830 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/edit/scale_lambda_angle_force.py 917 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/edit/scale_lambda_bond.py 827 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/edit/scale_lambda_bond_force.py 916 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/edit/scale_lambda_dih.py 839 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/edit/scale_lambda_dih_force.py 915 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/edit/scale_lambda_pairs.py 827 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/edit/scale_lambda_pairs_force.py 145902 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/edit/table.xvg 14968 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/edit/table_a0.xvg 14967 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/edit/table_a0_old.xvg 66469 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/edit/table_b0.xvg 66469 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/edit/table_b0_old.xvg 29959 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/edit/table_d0.xvg 29959 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/edit/table_d0_old.xvg 29961 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/edit/table_d0_ref.xvg 145905 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/edit/table_old.xvg 151040 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/edit/tablep.xvg 146876 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/edit/tablep_1-4.xvg 146860 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/edit/tablep_1-4_old.xvg 146758 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/edit/tablep_1-5.xvg 146770 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/edit/tablep_1-5_old.xvg 837 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/f_forces.Angle.total.angles.dat 868 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/f_forces.BondStretch.total.bonds.dat 22351 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/f_forces.Dihedral.total.dihedrals.dat 3131 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/f_forces.IntraMolec_NB_Pair.total.intra_1-4.dat 2821 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/f_forces.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/f_forces.Pair_Interaction.total.pairs.dat 341 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/f_forces_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 310 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/f_forces_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/f_forces_coeff.Pair_Interaction.total.pairs.dat 837 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/f_struct.Angle.total.angles.dat 868 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/f_struct.BondStretch.total.bonds.dat 22351 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/f_struct.Dihedral.total.dihedrals.dat 3131 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/f_struct.IntraMolec_NB_Pair.total.intra_1-4.dat 2821 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/f_struct.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/f_struct.Pair_Interaction.total.pairs.dat 341 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/f_struct_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 310 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/f_struct_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/f_struct_coeff.Pair_Interaction.total.pairs.dat 0 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/force_files/ 1085 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/force_files/f_forces.Angle.total.angles.dat 1116 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/force_files/f_forces.BondStretch.total.bonds.dat 22351 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/force_files/f_forces.Dihedral.total.dihedrals.dat 4681 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/force_files/f_forces.IntraMolec_NB_Pair.total.intra_1-4.dat 6851 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/force_files/f_forces.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/force_files/f_forces.Pair_Interaction.total.pairs.dat 33 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/force_files/f_forces_coeff.Dihedral.total.dihedrals.dat 496 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/force_files/f_forces_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 713 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/force_files/f_forces_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/force_files/f_forces_coeff.Pair_Interaction.total.pairs.dat 527 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/force_files/force_imin1.angles.dat 399 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/force_files/force_imin1.bonds.dat 60 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/force_files/force_imin1.dihedrals.dat 147 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/force_files/force_imin1.intra_1-4.dat 198 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/force_files/force_imin1.intra_1-5.dat 175 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/force_files/force_imin1.pairs.dat 1383 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/force_files/make_force_file.py 480 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/force_i.angles.dat 497 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/force_i.bonds.dat 71 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/force_i.dihedrals.dat 208 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/force_i.intra_1-4.dat 191 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/force_i.intra_1-5.dat 361 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/force_i.pairs.dat 237 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/force_i_scale.angles.dat 300 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/force_i_scale.bonds.dat 37 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/force_i_scale.dihedrals.dat 124 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/force_i_scale.intra_1-4.dat 112 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/force_i_scale.intra_1-5.dat 206 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/force_i_scale.pairs.dat 236 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/force_imin1.angles.dat 301 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/force_imin1.bonds.dat 37 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/force_imin1.dihedrals.dat 109 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/force_imin1.intra_1-4.dat 112 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/force_imin1.intra_1-5.dat 204 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/force_imin1.pairs.dat 480 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/force_imin1_check.angles.dat 497 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/force_imin1_check.bonds.dat 71 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/force_imin1_check.dihedrals.dat 208 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/force_imin1_check.intra_1-4.dat 191 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/force_imin1_check.intra_1-5.dat 361 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/force_imin1_check.pairs.dat 107 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/inp.txt 31385 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/log.txt 2999 11-09-2014 16:51 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1152336 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/save.M_cnt.dat 8 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/save.Nf.dat 6665 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/save.b_forces.dat 6781 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/save.b_struct.dat 1120933 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/save.d2M.dat 7038 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter5/save.d2b.dat 6622 11-09-2014 16:51 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11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter6/cgsim/Prod_run/cgff/cgpolyALA_opls.mdp 445 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter6/cgsim/Prod_run/cgff/cgpolyALA_opls.top 4164 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter6/cgsim/Prod_run/cgff/cgpolyALA_opls.tpr 80 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter6/cgsim/Prod_run/cgff/inp.txt 0 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter6/cgsim/Prod_run/cgff/log.txt 1816 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter6/cgsim/Prod_run/cgff/par.txt 2069 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter6/cgsim/Prod_run/cgff/qsub_cgff.sh 6174 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter6/cgsim/Prod_run/cgff/summarize_input.txt 585 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter6/cgsim/Prod_run/cgpolyALA_opls.gro 73 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter6/cgsim/Prod_run/dihedrals.xvg 2049 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter6/cgsim/Prod_run/helicity.py 1745 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter6/cgsim/Prod_run/index.ndx 558 11-09-2014 16:51 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240 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter6/cgsim/Prod_run/qsub_cgsim_NVT.sh 461 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter6/cgsim/Prod_run/rmsd.xvg 2115 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter6/cgsim/Prod_run/run_gmx.sh 363 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter6/cgsim/Prod_run/scatter.py 0 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter6/cgsim/Prod_run/table.xvg 0 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter6/cgsim/Prod_run/table_a0.xvg 0 11-09-2014 16:51 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16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter6/force_imin1.angles.dat 300 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter6/force_imin1.bonds.dat 37 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter6/force_imin1.dihedrals.dat 124 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter6/force_imin1.intra_1-4.dat 112 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter6/force_imin1.intra_1-5.dat 206 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter6/force_imin1.pairs.dat 107 11-09-2014 16:51 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11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter7/save.Nf.dat 6665 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter7/save.b_forces.dat 6781 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter7/save.b_struct.dat 1120933 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter7/save.d2M.dat 7038 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter7/save.d2b.dat 6622 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter7/save.g.dat 6532 11-09-2014 16:51 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ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter8/edit/combine_tables.py 24 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter8/edit/error.txt 183 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter8/edit/f_1-4_lambda.dat 183 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter8/edit/f_1-5_lambda.dat 189 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter8/edit/f_angle_lambda.dat 186 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter8/edit/f_bond_lambda.dat 234 11-09-2014 16:51 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ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter9/edit/combine_tables.py 24 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter9/edit/error.txt 183 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter9/edit/f_1-4_lambda.dat 183 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter9/edit/f_1-5_lambda.dat 189 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter9/edit/f_angle_lambda.dat 186 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_1-5_CGdih/iter9/edit/f_bond_lambda.dat 234 11-09-2014 16:51 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ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/ 930 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/L.Angle.total.angles_1-2-3.dat 1240 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/L.Angle.total.angles_10-11-12.dat 868 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/L.Angle.total.angles_2-3-4.dat 992 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/L.Angle.total.angles_9-10-11.dat 806 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/L.Angle.total.angles_mid.dat 1116 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/L.BondStretch.total.bonds.dat 5890 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/L.Dihedral.total.dihedrals_1-2-3-4.dat 4960 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/L.Dihedral.total.dihedrals_2-3-4-5.dat 5890 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/L.Dihedral.total.dihedrals_8-9-10-11.dat 7130 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/L.Dihedral.total.dihedrals_9-10-11-12.dat 4650 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/L.Dihedral.total.dihedrals_mid.dat 4991 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/L.Pair_Interaction.total.intra_1-4.dat 3751 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/L.Pair_Interaction.total.intra_1-4mid.dat 4371 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/L.Pair_Interaction.total.intra_2-5.dat 4681 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/L.Pair_Interaction.total.intra_8-11.dat 5301 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/L.Pair_Interaction.total.intra_9-12.dat 9951 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/L.Pair_Interaction.total.pairs.dat 589 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/L_coeff.Dihedral.total.dihedrals_1-2-3-4.dat 496 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/L_coeff.Dihedral.total.dihedrals_2-3-4-5.dat 589 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/L_coeff.Dihedral.total.dihedrals_8-9-10-11.dat 713 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/L_coeff.Dihedral.total.dihedrals_9-10-11-12.dat 465 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/L_coeff.Dihedral.total.dihedrals_mid.dat 527 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/L_coeff.Pair_Interaction.total.intra_1-4.dat 403 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/L_coeff.Pair_Interaction.total.intra_1-4mid.dat 465 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/L_coeff.Pair_Interaction.total.intra_2-5.dat 496 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/L_coeff.Pair_Interaction.total.intra_8-11.dat 558 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/L_coeff.Pair_Interaction.total.intra_9-12.dat 1023 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/L_coeff.Pair_Interaction.total.pairs.dat 3787 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/Protein_A.itp 8316 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/S.dat 930 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/b_forces.Angle.total.angles_1-2-3.dat 1240 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/b_forces.Angle.total.angles_10-11-12.dat 868 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/b_forces.Angle.total.angles_2-3-4.dat 992 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/b_forces.Angle.total.angles_9-10-11.dat 806 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/b_forces.Angle.total.angles_mid.dat 1116 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/b_forces.BondStretch.total.bonds.dat 5890 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/b_forces.Dihedral.total.dihedrals_1-2-3-4.dat 4960 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/b_forces.Dihedral.total.dihedrals_2-3-4-5.dat 5890 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/b_forces.Dihedral.total.dihedrals_8-9-10-11.dat 7130 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/b_forces.Dihedral.total.dihedrals_9-10-11-12.dat 4650 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/b_forces.Dihedral.total.dihedrals_mid.dat 4991 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/b_forces.Pair_Interaction.total.intra_1-4.dat 3751 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/b_forces.Pair_Interaction.total.intra_1-4mid.dat 4371 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/b_forces.Pair_Interaction.total.intra_2-5.dat 4681 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/b_forces.Pair_Interaction.total.intra_8-11.dat 5301 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/b_forces.Pair_Interaction.total.intra_9-12.dat 9951 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/b_forces.Pair_Interaction.total.pairs.dat 589 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/b_forces_coeff.Dihedral.total.dihedrals_1-2-3-4.dat 496 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/b_forces_coeff.Dihedral.total.dihedrals_2-3-4-5.dat 589 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/b_forces_coeff.Dihedral.total.dihedrals_8-9-10-11.dat 713 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/b_forces_coeff.Dihedral.total.dihedrals_9-10-11-12.dat 465 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/b_forces_coeff.Dihedral.total.dihedrals_mid.dat 527 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/b_forces_coeff.Pair_Interaction.total.intra_1-4.dat 403 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/b_forces_coeff.Pair_Interaction.total.intra_1-4mid.dat 465 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/b_forces_coeff.Pair_Interaction.total.intra_2-5.dat 496 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/b_forces_coeff.Pair_Interaction.total.intra_8-11.dat 558 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/b_forces_coeff.Pair_Interaction.total.intra_9-12.dat 1023 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/b_forces_coeff.Pair_Interaction.total.pairs.dat 930 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/b_struct.Angle.total.angles_1-2-3.dat 1240 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/b_struct.Angle.total.angles_10-11-12.dat 868 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/b_struct.Angle.total.angles_2-3-4.dat 992 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/b_struct.Angle.total.angles_9-10-11.dat 806 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/b_struct.Angle.total.angles_mid.dat 1116 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/b_struct.BondStretch.total.bonds.dat 5890 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/b_struct.Dihedral.total.dihedrals_1-2-3-4.dat 4960 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/b_struct.Dihedral.total.dihedrals_2-3-4-5.dat 5890 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/b_struct.Dihedral.total.dihedrals_8-9-10-11.dat 7130 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/b_struct.Dihedral.total.dihedrals_9-10-11-12.dat 4650 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/b_struct.Dihedral.total.dihedrals_mid.dat 4991 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/b_struct.Pair_Interaction.total.intra_1-4.dat 3751 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/b_struct.Pair_Interaction.total.intra_1-4mid.dat 4371 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/b_struct.Pair_Interaction.total.intra_2-5.dat 4681 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/b_struct.Pair_Interaction.total.intra_8-11.dat 5301 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/b_struct.Pair_Interaction.total.intra_9-12.dat 9951 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/b_struct.Pair_Interaction.total.pairs.dat 589 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/b_struct_coeff.Dihedral.total.dihedrals_1-2-3-4.dat 496 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/b_struct_coeff.Dihedral.total.dihedrals_2-3-4-5.dat 589 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/b_struct_coeff.Dihedral.total.dihedrals_8-9-10-11.dat 713 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/b_struct_coeff.Dihedral.total.dihedrals_9-10-11-12.dat 465 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/b_struct_coeff.Dihedral.total.dihedrals_mid.dat 527 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/b_struct_coeff.Pair_Interaction.total.intra_1-4.dat 403 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/b_struct_coeff.Pair_Interaction.total.intra_1-4mid.dat 465 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/b_struct_coeff.Pair_Interaction.total.intra_2-5.dat 496 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/b_struct_coeff.Pair_Interaction.total.intra_8-11.dat 558 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/b_struct_coeff.Pair_Interaction.total.intra_9-12.dat 1023 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/b_struct_coeff.Pair_Interaction.total.pairs.dat 58316 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgff-polyALA-FM_noH2O.o3931788 651 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgpolyALA_opls.gro 2091 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgpolyALA_opls.mdp 995 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgpolyALA_opls.top 5032 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgpolyALA_opls.tpr 0 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/ 0 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Emin/ 338 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Emin/Emin_Commands.txt 4268 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Emin/Protein_A.itp 609 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Emin/cgpolyALA_opls.Emin.gro 585 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Emin/cgpolyALA_opls.gro 5488 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Emin/cgpolyALA_opls.tpr 186 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Emin/index.ndx 38 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Emin/mart_polyALA_Equil_POSRES.o3933582 4826 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Emin/mart_trp_zip.Emin.mdp 995 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Emin/mart_trp_zip.top 10410 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Emin/mdout-cgpolyALA_opls.mdp 238 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Emin/qsub.sh 2102 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Emin/run_gmx.sh 145645 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Emin/table.xvg 145855 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Emin/table_A1_A4.xvg 145863 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Emin/table_A2_A5.xvg 145823 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Emin/table_A3_A6.xvg 145823 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Emin/table_A4_A7.xvg 145823 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Emin/table_A5_A8.xvg 145823 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Emin/table_A6_A9.xvg 145823 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Emin/table_A7_A10.xvg 145874 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Emin/table_A8_A11.xvg 145633 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Emin/table_A9_A12.xvg 14985 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Emin/table_a0.xvg 14977 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Emin/table_a1.xvg 14974 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Emin/table_a2.xvg 14984 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Emin/table_a3.xvg 14989 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Emin/table_a4.xvg 66469 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Emin/table_b0.xvg 29856 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Emin/table_d0.xvg 29786 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Emin/table_d1.xvg 29888 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Emin/table_d2.xvg 29854 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Emin/table_d3.xvg 29921 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Emin/table_d4.xvg 0 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Equil/ 4268 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Equil/Protein_A.itp 5488 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Equil/cgpolyALA_opls.Equil.tpr 897 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Equil/cgpolyALA_opls.confout.gro 186 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Equil/index.ndx 108 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Equil/mart_polyALA_Equil_POSRES.o3933826 4831 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Equil/mart_trp_zip.Equil.mdp 995 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Equil/mart_trp_zip.top 10412 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Equil/mdout-cgpolyALA_opls.mdp 232 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Equil/qsub.sh 2133 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Equil/run_gmx.sh 9060 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Equil/state.cpt 145645 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Equil/table.xvg 145855 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Equil/table_A1_A4.xvg 145863 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Equil/table_A2_A5.xvg 145823 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Equil/table_A3_A6.xvg 145823 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Equil/table_A4_A7.xvg 145823 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Equil/table_A5_A8.xvg 145823 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Equil/table_A6_A9.xvg 145823 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Equil/table_A7_A10.xvg 145874 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Equil/table_A8_A11.xvg 145633 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Equil/table_A9_A12.xvg 14985 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Equil/table_a0.xvg 14977 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Equil/table_a1.xvg 14974 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Equil/table_a2.xvg 14984 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Equil/table_a3.xvg 14989 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Equil/table_a4.xvg 66469 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Equil/table_b0.xvg 29856 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Equil/table_d0.xvg 29786 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Equil/table_d1.xvg 29888 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Equil/table_d2.xvg 29854 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Equil/table_d3.xvg 29921 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Equil/table_d4.xvg 0 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Prod_run/ 4268 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Prod_run/Protein_A.itp 32450676 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Prod_run/Rg.xvg 1307 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Prod_run/Tick_Marks_Rg_Q_scatter.m 1855 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Prod_run/Tick_Marks_Rg_Q_scatter_SJdivAA.m 1337 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Prod_run/Tick_Marks_Rg_rmsd_scatter.m 2369 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Prod_run/angles.xvg 1386 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Prod_run/angles_1-2-3.xvg 1683 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Prod_run/angles_10-11-12.xvg 1427 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Prod_run/angles_2-3-4.xvg 1438 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Prod_run/angles_9-10-11.xvg 1338 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Prod_run/angles_mid.xvg 11590 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Prod_run/bonds.xvg 5852 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Prod_run/bonds_1-4.xvg 6973 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Prod_run/bonds_1-4_all.xvg 6460 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Prod_run/bonds_1-4mid.xvg 8094 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Prod_run/bonds_1-5_all.xvg 6422 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Prod_run/bonds_2-5.xvg 6175 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Prod_run/bonds_3-6.xvg 6327 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Prod_run/bonds_4-7.xvg 5909 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Prod_run/bonds_5-8.xvg 6023 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Prod_run/bonds_6-9.xvg 6441 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Prod_run/bonds_7-10.xvg 6726 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Prod_run/bonds_8-11.xvg 5890 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Prod_run/bonds_9-12.xvg 1871 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Prod_run/calc_dist.sh 2136 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Prod_run/calc_dist_all1-4bonds.sh 1976 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Prod_run/calc_dist_all1-5bonds.sh 2058 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Prod_run/calc_dist_endtypes.sh 1020 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Prod_run/calc_dist_rdf.sh 5368 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Prod_run/cgpolyALA_opls.3excl.tpr 4924 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Prod_run/cgpolyALA_opls.4excl.tpr 897 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Prod_run/cgpolyALA_opls.confout.gro 585 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Prod_run/cgpolyALA_opls.gro 5488 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Prod_run/cgpolyALA_opls.tpr 3174 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Prod_run/dihedrals.xvg 3150 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Prod_run/dihedrals_1-2-3-4.xvg 2913 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Prod_run/dihedrals_2-3-4-5.xvg 3138 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/cgsim/Prod_run/dihedrals_8-9-10-11.xvg 3813 11-09-2014 16:51 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ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/edit/table_a4.xvg 66469 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/edit/table_b0.xvg 29856 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/edit/table_d0.xvg 29786 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/edit/table_d1.xvg 29888 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/edit/table_d2.xvg 29854 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/edit/table_d3.xvg 29921 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/edit/table_d4.xvg 930 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/f_forces.Angle.total.angles_1-2-3.dat 1240 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/f_forces.Angle.total.angles_10-11-12.dat 868 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/f_forces.Angle.total.angles_2-3-4.dat 992 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/f_forces.Angle.total.angles_9-10-11.dat 806 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/f_forces.Angle.total.angles_mid.dat 1116 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/f_forces.BondStretch.total.bonds.dat 5890 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/f_forces.Dihedral.total.dihedrals_1-2-3-4.dat 4960 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/f_forces.Dihedral.total.dihedrals_2-3-4-5.dat 5890 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/f_forces.Dihedral.total.dihedrals_8-9-10-11.dat 7130 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/f_forces.Dihedral.total.dihedrals_9-10-11-12.dat 4650 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/f_forces.Dihedral.total.dihedrals_mid.dat 4991 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/f_forces.Pair_Interaction.total.intra_1-4.dat 3751 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/f_forces.Pair_Interaction.total.intra_1-4mid.dat 4371 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/f_forces.Pair_Interaction.total.intra_2-5.dat 4681 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/f_forces.Pair_Interaction.total.intra_8-11.dat 5301 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/f_forces.Pair_Interaction.total.intra_9-12.dat 9951 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/f_forces.Pair_Interaction.total.pairs.dat 589 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/f_forces_coeff.Dihedral.total.dihedrals_1-2-3-4.dat 496 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/f_forces_coeff.Dihedral.total.dihedrals_2-3-4-5.dat 589 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/f_forces_coeff.Dihedral.total.dihedrals_8-9-10-11.dat 713 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/f_forces_coeff.Dihedral.total.dihedrals_9-10-11-12.dat 465 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/f_forces_coeff.Dihedral.total.dihedrals_mid.dat 527 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/f_forces_coeff.Pair_Interaction.total.intra_1-4.dat 403 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/f_forces_coeff.Pair_Interaction.total.intra_1-4mid.dat 465 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/f_forces_coeff.Pair_Interaction.total.intra_2-5.dat 496 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/f_forces_coeff.Pair_Interaction.total.intra_8-11.dat 558 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/f_forces_coeff.Pair_Interaction.total.intra_9-12.dat 1023 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/f_forces_coeff.Pair_Interaction.total.pairs.dat 930 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/f_struct.Angle.total.angles_1-2-3.dat 1240 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/f_struct.Angle.total.angles_10-11-12.dat 868 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/f_struct.Angle.total.angles_2-3-4.dat 992 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/f_struct.Angle.total.angles_9-10-11.dat 806 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/f_struct.Angle.total.angles_mid.dat 1116 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/f_struct.BondStretch.total.bonds.dat 5890 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/f_struct.Dihedral.total.dihedrals_1-2-3-4.dat 4960 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/f_struct.Dihedral.total.dihedrals_2-3-4-5.dat 5890 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/f_struct.Dihedral.total.dihedrals_8-9-10-11.dat 7130 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/f_struct.Dihedral.total.dihedrals_9-10-11-12.dat 4650 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/f_struct.Dihedral.total.dihedrals_mid.dat 4991 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/f_struct.Pair_Interaction.total.intra_1-4.dat 3751 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/f_struct.Pair_Interaction.total.intra_1-4mid.dat 4371 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/f_struct.Pair_Interaction.total.intra_2-5.dat 4681 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/f_struct.Pair_Interaction.total.intra_8-11.dat 5301 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/f_struct.Pair_Interaction.total.intra_9-12.dat 9951 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/f_struct.Pair_Interaction.total.pairs.dat 589 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/f_struct_coeff.Dihedral.total.dihedrals_1-2-3-4.dat 496 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/f_struct_coeff.Dihedral.total.dihedrals_2-3-4-5.dat 589 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/f_struct_coeff.Dihedral.total.dihedrals_8-9-10-11.dat 713 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/f_struct_coeff.Dihedral.total.dihedrals_9-10-11-12.dat 465 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/f_struct_coeff.Dihedral.total.dihedrals_mid.dat 527 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/f_struct_coeff.Pair_Interaction.total.intra_1-4.dat 403 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/f_struct_coeff.Pair_Interaction.total.intra_1-4mid.dat 465 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/f_struct_coeff.Pair_Interaction.total.intra_2-5.dat 496 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/f_struct_coeff.Pair_Interaction.total.intra_8-11.dat 558 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/f_struct_coeff.Pair_Interaction.total.intra_9-12.dat 1023 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/f_struct_coeff.Pair_Interaction.total.pairs.dat 930 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/g.Angle.total.angles_1-2-3.dat 1240 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/g.Angle.total.angles_10-11-12.dat 868 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/g.Angle.total.angles_2-3-4.dat 992 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/g.Angle.total.angles_9-10-11.dat 806 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/g.Angle.total.angles_mid.dat 1116 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/g.BondStretch.total.bonds.dat 5890 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/g.Dihedral.total.dihedrals_1-2-3-4.dat 4960 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/g.Dihedral.total.dihedrals_2-3-4-5.dat 5890 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/g.Dihedral.total.dihedrals_8-9-10-11.dat 7130 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/g.Dihedral.total.dihedrals_9-10-11-12.dat 4650 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/g.Dihedral.total.dihedrals_mid.dat 4991 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/g.Pair_Interaction.total.intra_1-4.dat 3751 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/g.Pair_Interaction.total.intra_1-4mid.dat 4371 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/g.Pair_Interaction.total.intra_2-5.dat 4681 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/g.Pair_Interaction.total.intra_8-11.dat 5301 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/g.Pair_Interaction.total.intra_9-12.dat 9951 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/g.Pair_Interaction.total.pairs.dat 930 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/g_cnt.Angle.total.angles_1-2-3.dat 1240 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/g_cnt.Angle.total.angles_10-11-12.dat 868 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/g_cnt.Angle.total.angles_2-3-4.dat 992 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/g_cnt.Angle.total.angles_9-10-11.dat 806 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/g_cnt.Angle.total.angles_mid.dat 1116 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/g_cnt.BondStretch.total.bonds.dat 5890 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/g_cnt.Dihedral.total.dihedrals_1-2-3-4.dat 4960 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/g_cnt.Dihedral.total.dihedrals_2-3-4-5.dat 5890 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/g_cnt.Dihedral.total.dihedrals_8-9-10-11.dat 7130 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/g_cnt.Dihedral.total.dihedrals_9-10-11-12.dat 4650 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/g_cnt.Dihedral.total.dihedrals_mid.dat 4991 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/g_cnt.Pair_Interaction.total.intra_1-4.dat 3751 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/g_cnt.Pair_Interaction.total.intra_1-4mid.dat 4371 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/g_cnt.Pair_Interaction.total.intra_2-5.dat 4681 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/g_cnt.Pair_Interaction.total.intra_8-11.dat 5301 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/g_cnt.Pair_Interaction.total.intra_9-12.dat 9951 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/g_cnt.Pair_Interaction.total.pairs.dat 589 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/g_cnt_coeff.Dihedral.total.dihedrals_1-2-3-4.dat 496 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/g_cnt_coeff.Dihedral.total.dihedrals_2-3-4-5.dat 589 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/g_cnt_coeff.Dihedral.total.dihedrals_8-9-10-11.dat 713 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/g_cnt_coeff.Dihedral.total.dihedrals_9-10-11-12.dat 465 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/g_cnt_coeff.Dihedral.total.dihedrals_mid.dat 527 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/g_cnt_coeff.Pair_Interaction.total.intra_1-4.dat 403 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/g_cnt_coeff.Pair_Interaction.total.intra_1-4mid.dat 465 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/g_cnt_coeff.Pair_Interaction.total.intra_2-5.dat 496 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/g_cnt_coeff.Pair_Interaction.total.intra_8-11.dat 558 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/g_cnt_coeff.Pair_Interaction.total.intra_9-12.dat 1023 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/g_cnt_coeff.Pair_Interaction.total.pairs.dat 589 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/g_coeff.Dihedral.total.dihedrals_1-2-3-4.dat 496 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/g_coeff.Dihedral.total.dihedrals_2-3-4-5.dat 589 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/g_coeff.Dihedral.total.dihedrals_8-9-10-11.dat 713 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/g_coeff.Dihedral.total.dihedrals_9-10-11-12.dat 465 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/g_coeff.Dihedral.total.dihedrals_mid.dat 527 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/g_coeff.Pair_Interaction.total.intra_1-4.dat 403 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/g_coeff.Pair_Interaction.total.intra_1-4mid.dat 465 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/g_coeff.Pair_Interaction.total.intra_2-5.dat 496 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/g_coeff.Pair_Interaction.total.intra_8-11.dat 558 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/g_coeff.Pair_Interaction.total.intra_9-12.dat 1023 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/g_coeff.Pair_Interaction.total.pairs.dat 106 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/inp.txt 116077 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/log.txt 16329 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/out.total.txt 4535 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/par.txt 2068 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/qsub.sh 25 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/save.FF.dat 24713 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/save.L.dat 15810769 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/save.M.dat 15747732 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/save.M2.dat 15890776 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/save.M_cnt.dat 8 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/save.Nf.dat 24884 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/save.b_forces.dat 25444 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/save.b_struct.dat 15747732 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/save.d2M.dat 25812 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/save.d2b.dat 24766 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/save.g.dat 24465 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/save.g_cnt.dat 24465 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/save.rescale.dat 23581 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes/summarize_input.txt 0 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/ 930 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/L.Angle.total.angles_1-2-3.dat 1240 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/L.Angle.total.angles_10-11-12.dat 868 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/L.Angle.total.angles_2-3-4.dat 992 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/L.Angle.total.angles_9-10-11.dat 806 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/L.Angle.total.angles_mid.dat 1116 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/L.BondStretch.total.bonds.dat 5890 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/L.Dihedral.total.dihedrals_1-2-3-4.dat 4960 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/L.Dihedral.total.dihedrals_2-3-4-5.dat 5890 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/L.Dihedral.total.dihedrals_8-9-10-11.dat 7130 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/L.Dihedral.total.dihedrals_9-10-11-12.dat 4650 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/L.Dihedral.total.dihedrals_mid.dat 4991 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/L.Pair_Interaction.total.intra_1-4.dat 3751 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/L.Pair_Interaction.total.intra_1-4mid.dat 4371 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/L.Pair_Interaction.total.intra_2-5.dat 4681 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/L.Pair_Interaction.total.intra_8-11.dat 5301 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/L.Pair_Interaction.total.intra_9-12.dat 9951 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/L.Pair_Interaction.total.pairs.dat 589 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/L_coeff.Dihedral.total.dihedrals_1-2-3-4.dat 496 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/L_coeff.Dihedral.total.dihedrals_2-3-4-5.dat 589 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/L_coeff.Dihedral.total.dihedrals_8-9-10-11.dat 713 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/L_coeff.Dihedral.total.dihedrals_9-10-11-12.dat 465 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/L_coeff.Dihedral.total.dihedrals_mid.dat 527 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/L_coeff.Pair_Interaction.total.intra_1-4.dat 403 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/L_coeff.Pair_Interaction.total.intra_1-4mid.dat 465 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/L_coeff.Pair_Interaction.total.intra_2-5.dat 496 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/L_coeff.Pair_Interaction.total.intra_8-11.dat 558 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/L_coeff.Pair_Interaction.total.intra_9-12.dat 1023 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/L_coeff.Pair_Interaction.total.pairs.dat 3787 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/Protein_A.itp 8316 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/S.dat 8321 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/S_CONST.dat 930 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/b_forces.Angle.total.angles_1-2-3.dat 1240 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/b_forces.Angle.total.angles_10-11-12.dat 868 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/b_forces.Angle.total.angles_2-3-4.dat 992 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/b_forces.Angle.total.angles_9-10-11.dat 806 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/b_forces.Angle.total.angles_mid.dat 1116 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/b_forces.BondStretch.total.bonds.dat 5890 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/b_forces.Dihedral.total.dihedrals_1-2-3-4.dat 4960 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/b_forces.Dihedral.total.dihedrals_2-3-4-5.dat 5890 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/b_forces.Dihedral.total.dihedrals_8-9-10-11.dat 7130 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/b_forces.Dihedral.total.dihedrals_9-10-11-12.dat 4650 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/b_forces.Dihedral.total.dihedrals_mid.dat 4991 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/b_forces.Pair_Interaction.total.intra_1-4.dat 3751 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/b_forces.Pair_Interaction.total.intra_1-4mid.dat 4371 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/b_forces.Pair_Interaction.total.intra_2-5.dat 4681 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/b_forces.Pair_Interaction.total.intra_8-11.dat 5301 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/b_forces.Pair_Interaction.total.intra_9-12.dat 9951 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/b_forces.Pair_Interaction.total.pairs.dat 589 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/b_forces_coeff.Dihedral.total.dihedrals_1-2-3-4.dat 496 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/b_forces_coeff.Dihedral.total.dihedrals_2-3-4-5.dat 589 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/b_forces_coeff.Dihedral.total.dihedrals_8-9-10-11.dat 713 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/b_forces_coeff.Dihedral.total.dihedrals_9-10-11-12.dat 465 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/b_forces_coeff.Dihedral.total.dihedrals_mid.dat 527 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/b_forces_coeff.Pair_Interaction.total.intra_1-4.dat 403 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/b_forces_coeff.Pair_Interaction.total.intra_1-4mid.dat 465 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/b_forces_coeff.Pair_Interaction.total.intra_2-5.dat 496 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/b_forces_coeff.Pair_Interaction.total.intra_8-11.dat 558 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/b_forces_coeff.Pair_Interaction.total.intra_9-12.dat 1023 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/b_forces_coeff.Pair_Interaction.total.pairs.dat 930 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/b_struct.Angle.total.angles_1-2-3.dat 1240 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/b_struct.Angle.total.angles_10-11-12.dat 868 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/b_struct.Angle.total.angles_2-3-4.dat 992 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/b_struct.Angle.total.angles_9-10-11.dat 806 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/b_struct.Angle.total.angles_mid.dat 1116 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/b_struct.BondStretch.total.bonds.dat 5890 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/b_struct.Dihedral.total.dihedrals_1-2-3-4.dat 4960 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/b_struct.Dihedral.total.dihedrals_2-3-4-5.dat 5890 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/b_struct.Dihedral.total.dihedrals_8-9-10-11.dat 7130 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/b_struct.Dihedral.total.dihedrals_9-10-11-12.dat 4650 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/b_struct.Dihedral.total.dihedrals_mid.dat 4991 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/b_struct.Pair_Interaction.total.intra_1-4.dat 3751 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/b_struct.Pair_Interaction.total.intra_1-4mid.dat 4371 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/b_struct.Pair_Interaction.total.intra_2-5.dat 4681 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/b_struct.Pair_Interaction.total.intra_8-11.dat 5301 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/b_struct.Pair_Interaction.total.intra_9-12.dat 9951 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/b_struct.Pair_Interaction.total.pairs.dat 589 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/b_struct_coeff.Dihedral.total.dihedrals_1-2-3-4.dat 496 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/b_struct_coeff.Dihedral.total.dihedrals_2-3-4-5.dat 589 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/b_struct_coeff.Dihedral.total.dihedrals_8-9-10-11.dat 713 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/b_struct_coeff.Dihedral.total.dihedrals_9-10-11-12.dat 465 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/b_struct_coeff.Dihedral.total.dihedrals_mid.dat 527 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/b_struct_coeff.Pair_Interaction.total.intra_1-4.dat 403 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/b_struct_coeff.Pair_Interaction.total.intra_1-4mid.dat 465 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/b_struct_coeff.Pair_Interaction.total.intra_2-5.dat 496 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/b_struct_coeff.Pair_Interaction.total.intra_8-11.dat 558 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/b_struct_coeff.Pair_Interaction.total.intra_9-12.dat 1023 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/b_struct_coeff.Pair_Interaction.total.pairs.dat 58316 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgff-polyALA-FM_noH2O.o3935793 651 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgpolyALA_opls.gro 2091 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgpolyALA_opls.mdp 995 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgpolyALA_opls.top 5032 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgpolyALA_opls.tpr 0 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/ 0 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Emin/ 338 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Emin/Emin_Commands.txt 4268 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Emin/Protein_A.itp 609 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Emin/cgpolyALA_opls.Emin.gro 585 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Emin/cgpolyALA_opls.gro 5488 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Emin/cgpolyALA_opls.tpr 186 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Emin/index.ndx 39 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Emin/mart_polyALA_Equil_POSRES.o3936304 4826 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Emin/mart_trp_zip.Emin.mdp 995 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Emin/mart_trp_zip.top 10410 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Emin/mdout-cgpolyALA_opls.mdp 238 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Emin/qsub.sh 2102 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Emin/run_gmx.sh 145682 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Emin/table.xvg 145864 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Emin/table_A1_A4.xvg 145854 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Emin/table_A2_A5.xvg 145809 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Emin/table_A3_A6.xvg 145809 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Emin/table_A4_A7.xvg 145809 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Emin/table_A5_A8.xvg 145809 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Emin/table_A6_A9.xvg 145809 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Emin/table_A7_A10.xvg 145863 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Emin/table_A8_A11.xvg 145649 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Emin/table_A9_A12.xvg 14985 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Emin/table_a0.xvg 14977 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Emin/table_a1.xvg 14975 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Emin/table_a2.xvg 14984 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Emin/table_a3.xvg 14988 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Emin/table_a4.xvg 66469 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Emin/table_b0.xvg 29893 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Emin/table_d0.xvg 29795 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Emin/table_d1.xvg 29980 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Emin/table_d2.xvg 29829 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Emin/table_d3.xvg 30136 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Emin/table_d4.xvg 0 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Equil/ 4268 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Equil/Protein_A.itp 5488 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Equil/cgpolyALA_opls.Equil.tpr 897 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Equil/cgpolyALA_opls.confout.gro 186 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Equil/index.ndx 105 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Equil/mart_polyALA_Equil_POSRES.o3936305 4831 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Equil/mart_trp_zip.Equil.mdp 995 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Equil/mart_trp_zip.top 10412 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Equil/mdout-cgpolyALA_opls.mdp 232 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Equil/qsub.sh 2133 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Equil/run_gmx.sh 9060 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Equil/state.cpt 145682 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Equil/table.xvg 145864 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Equil/table_A1_A4.xvg 145854 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Equil/table_A2_A5.xvg 145809 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Equil/table_A3_A6.xvg 145809 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Equil/table_A4_A7.xvg 145809 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Equil/table_A5_A8.xvg 145809 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Equil/table_A6_A9.xvg 145809 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Equil/table_A7_A10.xvg 145863 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Equil/table_A8_A11.xvg 145649 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Equil/table_A9_A12.xvg 14985 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Equil/table_a0.xvg 14977 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Equil/table_a1.xvg 14975 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Equil/table_a2.xvg 14984 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Equil/table_a3.xvg 14988 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Equil/table_a4.xvg 66469 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Equil/table_b0.xvg 29893 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Equil/table_d0.xvg 29795 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Equil/table_d1.xvg 29980 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Equil/table_d2.xvg 29829 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Equil/table_d3.xvg 30136 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Equil/table_d4.xvg 0 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/ 15951 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/FESs_Rg_Q.png 4268 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/Protein_A.itp 8188384 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/Q.dat 32450059 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/Rg.xvg 13077275 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/Rg_Q_scatter.xvg 1312 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/Tick_Marks_Rg_Q_scatter.m 2090 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/Tick_Marks_Rg_Q_scatter_SJdivAA.m 1337 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/Tick_Marks_Rg_rmsd_scatter.m 2346 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/angles.xvg 1427 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/angles_1-2-3.xvg 1634 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/angles_10-11-12.xvg 1387 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/angles_2-3-4.xvg 1474 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/angles_9-10-11.xvg 1339 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/angles_mid.xvg 11381 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/bonds.xvg 6137 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/bonds_1-4.xvg 6745 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/bonds_1-4_all.xvg 6536 11-09-2014 16:51 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ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/calc_dist.sh 2136 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/calc_dist_all1-4bonds.sh 1976 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/calc_dist_all1-5bonds.sh 2058 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/calc_dist_endtypes.sh 1020 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/calc_dist_rdf.sh 5368 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/cgpolyALA_opls.3excl.tpr 4924 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/cgpolyALA_opls.4excl.tpr 897 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/cgpolyALA_opls.confout.gro 585 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/cgpolyALA_opls.gro 5488 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/cgpolyALA_opls.tpr 2829 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/dihedrals.xvg 3239 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/dihedrals_1-2-3-4.xvg 2817 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/dihedrals_2-3-4-5.xvg 3170 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/dihedrals_8-9-10-11.xvg 3308 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/dihedrals_9-10-11-12.xvg 3049 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/dihedrals_mid.xvg 10890020 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/distance.xvg 10890020 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/distance_bonds_1-4.dat.xvg 10890020 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/distance_bonds_1-4mid.dat.xvg 10890020 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/distance_bonds_2-5.dat.xvg 10890020 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/distance_bonds_3-6.dat.xvg 10890020 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/distance_bonds_4-7.dat.xvg 10890020 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/distance_bonds_5-8.dat.xvg 10890020 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/distance_bonds_6-9.dat.xvg 10890020 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/distance_bonds_7-10.dat.xvg 10890020 11-09-2014 16:51 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ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/rmsf.xvg 2119 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/run_gmx.sh 363 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/scatter.py 9056 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/state.cpt 9056 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/state_prev.cpt 145682 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/table.xvg 145864 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/table_A1_A4.xvg 145854 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/table_A2_A5.xvg 145809 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/table_A3_A6.xvg 145809 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/table_A4_A7.xvg 145809 11-09-2014 16:51 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ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/table_d4.xvg 0 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/edit/ 4991 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/edit/f_1-4.dat 3751 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/edit/f_1-4mid.dat 4371 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/edit/f_2-5.dat 4681 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/edit/f_8-11.dat 5301 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/edit/f_9-12.dat 930 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/edit/f_angle_1-2-3.dat 1240 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/edit/f_angle_10-11-12.dat 868 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/edit/f_angle_2-3-4.dat 992 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/edit/f_angle_9-10-11.dat 806 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/edit/f_angle_mid.dat 1116 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/edit/f_bond.dat 9724 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/edit/f_dih_1-2-3-4.dat 9628 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/edit/f_dih_2-3-4-5.dat 9722 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/edit/f_dih_8-9-10-11.dat 10024 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/edit/f_dih_9-10-11-12.dat 9660 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/edit/f_dih_mid.dat 930 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/edit/f_forces.Angle.total.angles_1-2-3.dat 1240 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/edit/f_forces.Angle.total.angles_10-11-12.dat 868 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/edit/f_forces.Angle.total.angles_2-3-4.dat 992 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/edit/f_forces.Angle.total.angles_9-10-11.dat 806 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/edit/f_forces.Angle.total.angles_mid.dat 1116 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/edit/f_forces.BondStretch.total.bonds.dat 4991 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/edit/f_forces.Pair_Interaction.total.intra_1-4.dat 3751 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/edit/f_forces.Pair_Interaction.total.intra_1-4mid.dat 4371 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/edit/f_forces.Pair_Interaction.total.intra_2-5.dat 4681 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/edit/f_forces.Pair_Interaction.total.intra_8-11.dat 5301 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/edit/f_forces.Pair_Interaction.total.intra_9-12.dat 9951 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/edit/f_forces.Pair_Interaction.total.pairs.dat 9951 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/edit/f_pairs.dat 2205 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/edit/run.make_gmx4_table.sh 145682 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/edit/table.xvg 145809 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/edit/table_1-4mid.xvg 145864 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/edit/table_A1_A4.xvg 145854 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/edit/table_A2_A5.xvg 145863 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/edit/table_A8_A11.xvg 145649 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/edit/table_A9_A12.xvg 14985 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/edit/table_a0.xvg 14977 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/edit/table_a1.xvg 14975 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/edit/table_a2.xvg 14984 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/edit/table_a3.xvg 14988 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/edit/table_a4.xvg 66469 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/edit/table_b0.xvg 29893 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/edit/table_d0.xvg 29795 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/edit/table_d1.xvg 29980 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/edit/table_d2.xvg 29829 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/edit/table_d3.xvg 30136 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/edit/table_d4.xvg 930 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/f_forces.Angle.total.angles_1-2-3.dat 1240 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/f_forces.Angle.total.angles_10-11-12.dat 868 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/f_forces.Angle.total.angles_2-3-4.dat 992 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/f_forces.Angle.total.angles_9-10-11.dat 806 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/f_forces.Angle.total.angles_mid.dat 1116 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/f_forces.BondStretch.total.bonds.dat 5890 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/f_forces.Dihedral.total.dihedrals_1-2-3-4.dat 4960 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/f_forces.Dihedral.total.dihedrals_2-3-4-5.dat 5890 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/f_forces.Dihedral.total.dihedrals_8-9-10-11.dat 7130 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/f_forces.Dihedral.total.dihedrals_9-10-11-12.dat 4650 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/f_forces.Dihedral.total.dihedrals_mid.dat 4991 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/f_forces.Pair_Interaction.total.intra_1-4.dat 3751 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/f_forces.Pair_Interaction.total.intra_1-4mid.dat 4371 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/f_forces.Pair_Interaction.total.intra_2-5.dat 4681 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/f_forces.Pair_Interaction.total.intra_8-11.dat 5301 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/f_forces.Pair_Interaction.total.intra_9-12.dat 9951 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/f_forces.Pair_Interaction.total.pairs.dat 589 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/f_forces_coeff.Dihedral.total.dihedrals_1-2-3-4.dat 496 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/f_forces_coeff.Dihedral.total.dihedrals_2-3-4-5.dat 589 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/f_forces_coeff.Dihedral.total.dihedrals_8-9-10-11.dat 713 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/f_forces_coeff.Dihedral.total.dihedrals_9-10-11-12.dat 465 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/f_forces_coeff.Dihedral.total.dihedrals_mid.dat 527 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/f_forces_coeff.Pair_Interaction.total.intra_1-4.dat 403 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/f_forces_coeff.Pair_Interaction.total.intra_1-4mid.dat 465 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/f_forces_coeff.Pair_Interaction.total.intra_2-5.dat 496 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/f_forces_coeff.Pair_Interaction.total.intra_8-11.dat 558 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/f_forces_coeff.Pair_Interaction.total.intra_9-12.dat 1023 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/f_forces_coeff.Pair_Interaction.total.pairs.dat 930 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/f_struct.Angle.total.angles_1-2-3.dat 1240 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/f_struct.Angle.total.angles_10-11-12.dat 868 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/f_struct.Angle.total.angles_2-3-4.dat 992 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/f_struct.Angle.total.angles_9-10-11.dat 806 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/f_struct.Angle.total.angles_mid.dat 1116 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/f_struct.BondStretch.total.bonds.dat 5890 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/f_struct.Dihedral.total.dihedrals_1-2-3-4.dat 4960 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/f_struct.Dihedral.total.dihedrals_2-3-4-5.dat 5890 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/f_struct.Dihedral.total.dihedrals_8-9-10-11.dat 7130 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/f_struct.Dihedral.total.dihedrals_9-10-11-12.dat 4650 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/f_struct.Dihedral.total.dihedrals_mid.dat 4991 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/f_struct.Pair_Interaction.total.intra_1-4.dat 3751 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/f_struct.Pair_Interaction.total.intra_1-4mid.dat 4371 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/f_struct.Pair_Interaction.total.intra_2-5.dat 4681 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/f_struct.Pair_Interaction.total.intra_8-11.dat 5301 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/f_struct.Pair_Interaction.total.intra_9-12.dat 9951 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/f_struct.Pair_Interaction.total.pairs.dat 589 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/f_struct_coeff.Dihedral.total.dihedrals_1-2-3-4.dat 496 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/f_struct_coeff.Dihedral.total.dihedrals_2-3-4-5.dat 589 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/f_struct_coeff.Dihedral.total.dihedrals_8-9-10-11.dat 713 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/f_struct_coeff.Dihedral.total.dihedrals_9-10-11-12.dat 465 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/f_struct_coeff.Dihedral.total.dihedrals_mid.dat 527 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/f_struct_coeff.Pair_Interaction.total.intra_1-4.dat 403 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/f_struct_coeff.Pair_Interaction.total.intra_1-4mid.dat 465 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/f_struct_coeff.Pair_Interaction.total.intra_2-5.dat 496 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/f_struct_coeff.Pair_Interaction.total.intra_8-11.dat 558 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/f_struct_coeff.Pair_Interaction.total.intra_9-12.dat 1023 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/f_struct_coeff.Pair_Interaction.total.pairs.dat 930 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/g.Angle.total.angles_1-2-3.dat 1240 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/g.Angle.total.angles_10-11-12.dat 868 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/g.Angle.total.angles_2-3-4.dat 992 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/g.Angle.total.angles_9-10-11.dat 806 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/g.Angle.total.angles_mid.dat 1116 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/g.BondStretch.total.bonds.dat 5890 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/g.Dihedral.total.dihedrals_1-2-3-4.dat 4960 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/g.Dihedral.total.dihedrals_2-3-4-5.dat 5890 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/g.Dihedral.total.dihedrals_8-9-10-11.dat 7130 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/g.Dihedral.total.dihedrals_9-10-11-12.dat 4650 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/g.Dihedral.total.dihedrals_mid.dat 4991 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/g.Pair_Interaction.total.intra_1-4.dat 3751 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/g.Pair_Interaction.total.intra_1-4mid.dat 4371 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/g.Pair_Interaction.total.intra_2-5.dat 4681 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/g.Pair_Interaction.total.intra_8-11.dat 5301 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/g.Pair_Interaction.total.intra_9-12.dat 9951 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/g.Pair_Interaction.total.pairs.dat 930 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/g_cnt.Angle.total.angles_1-2-3.dat 1240 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/g_cnt.Angle.total.angles_10-11-12.dat 868 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/g_cnt.Angle.total.angles_2-3-4.dat 992 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/g_cnt.Angle.total.angles_9-10-11.dat 806 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/g_cnt.Angle.total.angles_mid.dat 1116 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/g_cnt.BondStretch.total.bonds.dat 5890 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/g_cnt.Dihedral.total.dihedrals_1-2-3-4.dat 4960 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/g_cnt.Dihedral.total.dihedrals_2-3-4-5.dat 5890 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/g_cnt.Dihedral.total.dihedrals_8-9-10-11.dat 7130 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/g_cnt.Dihedral.total.dihedrals_9-10-11-12.dat 4650 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/g_cnt.Dihedral.total.dihedrals_mid.dat 4991 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/g_cnt.Pair_Interaction.total.intra_1-4.dat 3751 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/g_cnt.Pair_Interaction.total.intra_1-4mid.dat 4371 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/g_cnt.Pair_Interaction.total.intra_2-5.dat 4681 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/g_cnt.Pair_Interaction.total.intra_8-11.dat 5301 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/g_cnt.Pair_Interaction.total.intra_9-12.dat 9951 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/g_cnt.Pair_Interaction.total.pairs.dat 589 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/g_cnt_coeff.Dihedral.total.dihedrals_1-2-3-4.dat 496 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/g_cnt_coeff.Dihedral.total.dihedrals_2-3-4-5.dat 589 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/g_cnt_coeff.Dihedral.total.dihedrals_8-9-10-11.dat 713 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/g_cnt_coeff.Dihedral.total.dihedrals_9-10-11-12.dat 465 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/g_cnt_coeff.Dihedral.total.dihedrals_mid.dat 527 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/g_cnt_coeff.Pair_Interaction.total.intra_1-4.dat 403 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/g_cnt_coeff.Pair_Interaction.total.intra_1-4mid.dat 465 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/g_cnt_coeff.Pair_Interaction.total.intra_2-5.dat 496 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/g_cnt_coeff.Pair_Interaction.total.intra_8-11.dat 558 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/g_cnt_coeff.Pair_Interaction.total.intra_9-12.dat 1023 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/g_cnt_coeff.Pair_Interaction.total.pairs.dat 589 11-09-2014 16:51 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/g_coeff.Dihedral.total.dihedrals_1-2-3-4.dat 496 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/g_coeff.Dihedral.total.dihedrals_2-3-4-5.dat 589 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/g_coeff.Dihedral.total.dihedrals_8-9-10-11.dat 713 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/g_coeff.Dihedral.total.dihedrals_9-10-11-12.dat 465 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/g_coeff.Dihedral.total.dihedrals_mid.dat 527 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/g_coeff.Pair_Interaction.total.intra_1-4.dat 403 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/g_coeff.Pair_Interaction.total.intra_1-4mid.dat 465 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/g_coeff.Pair_Interaction.total.intra_2-5.dat 496 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/g_coeff.Pair_Interaction.total.intra_8-11.dat 558 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/g_coeff.Pair_Interaction.total.intra_9-12.dat 1023 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/g_coeff.Pair_Interaction.total.pairs.dat 106 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/inp.txt 116365 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/log.txt 16336 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/out.total.txt 4585 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/par.txt 2068 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/qsub.sh 25 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/save.FF.dat 24713 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/save.L.dat 15810769 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/save.M.dat 15747732 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/save.M2.dat 15890776 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/save.M_cnt.dat 8 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/save.Nf.dat 24884 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/save.b_forces.dat 25444 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/save.b_struct.dat 15747732 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/save.d2M.dat 25812 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/save.d2b.dat 24766 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/save.g.dat 24465 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/save.g_cnt.dat 24465 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/save.rescale.dat 24013 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_1-4_allendtypes_CONSTdist_REGnb/summarize_input.txt 0 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/ 930 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/L.Angle.total.angles_1-2-3.dat 1240 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/L.Angle.total.angles_10-11-12.dat 868 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/L.Angle.total.angles_2-3-4.dat 992 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/L.Angle.total.angles_9-10-11.dat 806 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/L.Angle.total.angles_mid.dat 1116 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/L.BondStretch.total.bonds.dat 5890 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/L.Dihedral.total.dihedrals_1-2-3-4.dat 4960 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/L.Dihedral.total.dihedrals_2-3-4-5.dat 5890 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/L.Dihedral.total.dihedrals_8-9-10-11.dat 7130 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/L.Dihedral.total.dihedrals_9-10-11-12.dat 4650 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/L.Dihedral.total.dihedrals_mid.dat 11811 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/L.Pair_Interaction.total.pairs.dat 589 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/L_coeff.Dihedral.total.dihedrals_1-2-3-4.dat 496 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/L_coeff.Dihedral.total.dihedrals_2-3-4-5.dat 589 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/L_coeff.Dihedral.total.dihedrals_8-9-10-11.dat 713 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/L_coeff.Dihedral.total.dihedrals_9-10-11-12.dat 465 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/L_coeff.Dihedral.total.dihedrals_mid.dat 1209 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/L_coeff.Pair_Interaction.total.pairs.dat 3787 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/Protein_A.itp 6783 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/S.dat 930 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/b_forces.Angle.total.angles_1-2-3.dat 1240 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/b_forces.Angle.total.angles_10-11-12.dat 868 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/b_forces.Angle.total.angles_2-3-4.dat 992 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/b_forces.Angle.total.angles_9-10-11.dat 806 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/b_forces.Angle.total.angles_mid.dat 1116 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/b_forces.BondStretch.total.bonds.dat 5890 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/b_forces.Dihedral.total.dihedrals_1-2-3-4.dat 4960 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/b_forces.Dihedral.total.dihedrals_2-3-4-5.dat 5890 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/b_forces.Dihedral.total.dihedrals_8-9-10-11.dat 7130 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/b_forces.Dihedral.total.dihedrals_9-10-11-12.dat 4650 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/b_forces.Dihedral.total.dihedrals_mid.dat 11811 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/b_forces.Pair_Interaction.total.pairs.dat 589 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/b_forces_coeff.Dihedral.total.dihedrals_1-2-3-4.dat 496 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/b_forces_coeff.Dihedral.total.dihedrals_2-3-4-5.dat 589 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/b_forces_coeff.Dihedral.total.dihedrals_8-9-10-11.dat 713 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/b_forces_coeff.Dihedral.total.dihedrals_9-10-11-12.dat 465 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/b_forces_coeff.Dihedral.total.dihedrals_mid.dat 1209 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/b_forces_coeff.Pair_Interaction.total.pairs.dat 930 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/b_struct.Angle.total.angles_1-2-3.dat 1240 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/b_struct.Angle.total.angles_10-11-12.dat 868 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/b_struct.Angle.total.angles_2-3-4.dat 992 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/b_struct.Angle.total.angles_9-10-11.dat 806 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/b_struct.Angle.total.angles_mid.dat 1116 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/b_struct.BondStretch.total.bonds.dat 5890 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/b_struct.Dihedral.total.dihedrals_1-2-3-4.dat 4960 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/b_struct.Dihedral.total.dihedrals_2-3-4-5.dat 5890 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/b_struct.Dihedral.total.dihedrals_8-9-10-11.dat 7130 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/b_struct.Dihedral.total.dihedrals_9-10-11-12.dat 4650 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/b_struct.Dihedral.total.dihedrals_mid.dat 11811 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/b_struct.Pair_Interaction.total.pairs.dat 589 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/b_struct_coeff.Dihedral.total.dihedrals_1-2-3-4.dat 496 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/b_struct_coeff.Dihedral.total.dihedrals_2-3-4-5.dat 589 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/b_struct_coeff.Dihedral.total.dihedrals_8-9-10-11.dat 713 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/b_struct_coeff.Dihedral.total.dihedrals_9-10-11-12.dat 465 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/b_struct_coeff.Dihedral.total.dihedrals_mid.dat 1209 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/b_struct_coeff.Pair_Interaction.total.pairs.dat 58316 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgff-polyALA-FM_noH2O.o3935030 651 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgpolyALA_opls.gro 2091 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgpolyALA_opls.mdp 995 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgpolyALA_opls.top 5032 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgpolyALA_opls.tpr 0 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/ 0 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Emin/ 338 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Emin/Emin_Commands.txt 4268 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Emin/Protein_A.itp 609 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Emin/cgpolyALA_opls.Emin.gro 585 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Emin/cgpolyALA_opls.gro 4980 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Emin/cgpolyALA_opls.tpr 186 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Emin/index.ndx 38 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Emin/mart_polyALA_Equil_POSRES.o3935581 4827 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Emin/mart_trp_zip.Emin.mdp 995 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Emin/mart_trp_zip.top 10323 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Emin/mdout-cgpolyALA_opls.mdp 238 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Emin/qsub.sh 2099 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Emin/run_gmx.sh 146014 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Emin/table.xvg 14983 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Emin/table_a0.xvg 14976 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Emin/table_a1.xvg 14977 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Emin/table_a2.xvg 14979 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Emin/table_a3.xvg 14985 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Emin/table_a4.xvg 66468 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Emin/table_b0.xvg 29852 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Emin/table_d0.xvg 29887 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Emin/table_d1.xvg 29939 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Emin/table_d2.xvg 29940 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Emin/table_d3.xvg 29823 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Emin/table_d4.xvg 0 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Equil/ 4268 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Equil/Protein_A.itp 4980 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Equil/cgpolyALA_opls.Equil.tpr 897 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Equil/cgpolyALA_opls.confout.gro 186 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Equil/index.ndx 107 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Equil/mart_polyALA_Equil_POSRES.o3935583 4832 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Equil/mart_trp_zip.Equil.mdp 995 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Equil/mart_trp_zip.top 10325 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Equil/mdout-cgpolyALA_opls.mdp 232 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Equil/qsub.sh 2130 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Equil/run_gmx.sh 5316 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Equil/state.cpt 146014 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Equil/table.xvg 14983 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Equil/table_a0.xvg 14976 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Equil/table_a1.xvg 14977 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Equil/table_a2.xvg 14979 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Equil/table_a3.xvg 14985 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Equil/table_a4.xvg 66468 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Equil/table_b0.xvg 29852 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Equil/table_d0.xvg 29887 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Equil/table_d1.xvg 29939 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Equil/table_d2.xvg 29940 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Equil/table_d3.xvg 29823 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Equil/table_d4.xvg 0 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Prod_run/ 4268 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Prod_run/Protein_A.itp 32450661 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Prod_run/Rg.xvg 1307 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Prod_run/Tick_Marks_Rg_Q_scatter.m 1855 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Prod_run/Tick_Marks_Rg_Q_scatter_SJdivAA.m 1337 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Prod_run/Tick_Marks_Rg_rmsd_scatter.m 2300 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Prod_run/angles.xvg 1427 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Prod_run/angles_1-2-3.xvg 1612 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Prod_run/angles_10-11-12.xvg 1349 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Prod_run/angles_2-3-4.xvg 1435 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Prod_run/angles_9-10-11.xvg 1375 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Prod_run/angles_mid.xvg 11533 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Prod_run/bonds.xvg 6346 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Prod_run/bonds_1-4.xvg 6859 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Prod_run/bonds_1-4_all.xvg 6251 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Prod_run/bonds_1-4mid.xvg 9690 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Prod_run/bonds_1-5_all.xvg 6213 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Prod_run/bonds_2-5.xvg 5681 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Prod_run/bonds_3-6.xvg 6118 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Prod_run/bonds_4-7.xvg 5491 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Prod_run/bonds_5-8.xvg 5548 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Prod_run/bonds_6-9.xvg 5757 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Prod_run/bonds_7-10.xvg 6802 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Prod_run/bonds_8-11.xvg 6460 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Prod_run/bonds_9-12.xvg 1871 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Prod_run/calc_dist.sh 2136 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Prod_run/calc_dist_all1-4bonds.sh 1976 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Prod_run/calc_dist_all1-5bonds.sh 2058 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Prod_run/calc_dist_endtypes.sh 1020 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Prod_run/calc_dist_rdf.sh 5368 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Prod_run/cgpolyALA_opls.3excl.tpr 4924 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Prod_run/cgpolyALA_opls.4excl.tpr 897 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Prod_run/cgpolyALA_opls.confout.gro 585 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Prod_run/cgpolyALA_opls.gro 4980 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Prod_run/cgpolyALA_opls.tpr 2990 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Prod_run/dihedrals.xvg 3124 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Prod_run/dihedrals_1-2-3-4.xvg 2964 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Prod_run/dihedrals_2-3-4-5.xvg 3411 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Prod_run/dihedrals_8-9-10-11.xvg 3593 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Prod_run/dihedrals_9-10-11-12.xvg 2840 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Prod_run/dihedrals_mid.xvg 10890020 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Prod_run/distance.xvg 10890020 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Prod_run/distance_bonds_1-4.dat.xvg 10890020 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Prod_run/distance_bonds_1-4mid.dat.xvg 10890020 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Prod_run/distance_bonds_2-5.dat.xvg 10890020 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/cgsim/Prod_run/distance_bonds_3-6.dat.xvg 10890020 11-09-2014 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1116 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/edit/f_bond.dat 9717 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/edit/f_dih_1-2-3-4.dat 9684 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/edit/f_dih_2-3-4-5.dat 9576 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/edit/f_dih_8-9-10-11.dat 9701 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/edit/f_dih_9-10-11-12.dat 9416 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/edit/f_dih_mid.dat 930 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/edit/f_forces.Angle.total.angles_1-2-3.dat 1240 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/edit/f_forces.Angle.total.angles_10-11-12.dat 868 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/edit/f_forces.Angle.total.angles_2-3-4.dat 992 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/edit/f_forces.Angle.total.angles_9-10-11.dat 806 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/edit/f_forces.Angle.total.angles_mid.dat 1116 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/edit/f_forces.BondStretch.total.bonds.dat 11811 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11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/edit/table_d3.xvg 29823 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/edit/table_d4.xvg 930 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/f_forces.Angle.total.angles_1-2-3.dat 1240 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/f_forces.Angle.total.angles_10-11-12.dat 868 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/f_forces.Angle.total.angles_2-3-4.dat 992 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/f_forces.Angle.total.angles_9-10-11.dat 806 11-09-2014 16:52 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11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/f_struct.Angle.total.angles_9-10-11.dat 806 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/f_struct.Angle.total.angles_mid.dat 1116 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/f_struct.BondStretch.total.bonds.dat 5890 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/f_struct.Dihedral.total.dihedrals_1-2-3-4.dat 4960 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/f_struct.Dihedral.total.dihedrals_2-3-4-5.dat 5890 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/f_struct.Dihedral.total.dihedrals_8-9-10-11.dat 7130 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/f_struct.Dihedral.total.dihedrals_9-10-11-12.dat 4650 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/f_struct.Dihedral.total.dihedrals_mid.dat 11811 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/f_struct.Pair_Interaction.total.pairs.dat 589 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/f_struct_coeff.Dihedral.total.dihedrals_1-2-3-4.dat 496 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/f_struct_coeff.Dihedral.total.dihedrals_2-3-4-5.dat 589 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/f_struct_coeff.Dihedral.total.dihedrals_8-9-10-11.dat 713 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/f_struct_coeff.Dihedral.total.dihedrals_9-10-11-12.dat 465 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/f_struct_coeff.Dihedral.total.dihedrals_mid.dat 1209 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/f_struct_coeff.Pair_Interaction.total.pairs.dat 930 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/g.Angle.total.angles_1-2-3.dat 1240 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/g.Angle.total.angles_10-11-12.dat 868 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/g.Angle.total.angles_2-3-4.dat 992 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/g.Angle.total.angles_9-10-11.dat 806 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/g.Angle.total.angles_mid.dat 1116 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/g.BondStretch.total.bonds.dat 5890 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/g.Dihedral.total.dihedrals_1-2-3-4.dat 4960 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/g.Dihedral.total.dihedrals_2-3-4-5.dat 5890 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/g.Dihedral.total.dihedrals_8-9-10-11.dat 7130 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/g.Dihedral.total.dihedrals_9-10-11-12.dat 4650 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/g.Dihedral.total.dihedrals_mid.dat 11811 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/g.Pair_Interaction.total.pairs.dat 930 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/g_cnt.Angle.total.angles_1-2-3.dat 1240 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/g_cnt.Angle.total.angles_10-11-12.dat 868 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/g_cnt.Angle.total.angles_2-3-4.dat 992 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/g_cnt.Angle.total.angles_9-10-11.dat 806 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/g_cnt.Angle.total.angles_mid.dat 1116 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/g_cnt.BondStretch.total.bonds.dat 5890 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/g_cnt.Dihedral.total.dihedrals_1-2-3-4.dat 4960 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/g_cnt.Dihedral.total.dihedrals_2-3-4-5.dat 5890 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/g_cnt.Dihedral.total.dihedrals_8-9-10-11.dat 7130 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/g_cnt.Dihedral.total.dihedrals_9-10-11-12.dat 4650 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/g_cnt.Dihedral.total.dihedrals_mid.dat 11811 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/g_cnt.Pair_Interaction.total.pairs.dat 589 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/g_cnt_coeff.Dihedral.total.dihedrals_1-2-3-4.dat 496 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/g_cnt_coeff.Dihedral.total.dihedrals_2-3-4-5.dat 589 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/g_cnt_coeff.Dihedral.total.dihedrals_8-9-10-11.dat 713 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/g_cnt_coeff.Dihedral.total.dihedrals_9-10-11-12.dat 465 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/g_cnt_coeff.Dihedral.total.dihedrals_mid.dat 1209 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/g_cnt_coeff.Pair_Interaction.total.pairs.dat 589 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/g_coeff.Dihedral.total.dihedrals_1-2-3-4.dat 496 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/g_coeff.Dihedral.total.dihedrals_2-3-4-5.dat 589 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/g_coeff.Dihedral.total.dihedrals_8-9-10-11.dat 713 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/g_coeff.Dihedral.total.dihedrals_9-10-11-12.dat 465 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/g_coeff.Dihedral.total.dihedrals_mid.dat 1209 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/g_coeff.Pair_Interaction.total.pairs.dat 106 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/inp.txt 93306 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/log.txt 10414 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/out.total.txt 4540 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/par.txt 2068 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/qsub.sh 25 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/save.FF.dat 19868 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/save.L.dat 10173597 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/save.M.dat 10127532 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/save.M2.dat 10229530 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/save.M_cnt.dat 8 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/save.Nf.dat 19948 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/save.b_forces.dat 20391 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/save.b_struct.dat 10127532 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/save.d2M.dat 20807 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/save.d2b.dat 19873 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/save.g.dat 19625 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/save.g_cnt.dat 19625 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/save.rescale.dat 22300 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes/summarize_input.txt 0 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/ 930 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/L.Angle.total.angles_1-2-3.dat 1240 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/L.Angle.total.angles_10-11-12.dat 868 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/L.Angle.total.angles_2-3-4.dat 992 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/L.Angle.total.angles_9-10-11.dat 806 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/L.Angle.total.angles_mid.dat 1116 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/L.BondStretch.total.bonds.dat 5890 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/L.Dihedral.total.dihedrals_1-2-3-4.dat 4960 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/L.Dihedral.total.dihedrals_2-3-4-5.dat 5890 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/L.Dihedral.total.dihedrals_8-9-10-11.dat 7130 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/L.Dihedral.total.dihedrals_9-10-11-12.dat 4650 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/L.Dihedral.total.dihedrals_mid.dat 11811 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/L.Pair_Interaction.total.pairs.dat 589 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/L_coeff.Dihedral.total.dihedrals_1-2-3-4.dat 496 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/L_coeff.Dihedral.total.dihedrals_2-3-4-5.dat 589 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/L_coeff.Dihedral.total.dihedrals_8-9-10-11.dat 713 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/L_coeff.Dihedral.total.dihedrals_9-10-11-12.dat 465 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/L_coeff.Dihedral.total.dihedrals_mid.dat 1209 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/L_coeff.Pair_Interaction.total.pairs.dat 3787 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/Protein_A.itp 6783 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/S.dat 6788 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/S_CONST.dat 930 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/b_forces.Angle.total.angles_1-2-3.dat 1240 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/b_forces.Angle.total.angles_10-11-12.dat 868 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/b_forces.Angle.total.angles_2-3-4.dat 992 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/b_forces.Angle.total.angles_9-10-11.dat 806 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/b_forces.Angle.total.angles_mid.dat 1116 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/b_forces.BondStretch.total.bonds.dat 5890 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/b_forces.Dihedral.total.dihedrals_1-2-3-4.dat 4960 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/b_forces.Dihedral.total.dihedrals_2-3-4-5.dat 5890 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/b_forces.Dihedral.total.dihedrals_8-9-10-11.dat 7130 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/b_forces.Dihedral.total.dihedrals_9-10-11-12.dat 4650 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/b_forces.Dihedral.total.dihedrals_mid.dat 11811 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/b_forces.Pair_Interaction.total.pairs.dat 589 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/b_forces_coeff.Dihedral.total.dihedrals_1-2-3-4.dat 496 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/b_forces_coeff.Dihedral.total.dihedrals_2-3-4-5.dat 589 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/b_forces_coeff.Dihedral.total.dihedrals_8-9-10-11.dat 713 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/b_forces_coeff.Dihedral.total.dihedrals_9-10-11-12.dat 465 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/b_forces_coeff.Dihedral.total.dihedrals_mid.dat 1209 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/b_forces_coeff.Pair_Interaction.total.pairs.dat 930 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/b_struct.Angle.total.angles_1-2-3.dat 1240 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/b_struct.Angle.total.angles_10-11-12.dat 868 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/b_struct.Angle.total.angles_2-3-4.dat 992 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/b_struct.Angle.total.angles_9-10-11.dat 806 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/b_struct.Angle.total.angles_mid.dat 1116 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/b_struct.BondStretch.total.bonds.dat 5890 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/b_struct.Dihedral.total.dihedrals_1-2-3-4.dat 4960 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/b_struct.Dihedral.total.dihedrals_2-3-4-5.dat 5890 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/b_struct.Dihedral.total.dihedrals_8-9-10-11.dat 7130 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/b_struct.Dihedral.total.dihedrals_9-10-11-12.dat 4650 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/b_struct.Dihedral.total.dihedrals_mid.dat 11811 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/b_struct.Pair_Interaction.total.pairs.dat 589 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/b_struct_coeff.Dihedral.total.dihedrals_1-2-3-4.dat 496 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/b_struct_coeff.Dihedral.total.dihedrals_2-3-4-5.dat 589 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/b_struct_coeff.Dihedral.total.dihedrals_8-9-10-11.dat 713 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/b_struct_coeff.Dihedral.total.dihedrals_9-10-11-12.dat 465 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/b_struct_coeff.Dihedral.total.dihedrals_mid.dat 1209 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/b_struct_coeff.Pair_Interaction.total.pairs.dat 58316 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgff-polyALA-FM_noH2O.o3937935 651 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgpolyALA_opls.gro 2091 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgpolyALA_opls.mdp 995 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgpolyALA_opls.top 5032 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgpolyALA_opls.tpr 0 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/ 0 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Emin/ 338 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Emin/Emin_Commands.txt 4268 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Emin/Protein_A.itp 609 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Emin/cgpolyALA_opls.Emin.gro 585 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Emin/cgpolyALA_opls.gro 4980 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Emin/cgpolyALA_opls.tpr 186 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Emin/index.ndx 38 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Emin/mart_polyALA_Equil_POSRES.o3938478 4827 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Emin/mart_trp_zip.Emin.mdp 995 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Emin/mart_trp_zip.top 10323 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Emin/mdout-cgpolyALA_opls.mdp 238 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Emin/qsub.sh 2099 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Emin/run_gmx.sh 146024 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Emin/table.xvg 14983 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Emin/table_a0.xvg 14976 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Emin/table_a1.xvg 14977 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Emin/table_a2.xvg 14979 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Emin/table_a3.xvg 14985 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Emin/table_a4.xvg 66468 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Emin/table_b0.xvg 29789 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Emin/table_d0.xvg 29816 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Emin/table_d1.xvg 29921 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Emin/table_d2.xvg 29882 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Emin/table_d3.xvg 29790 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Emin/table_d4.xvg 0 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Equil/ 4268 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Equil/Protein_A.itp 4980 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Equil/cgpolyALA_opls.Equil.tpr 897 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Equil/cgpolyALA_opls.confout.gro 186 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Equil/index.ndx 106 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Equil/mart_polyALA_Equil_POSRES.o3938479 4832 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Equil/mart_trp_zip.Equil.mdp 995 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Equil/mart_trp_zip.top 10325 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Equil/mdout-cgpolyALA_opls.mdp 232 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Equil/qsub.sh 2130 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Equil/run_gmx.sh 5316 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Equil/state.cpt 146024 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Equil/table.xvg 14983 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Equil/table_a0.xvg 14976 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Equil/table_a1.xvg 14977 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Equil/table_a2.xvg 14979 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Equil/table_a3.xvg 14985 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Equil/table_a4.xvg 66468 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Equil/table_b0.xvg 29789 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Equil/table_d0.xvg 29816 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Equil/table_d1.xvg 29921 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Equil/table_d2.xvg 29882 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Equil/table_d3.xvg 29790 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Equil/table_d4.xvg 0 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/ 17609 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/FESs_Rg_Q.png 4268 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/Protein_A.itp 8188999 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/Q.dat 32450059 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/Rg.xvg 13077827 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/Rg_Q_scatter.xvg 7 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/SJD.dat 1312 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/Tick_Marks_Rg_Q_scatter.m 2090 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/Tick_Marks_Rg_Q_scatter_SJdivAA.m 1337 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/Tick_Marks_Rg_rmsd_scatter.m 2231 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/angles.xvg 1418 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/angles_1-2-3.xvg 1622 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/angles_10-11-12.xvg 1349 11-09-2014 16:52 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1871 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/calc_dist.sh 2136 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/calc_dist_all1-4bonds.sh 1976 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/calc_dist_all1-5bonds.sh 2058 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/calc_dist_endtypes.sh 1020 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/calc_dist_rdf.sh 5368 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/cgpolyALA_opls.3excl.tpr 4924 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/cgpolyALA_opls.4excl.tpr 897 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/cgpolyALA_opls.confout.gro 585 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/cgpolyALA_opls.gro 4980 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/cgpolyALA_opls.tpr 2783 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/dihedrals.xvg 2739 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/dihedrals_1-2-3-4.xvg 2489 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/dihedrals_2-3-4-5.xvg 2938 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/dihedrals_8-9-10-11.xvg 3482 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/dihedrals_9-10-11-12.xvg 2527 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/dihedrals_mid.xvg 10890020 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/distance.xvg 10890020 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/distance_bonds_1-4.dat.xvg 10890020 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/distance_bonds_1-4mid.dat.xvg 10890020 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/distance_bonds_2-5.dat.xvg 10890020 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/distance_bonds_3-6.dat.xvg 10890020 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/distance_bonds_4-7.dat.xvg 10890020 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/distance_bonds_5-8.dat.xvg 10890020 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/distance_bonds_6-9.dat.xvg 10890020 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/distance_bonds_7-10.dat.xvg 10890020 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/distance_bonds_8-11.dat.xvg 10890020 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/distance_bonds_9-12.dat.xvg 2049 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/helicity.py 186 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/index.ndx 558 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/index_dist.ndx 524 11-09-2014 16:52 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2116 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/run_gmx.sh 363 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/scatter.py 5312 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/state.cpt 5312 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/state_prev.cpt 146024 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/table.xvg 14983 11-09-2014 16:52 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29789 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/table_d0.xvg 29816 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/table_d1.xvg 29921 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/table_d2.xvg 29882 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/table_d3.xvg 29790 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/cgsim/Prod_run/table_d4.xvg 0 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/edit/ 930 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16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/edit/f_forces.Angle.total.angles_10-11-12.dat 868 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/edit/f_forces.Angle.total.angles_2-3-4.dat 992 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/edit/f_forces.Angle.total.angles_9-10-11.dat 806 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/edit/f_forces.Angle.total.angles_mid.dat 1116 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/edit/f_forces.BondStretch.total.bonds.dat 11811 11-09-2014 16:52 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ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/edit/table_a2.xvg 14979 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/edit/table_a3.xvg 14985 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/edit/table_a4.xvg 66468 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/edit/table_b0.xvg 29789 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/edit/table_d0.xvg 29816 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/edit/table_d1.xvg 29921 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/edit/table_d2.xvg 29882 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/edit/table_d3.xvg 29790 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/edit/table_d4.xvg 930 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/f_forces.Angle.total.angles_1-2-3.dat 1240 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/f_forces.Angle.total.angles_10-11-12.dat 868 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/f_forces.Angle.total.angles_2-3-4.dat 992 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/f_forces.Angle.total.angles_9-10-11.dat 806 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/f_forces.Angle.total.angles_mid.dat 1116 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/f_forces.BondStretch.total.bonds.dat 5890 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/f_forces.Dihedral.total.dihedrals_1-2-3-4.dat 4960 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/f_forces.Dihedral.total.dihedrals_2-3-4-5.dat 5890 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/f_forces.Dihedral.total.dihedrals_8-9-10-11.dat 7130 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/f_forces.Dihedral.total.dihedrals_9-10-11-12.dat 4650 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/f_forces.Dihedral.total.dihedrals_mid.dat 11811 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/f_forces.Pair_Interaction.total.pairs.dat 589 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/f_forces_coeff.Dihedral.total.dihedrals_1-2-3-4.dat 496 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/f_forces_coeff.Dihedral.total.dihedrals_2-3-4-5.dat 589 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/f_forces_coeff.Dihedral.total.dihedrals_8-9-10-11.dat 713 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/f_forces_coeff.Dihedral.total.dihedrals_9-10-11-12.dat 465 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/f_forces_coeff.Dihedral.total.dihedrals_mid.dat 1209 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/f_forces_coeff.Pair_Interaction.total.pairs.dat 930 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/f_struct.Angle.total.angles_1-2-3.dat 1240 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/f_struct.Angle.total.angles_10-11-12.dat 868 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/f_struct.Angle.total.angles_2-3-4.dat 992 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/f_struct.Angle.total.angles_9-10-11.dat 806 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/f_struct.Angle.total.angles_mid.dat 1116 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/f_struct.BondStretch.total.bonds.dat 5890 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/f_struct.Dihedral.total.dihedrals_1-2-3-4.dat 4960 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/f_struct.Dihedral.total.dihedrals_2-3-4-5.dat 5890 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/f_struct.Dihedral.total.dihedrals_8-9-10-11.dat 7130 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/f_struct.Dihedral.total.dihedrals_9-10-11-12.dat 4650 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/f_struct.Dihedral.total.dihedrals_mid.dat 11811 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/f_struct.Pair_Interaction.total.pairs.dat 589 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/f_struct_coeff.Dihedral.total.dihedrals_1-2-3-4.dat 496 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/f_struct_coeff.Dihedral.total.dihedrals_2-3-4-5.dat 589 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/f_struct_coeff.Dihedral.total.dihedrals_8-9-10-11.dat 713 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/f_struct_coeff.Dihedral.total.dihedrals_9-10-11-12.dat 465 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/f_struct_coeff.Dihedral.total.dihedrals_mid.dat 1209 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/f_struct_coeff.Pair_Interaction.total.pairs.dat 930 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/g.Angle.total.angles_1-2-3.dat 1240 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/g.Angle.total.angles_10-11-12.dat 868 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/g.Angle.total.angles_2-3-4.dat 992 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/g.Angle.total.angles_9-10-11.dat 806 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/g.Angle.total.angles_mid.dat 1116 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/g.BondStretch.total.bonds.dat 5890 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/g.Dihedral.total.dihedrals_1-2-3-4.dat 4960 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/g.Dihedral.total.dihedrals_2-3-4-5.dat 5890 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/g.Dihedral.total.dihedrals_8-9-10-11.dat 7130 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/g.Dihedral.total.dihedrals_9-10-11-12.dat 4650 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/g.Dihedral.total.dihedrals_mid.dat 11811 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/g.Pair_Interaction.total.pairs.dat 930 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/g_cnt.Angle.total.angles_1-2-3.dat 1240 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/g_cnt.Angle.total.angles_10-11-12.dat 868 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/g_cnt.Angle.total.angles_2-3-4.dat 992 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/g_cnt.Angle.total.angles_9-10-11.dat 806 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/g_cnt.Angle.total.angles_mid.dat 1116 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/g_cnt.BondStretch.total.bonds.dat 5890 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/g_cnt.Dihedral.total.dihedrals_1-2-3-4.dat 4960 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/g_cnt.Dihedral.total.dihedrals_2-3-4-5.dat 5890 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/g_cnt.Dihedral.total.dihedrals_8-9-10-11.dat 7130 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/g_cnt.Dihedral.total.dihedrals_9-10-11-12.dat 4650 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/g_cnt.Dihedral.total.dihedrals_mid.dat 11811 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/g_cnt.Pair_Interaction.total.pairs.dat 589 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/g_cnt_coeff.Dihedral.total.dihedrals_1-2-3-4.dat 496 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/g_cnt_coeff.Dihedral.total.dihedrals_2-3-4-5.dat 589 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/g_cnt_coeff.Dihedral.total.dihedrals_8-9-10-11.dat 713 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/g_cnt_coeff.Dihedral.total.dihedrals_9-10-11-12.dat 465 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/g_cnt_coeff.Dihedral.total.dihedrals_mid.dat 1209 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/g_cnt_coeff.Pair_Interaction.total.pairs.dat 589 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/g_coeff.Dihedral.total.dihedrals_1-2-3-4.dat 496 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/g_coeff.Dihedral.total.dihedrals_2-3-4-5.dat 589 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/g_coeff.Dihedral.total.dihedrals_8-9-10-11.dat 713 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/g_coeff.Dihedral.total.dihedrals_9-10-11-12.dat 465 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/g_coeff.Dihedral.total.dihedrals_mid.dat 1209 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/g_coeff.Pair_Interaction.total.pairs.dat 106 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/inp.txt 93594 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/log.txt 10411 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/out.total.txt 4590 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/par.txt 2068 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/qsub.sh 25 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/save.FF.dat 19868 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/save.L.dat 10173597 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/save.M.dat 10127532 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/save.M2.dat 10229530 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/save.M_cnt.dat 8 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/save.Nf.dat 19948 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/save.b_forces.dat 20391 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/save.b_struct.dat 10127532 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/save.d2M.dat 20807 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/save.d2b.dat 19873 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/save.g.dat 19625 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/save.g_cnt.dat 19625 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/save.rescale.dat 22732 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_angle_dih_pair_allendtypes_CONSTdist_REGnb/summarize_input.txt 0 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4/ 1085 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4/L.Angle.total.angles.dat 1116 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4/L.BondStretch.total.bonds.dat 992 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4/L.BondStretch.total.bonds_1-3.dat 4681 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4/L.IntraMolec_NB_Pair.total.intra_1-4.dat 11811 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4/L.Pair_Interaction.total.pairs.dat 496 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4/L_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 1209 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4/L_coeff.Pair_Interaction.total.pairs.dat 4299 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4/Protein_A.itp 3381 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4/S.dat 3381 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4/S_CONST.dat 1085 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4/b_forces.Angle.total.angles.dat 1116 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4/b_forces.BondStretch.total.bonds.dat 992 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4/b_forces.BondStretch.total.bonds_1-3.dat 4681 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4/b_forces.IntraMolec_NB_Pair.total.intra_1-4.dat 11811 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4/b_forces.Pair_Interaction.total.pairs.dat 496 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4/b_forces_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 1209 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4/b_forces_coeff.Pair_Interaction.total.pairs.dat 1085 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4/b_struct.Angle.total.angles.dat 1116 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4/b_struct.BondStretch.total.bonds.dat 992 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4/b_struct.BondStretch.total.bonds_1-3.dat 4681 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4/b_struct.IntraMolec_NB_Pair.total.intra_1-4.dat 11811 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4/b_struct.Pair_Interaction.total.pairs.dat 496 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4/b_struct_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 1209 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4/b_struct_coeff.Pair_Interaction.total.pairs.dat 61345 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4/cgff-polyALA-FM_noH2O.o3686950 651 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4/cgpolyALA_opls.gro 2091 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4/cgpolyALA_opls.mdp 445 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4/cgpolyALA_opls.top 5176 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4/cgpolyALA_opls.tpr 0 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4/cgsim/ 0 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4/cgsim/Emin/ 338 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4/cgsim/Emin/Emin_Commands.txt 4780 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4/cgsim/Emin/Protein_A.itp 609 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4/cgsim/Emin/cgpolyALA_opls.Emin.gro 585 11-09-2014 16:52 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ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4/cgsim/Emin/qsub.sh 238 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4/cgsim/Emin/qsub_xj.sh 2102 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4/cgsim/Emin/run_gmx.sh 145838 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4/cgsim/Emin/table.xvg 14976 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4/cgsim/Emin/table_a0.xvg 66466 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4/cgsim/Emin/table_b0.xvg 13286 11-09-2014 16:52 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ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4/cgsim/Equil/qsub_xj.sh 2131 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4/cgsim/Equil/run_gmx.sh 5356 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4/cgsim/Equil/state.cpt 145838 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4/cgsim/Equil/table.xvg 14976 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4/cgsim/Equil/table_a0.xvg 66466 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4/cgsim/Equil/table_b0.xvg 13286 11-09-2014 16:52 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22351 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4/edit/f_dih.dat 1085 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4/edit/f_forces.Angle.total.angles.dat 1116 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4/edit/f_forces.BondStretch.total.bonds.dat 992 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4/edit/f_forces.BondStretch.total.bonds_1-3.dat 22351 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4/edit/f_forces.Dihedral.total.dihedrals.dat 4681 11-09-2014 16:52 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11811 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4/f_struct.Pair_Interaction.total.pairs.dat 496 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4/f_struct_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 1209 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4/f_struct_coeff.Pair_Interaction.total.pairs.dat 1085 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4/g.Angle.total.angles.dat 1116 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4/g.BondStretch.total.bonds.dat 992 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4/g.BondStretch.total.bonds_1-3.dat 4681 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4/g.IntraMolec_NB_Pair.total.intra_1-4.dat 11811 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4/g.Pair_Interaction.total.pairs.dat 1085 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4/g_cnt.Angle.total.angles.dat 1116 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4/g_cnt.BondStretch.total.bonds.dat 992 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4/g_cnt.BondStretch.total.bonds_1-3.dat 4681 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4/g_cnt.IntraMolec_NB_Pair.total.intra_1-4.dat 11811 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4/g_cnt.Pair_Interaction.total.pairs.dat 496 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4/g_cnt_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 1209 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4/g_cnt_coeff.Pair_Interaction.total.pairs.dat 496 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4/g_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 1209 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4/g_coeff.Pair_Interaction.total.pairs.dat 101 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4/inp.txt 33891 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4/log.txt 10358 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4/mdout.mdp 4842 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4/out.total.txt 1955 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4/par.txt 1695 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4/qsub.sh 25 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4/save.FF.dat 6862 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4/save.L.dat 1230806 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4/save.M.dat 1220960 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4/save.M2.dat 1267922 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4/save.M_cnt.dat 8 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4/save.Nf.dat 6971 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4/save.b_forces.dat 7077 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4/save.b_struct.dat 1220968 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4/save.d2M.dat 7422 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4/save.d2b.dat 6911 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4/save.g.dat 6822 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4/save.g_cnt.dat 6822 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4/save.rescale.dat 6123 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4/summarize_input.txt 0 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/ 1085 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/L.Angle.total.angles.dat 1116 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/L.BondStretch.total.bonds.dat 992 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/L.BondStretch.total.bonds_1-3.dat 4681 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/L.IntraMolec_NB_Pair.total.intra_1-4.dat 6851 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/L.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/L.Pair_Interaction.total.pairs.dat 496 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/L_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 713 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/L_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/L_coeff.Pair_Interaction.total.pairs.dat 4291 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/Protein_A.itp 3465 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/S.dat 3465 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/S_CONST.dat 1085 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/b_forces.Angle.total.angles.dat 1116 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/b_forces.BondStretch.total.bonds.dat 992 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/b_forces.BondStretch.total.bonds_1-3.dat 4681 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/b_forces.IntraMolec_NB_Pair.total.intra_1-4.dat 6851 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/b_forces.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/b_forces.Pair_Interaction.total.pairs.dat 496 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/b_forces_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 713 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/b_forces_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/b_forces_coeff.Pair_Interaction.total.pairs.dat 1085 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/b_struct.Angle.total.angles.dat 1116 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/b_struct.BondStretch.total.bonds.dat 992 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/b_struct.BondStretch.total.bonds_1-3.dat 4681 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/b_struct.IntraMolec_NB_Pair.total.intra_1-4.dat 6851 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/b_struct.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/b_struct.Pair_Interaction.total.pairs.dat 496 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/b_struct_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 713 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/b_struct_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/b_struct_coeff.Pair_Interaction.total.pairs.dat 61421 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/cgff-polyALA-FM_noH2O.o3686659 651 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/cgpolyALA_opls.gro 2091 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/cgpolyALA_opls.mdp 445 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/cgpolyALA_opls.top 5408 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/cgpolyALA_opls.tpr 0 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/cgsim/ 0 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/cgsim/Emin/ 338 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/cgsim/Emin/Emin_Commands.txt 4772 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/cgsim/Emin/Protein_A.itp 609 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/cgsim/Emin/cgpolyALA_opls.Emin.gro 585 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/cgsim/Emin/cgpolyALA_opls.gro 5344 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/cgsim/Emin/cgpolyALA_opls.tpr 106 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/cgsim/Emin/mart_polyALA_Equil_POSRES.o3686824 4667 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/cgsim/Emin/mart_trp_zip.Emin.mdp 995 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/cgsim/Emin/mart_trp_zip.top 10323 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/cgsim/Emin/mdout-cgpolyALA_opls.mdp 238 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/cgsim/Emin/qsub.sh 238 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/cgsim/Emin/qsub_xj.sh 2102 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/cgsim/Emin/run_gmx.sh 145775 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/cgsim/Emin/table.xvg 14975 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/cgsim/Emin/table_a0.xvg 66466 11-09-2014 16:52 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238 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/cgsim/Equil/qsub.sh 238 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/cgsim/Equil/qsub_xj.sh 2131 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/cgsim/Equil/run_gmx.sh 5356 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/cgsim/Equil/state.cpt 145775 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/cgsim/Equil/table.xvg 14975 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/cgsim/Equil/table_a0.xvg 66466 11-09-2014 16:52 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ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/cgsim/Prod_run/table_b0.xvg 13285 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/cgsim/Prod_run/table_b1.xvg 29922 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/cgsim/Prod_run/table_d0.xvg 148754 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/cgsim/Prod_run/tablep.xvg 0 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/edit/ 737 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/edit/combine_tables.py 4681 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/edit/f_1-4.dat 6851 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/edit/f_1-5.dat 1085 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/edit/f_angle.dat 1116 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/edit/f_bond.dat 992 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/edit/f_bond_1-3.dat 22351 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/edit/f_dih.dat 1085 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/edit/f_forces.Angle.total.angles.dat 1116 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/edit/f_forces.BondStretch.total.bonds.dat 992 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/edit/f_forces.BondStretch.total.bonds_1-3.dat 22351 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/edit/f_forces.Dihedral.total.dihedrals.dat 4681 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/edit/f_forces.IntraMolec_NB_Pair.total.intra_1-4.dat 6851 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/edit/f_forces.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/edit/f_forces.Pair_Interaction.total.pairs.dat 5921 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/edit/f_pairs.dat 941 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/edit/run.make_gmx4_table.sh 145775 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/edit/table.xvg 14975 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/edit/table_a0.xvg 66466 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/edit/table_b0.xvg 13285 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/edit/table_b1.xvg 29922 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/edit/table_d0.xvg 148754 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/edit/tablep.xvg 145689 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/edit/tablep_1-4.xvg 145659 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/edit/tablep_1-5.xvg 1085 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/f_forces.Angle.total.angles.dat 1116 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/f_forces.BondStretch.total.bonds.dat 992 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/f_forces.BondStretch.total.bonds_1-3.dat 22351 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/f_forces.Dihedral.total.dihedrals.dat 4681 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/f_forces.IntraMolec_NB_Pair.total.intra_1-4.dat 6851 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/f_forces.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/f_forces.Pair_Interaction.total.pairs.dat 496 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/f_forces_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 713 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/f_forces_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/f_forces_coeff.Pair_Interaction.total.pairs.dat 1085 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/f_struct.Angle.total.angles.dat 1116 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/f_struct.BondStretch.total.bonds.dat 992 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/f_struct.BondStretch.total.bonds_1-3.dat 22351 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/f_struct.Dihedral.total.dihedrals.dat 4681 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/f_struct.IntraMolec_NB_Pair.total.intra_1-4.dat 6851 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/f_struct.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/f_struct.Pair_Interaction.total.pairs.dat 496 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/f_struct_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 713 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/f_struct_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/f_struct_coeff.Pair_Interaction.total.pairs.dat 1085 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/g.Angle.total.angles.dat 1116 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/g.BondStretch.total.bonds.dat 992 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/g.BondStretch.total.bonds_1-3.dat 4681 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/g.IntraMolec_NB_Pair.total.intra_1-4.dat 6851 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/g.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/g.Pair_Interaction.total.pairs.dat 1085 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/g_cnt.Angle.total.angles.dat 1116 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/g_cnt.BondStretch.total.bonds.dat 992 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/g_cnt.BondStretch.total.bonds_1-3.dat 4681 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/g_cnt.IntraMolec_NB_Pair.total.intra_1-4.dat 6851 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/g_cnt.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/g_cnt.Pair_Interaction.total.pairs.dat 496 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/g_cnt_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 713 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/g_cnt_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/g_cnt_coeff.Pair_Interaction.total.pairs.dat 496 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/g_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 713 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/g_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/g_coeff.Pair_Interaction.total.pairs.dat 101 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/inp.txt 39457 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/log.txt 5609 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/out.total.txt 1952 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/par.txt 1695 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/qsub.sh 25 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/save.FF.dat 8116 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/save.L.dat 1723891 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/save.M.dat 1711901 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/save.M2.dat 1760173 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/save.M_cnt.dat 8 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/save.Nf.dat 8243 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/save.b_forces.dat 8379 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/save.b_struct.dat 1711909 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/save.d2M.dat 8681 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/save.d2b.dat 8183 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/save.g.dat 8071 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/save.g_cnt.dat 8071 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/save.rescale.dat 6886 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_analdih_pair_1-4_1-5/summarize_input.txt 0 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_angle1-4-2_analdih_pair_1-4_1-5/ 1085 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_angle1-4-2_analdih_pair_1-4_1-5/L.Angle.total.angles.dat 527 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_angle1-4-2_analdih_pair_1-4_1-5/L.Angle.total.angles_1-4-2.dat 1116 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_angle1-4-2_analdih_pair_1-4_1-5/L.BondStretch.total.bonds.dat 992 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_angle1-4-2_analdih_pair_1-4_1-5/L.BondStretch.total.bonds_1-3.dat 4681 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_angle1-4-2_analdih_pair_1-4_1-5/L.IntraMolec_NB_Pair.total.intra_1-4.dat 6851 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_angle1-4-2_analdih_pair_1-4_1-5/L.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_angle1-4-2_analdih_pair_1-4_1-5/L.Pair_Interaction.total.pairs.dat 496 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_angle1-4-2_analdih_pair_1-4_1-5/L_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 713 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_angle1-4-2_analdih_pair_1-4_1-5/L_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_angle1-4-2_analdih_pair_1-4_1-5/L_coeff.Pair_Interaction.total.pairs.dat 5406 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_angle1-4-2_analdih_pair_1-4_1-5/Protein_A.itp 3822 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_angle1-4-2_analdih_pair_1-4_1-5/S.dat 3822 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_angle1-4-2_analdih_pair_1-4_1-5/S_CONST.dat 1085 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_angle1-4-2_analdih_pair_1-4_1-5/b_forces.Angle.total.angles.dat 527 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_angle1-4-2_analdih_pair_1-4_1-5/b_forces.Angle.total.angles_1-4-2.dat 1116 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_angle1-4-2_analdih_pair_1-4_1-5/b_forces.BondStretch.total.bonds.dat 992 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_angle1-4-2_analdih_pair_1-4_1-5/b_forces.BondStretch.total.bonds_1-3.dat 4681 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_angle1-4-2_analdih_pair_1-4_1-5/b_forces.IntraMolec_NB_Pair.total.intra_1-4.dat 6851 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_angle1-4-2_analdih_pair_1-4_1-5/b_forces.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_angle1-4-2_analdih_pair_1-4_1-5/b_forces.Pair_Interaction.total.pairs.dat 496 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_angle1-4-2_analdih_pair_1-4_1-5/b_forces_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 713 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_angle1-4-2_analdih_pair_1-4_1-5/b_forces_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_angle1-4-2_analdih_pair_1-4_1-5/b_forces_coeff.Pair_Interaction.total.pairs.dat 1085 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_angle1-4-2_analdih_pair_1-4_1-5/b_struct.Angle.total.angles.dat 527 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_angle1-4-2_analdih_pair_1-4_1-5/b_struct.Angle.total.angles_1-4-2.dat 1116 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_angle1-4-2_analdih_pair_1-4_1-5/b_struct.BondStretch.total.bonds.dat 992 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_angle1-4-2_analdih_pair_1-4_1-5/b_struct.BondStretch.total.bonds_1-3.dat 4681 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_angle1-4-2_analdih_pair_1-4_1-5/b_struct.IntraMolec_NB_Pair.total.intra_1-4.dat 6851 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_angle1-4-2_analdih_pair_1-4_1-5/b_struct.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:52 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ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_angle1-4-2_analdih_pair_1-4_1-5/f_forces.Angle.total.angles_1-4-2.dat 1116 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_angle1-4-2_analdih_pair_1-4_1-5/f_forces.BondStretch.total.bonds.dat 992 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_angle1-4-2_analdih_pair_1-4_1-5/f_forces.BondStretch.total.bonds_1-3.dat 22351 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_angle1-4-2_analdih_pair_1-4_1-5/f_forces.Dihedral.total.dihedrals.dat 4681 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_angle1-4-2_analdih_pair_1-4_1-5/f_forces.IntraMolec_NB_Pair.total.intra_1-4.dat 6851 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_angle1-4-2_analdih_pair_1-4_1-5/f_forces.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_angle1-4-2_analdih_pair_1-4_1-5/f_forces.Pair_Interaction.total.pairs.dat 496 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_angle1-4-2_analdih_pair_1-4_1-5/f_forces_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 713 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_angle1-4-2_analdih_pair_1-4_1-5/f_forces_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_angle1-4-2_analdih_pair_1-4_1-5/f_forces_coeff.Pair_Interaction.total.pairs.dat 1085 11-09-2014 16:52 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ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_angle1-4-2_analdih_pair_1-4_1-5/f_struct.IntraMolec_NB_Pair.total.intra_1-4.dat 6851 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_angle1-4-2_analdih_pair_1-4_1-5/f_struct.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_angle1-4-2_analdih_pair_1-4_1-5/f_struct.Pair_Interaction.total.pairs.dat 496 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_angle1-4-2_analdih_pair_1-4_1-5/f_struct_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 713 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_angle1-4-2_analdih_pair_1-4_1-5/f_struct_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_angle1-4-2_analdih_pair_1-4_1-5/f_struct_coeff.Pair_Interaction.total.pairs.dat 1085 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_angle1-4-2_analdih_pair_1-4_1-5/g.Angle.total.angles.dat 527 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_angle1-4-2_analdih_pair_1-4_1-5/g.Angle.total.angles_1-4-2.dat 1116 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_angle1-4-2_analdih_pair_1-4_1-5/g.BondStretch.total.bonds.dat 992 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_angle1-4-2_analdih_pair_1-4_1-5/g.BondStretch.total.bonds_1-3.dat 4681 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_angle1-4-2_analdih_pair_1-4_1-5/g.IntraMolec_NB_Pair.total.intra_1-4.dat 6851 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_angle1-4-2_analdih_pair_1-4_1-5/g.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_angle1-4-2_analdih_pair_1-4_1-5/g.Pair_Interaction.total.pairs.dat 1085 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_angle1-4-2_analdih_pair_1-4_1-5/g_cnt.Angle.total.angles.dat 527 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_angle1-4-2_analdih_pair_1-4_1-5/g_cnt.Angle.total.angles_1-4-2.dat 1116 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_angle1-4-2_analdih_pair_1-4_1-5/g_cnt.BondStretch.total.bonds.dat 992 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_angle1-4-2_analdih_pair_1-4_1-5/g_cnt.BondStretch.total.bonds_1-3.dat 4681 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_angle1-4-2_analdih_pair_1-4_1-5/g_cnt.IntraMolec_NB_Pair.total.intra_1-4.dat 6851 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_angle1-4-2_analdih_pair_1-4_1-5/g_cnt.IntraMolec_NB_Pair.total.intra_1-5.dat 5921 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_angle1-4-2_analdih_pair_1-4_1-5/g_cnt.Pair_Interaction.total.pairs.dat 496 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_angle1-4-2_analdih_pair_1-4_1-5/g_cnt_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 713 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_angle1-4-2_analdih_pair_1-4_1-5/g_cnt_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_angle1-4-2_analdih_pair_1-4_1-5/g_cnt_coeff.Pair_Interaction.total.pairs.dat 496 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_angle1-4-2_analdih_pair_1-4_1-5/g_coeff.IntraMolec_NB_Pair.total.intra_1-4.dat 713 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_angle1-4-2_analdih_pair_1-4_1-5/g_coeff.IntraMolec_NB_Pair.total.intra_1-5.dat 620 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_angle1-4-2_analdih_pair_1-4_1-5/g_coeff.Pair_Interaction.total.pairs.dat 101 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_angle1-4-2_analdih_pair_1-4_1-5/inp.txt 48214 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_angle1-4-2_analdih_pair_1-4_1-5/log.txt 10358 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_angle1-4-2_analdih_pair_1-4_1-5/mdout.mdp 6466 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_angle1-4-2_analdih_pair_1-4_1-5/out.total.txt 1949 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_angle1-4-2_analdih_pair_1-4_1-5/par.txt 1695 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_angle1-4-2_analdih_pair_1-4_1-5/qsub.sh 25 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_angle1-4-2_analdih_pair_1-4_1-5/save.FF.dat 10035 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_angle1-4-2_analdih_pair_1-4_1-5/save.L.dat 2640135 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_angle1-4-2_analdih_pair_1-4_1-5/save.M.dat 2623426 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_angle1-4-2_analdih_pair_1-4_1-5/save.M2.dat 2684812 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_angle1-4-2_analdih_pair_1-4_1-5/save.M_cnt.dat 8 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_angle1-4-2_analdih_pair_1-4_1-5/save.Nf.dat 10188 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_angle1-4-2_analdih_pair_1-4_1-5/save.b_forces.dat 10381 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_angle1-4-2_analdih_pair_1-4_1-5/save.b_struct.dat 2623436 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_angle1-4-2_analdih_pair_1-4_1-5/save.d2M.dat 10685 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_angle1-4-2_analdih_pair_1-4_1-5/save.d2b.dat 10136 11-09-2014 16:52 ALA12_vacuum_tmp/vacuum/CGFF/Calpha/0-300ns/non-published_calculations/bond_bond1-3_angle_angle1-4-2_analdih_pair_1-4_1-5/save.g.dat 9990 11-09-2014 16:52 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