methanol-ref/AA-mapping/1.0-6.0ns/2-site/MethanolSPH/MethanolSPH.ref.trr methanol-ref/AA-mapping/1.0-6.0ns/2-site/MethanolSPH/cgMethanolSPH.gro methanol-ref/AA-mapping/1.0-6.0ns/2-site/MethanolSPH/cgMethanolSPH.mdp methanol-ref/AA-mapping/1.0-6.0ns/2-site/MethanolSPH/cgMethanolSPH.top methanol-ref/AA-mapping/1.0-6.0ns/2-site/MethanolSPH/cgMethanolSPH.tpr methanol-ref/AA-mapping/1.0-6.0ns/2-site/MethanolSPH/cgMethanolSPH.trr methanol-ref/AA-mapping/1.0-6.0ns/2-site/MethanolSPH/mapMethanolSPH.top methanol-ref/AA-mapping/1.0-6.0ns/2-site/MethanolSPH/mdout.mdp methanol-ref/AA-mapping/1.0-6.0ns/2-site/MethanolSPH/shorter_trajs/ methanol-ref/AA-mapping/1.0-6.0ns/2-site/MethanolSPH/shorter_trajs/.log methanol-ref/AA-mapping/1.0-6.0ns/2-site/MethanolSPH/shorter_trajs/cgMethanolSPH.1000.trr methanol-ref/AA-mapping/1.0-6.0ns/2-site/MethanolSPH/shorter_trajs/cgMethanolSPH.2000.trr methanol-ref/AA-mapping/1.0-6.0ns/2-site/MethanolSPH/shorter_trajs/cgMethanolSPH.gro methanol-ref/AA-mapping/1.0-6.0ns/2-site/MethanolSPH/shorter_trajs/cgMethanolSPH.tpr methanol-ref/AA-mapping/1.0-6.0ns/2-site/MethanolSPH/shorter_trajs/cgMethanolSPH.trr methanol-ref/AA-mapping/1.0-6.0ns/2-site/MethanolSPH/shorter_trajs/reduce_frame.sh methanol-ref/AA-mapping/1.0-6.0ns/2-site/MethanolSPH/start/ methanol-ref/AA-mapping/1.0-6.0ns/2-site/MethanolSPH/start/CGMap.sh methanol-ref/AA-mapping/1.0-6.0ns/2-site/MethanolSPH/start/cgMethanolSPH.gro methanol-ref/AA-mapping/1.0-6.0ns/2-site/MethanolSPH/start/cgMethanolSPH.mdp methanol-ref/AA-mapping/1.0-6.0ns/2-site/MethanolSPH/start/cgMethanolSPH.top methanol-ref/AA-mapping/1.0-6.0ns/2-site/MethanolSPH/start/mapMethanolSPH.top methanol-ref/AA-mapping/1.0-6.0ns/2-site/MethanolSPH2/ methanol-ref/AA-mapping/1.0-6.0ns/2-site/MethanolSPH2/CGMap.sh methanol-ref/AA-mapping/1.0-6.0ns/2-site/MethanolSPH2/MethanolSPH2.ref.gro methanol-ref/AA-mapping/1.0-6.0ns/2-site/MethanolSPH2/MethanolSPH2.ref.trr methanol-ref/AA-mapping/1.0-6.0ns/2-site/MethanolSPH2/cgMethanolSPH2.gro methanol-ref/AA-mapping/1.0-6.0ns/2-site/MethanolSPH2/cgMethanolSPH2.mdp methanol-ref/AA-mapping/1.0-6.0ns/2-site/MethanolSPH2/cgMethanolSPH2.top methanol-ref/AA-mapping/1.0-6.0ns/2-site/MethanolSPH2/cgMethanolSPH2.tpr methanol-ref/AA-mapping/1.0-6.0ns/2-site/MethanolSPH2/cgMethanolSPH2.trr methanol-ref/AA-mapping/1.0-6.0ns/2-site/MethanolSPH2/mapMethanolSPH2.top methanol-ref/AA-mapping/1.0-6.0ns/2-site/MethanolSPH2/mdout.mdp methanol-ref/AA-mapping/1.0-6.0ns/2-site/MethanolSPH2/start/ methanol-ref/AA-mapping/1.0-6.0ns/2-site/MethanolSPH2/start/CGMap.sh methanol-ref/AA-mapping/1.0-6.0ns/2-site/MethanolSPH2/start/cgMethanolSPH2.gro methanol-ref/AA-mapping/1.0-6.0ns/2-site/MethanolSPH2/start/cgMethanolSPH2.mdp methanol-ref/AA-mapping/1.0-6.0ns/2-site/MethanolSPH2/start/cgMethanolSPH2.top methanol-ref/AA-mapping/1.0-6.0ns/2-site/MethanolSPH2/start/mapMethanolSPH2.top methanol-ref/AA-mapping/1.0-6.0ns/2-site/orientation/ methanol-ref/AA-mapping/1.0-6.0ns/2-site/orientation/Orientation-MethanolSPH.agr methanol-ref/AA-mapping/1.0-6.0ns/2-site/orientation/Orientation-MethanolSPH2.agr methanol-ref/AA-mapping/1.0-6.0ns/2-site/orientation/log.txt methanol-ref/AA-mapping/1.0-6.0ns/2-site/orientation/orientation.SPH.dat methanol-ref/AA-mapping/1.0-6.0ns/2-site/orientation/orientation.SPH2.dat methanol-ref/AA-mapping/1.0-6.0ns/2-site/orientation/run.sh methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/ methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/Methanol/ methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/Methanol/Disp-rdf.o1006228 methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/Methanol/Methanol.bond.dist.xvg methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/Methanol/Methanol.bond.log methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/Methanol/Methanol.bond.xvg methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/Methanol/bond-dist.sh methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/Methanol/calc_rdf.sh methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/Methanol/clean.sh methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/Methanol/index.ndx methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/Methanol/index_files/ methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/Methanol/index_files/cgMethanol.1000-3500.ndx methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/Methanol/index_files/cgMethanol.1000-6000.ndx methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/Methanol/index_files/cgMethanol.3500-6000.ndx methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/Methanol/log_files/ methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/Methanol/log_files/rdf.mapped.CGC-CGC.DispCorrect.1000-3500.log methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/Methanol/log_files/rdf.mapped.CGC-CGC.DispCorrect.1000-6000.log methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/Methanol/log_files/rdf.mapped.CGC-CGC.DispCorrect.3500-6000.log methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/Methanol/log_files/rdf.mapped.CGC-CGO.DispCorrect.1000-3500.log methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/Methanol/log_files/rdf.mapped.CGC-CGO.DispCorrect.1000-6000.log methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/Methanol/log_files/rdf.mapped.CGC-CGO.DispCorrect.3500-6000.log methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/Methanol/log_files/rdf.mapped.CGO-CGO.DispCorrect.1000-3500.log methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/Methanol/log_files/rdf.mapped.CGO-CGO.DispCorrect.1000-6000.log methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/Methanol/log_files/rdf.mapped.CGO-CGO.DispCorrect.3500-6000.log methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/Methanol/qsub.sh methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/Methanol/rdf_files/ methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/Methanol/rdf_files/rdf.mapped.CGC-CGC.DispCorrect.1000-3500.xvg methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/Methanol/rdf_files/rdf.mapped.CGC-CGC.DispCorrect.1000-6000.xvg methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/Methanol/rdf_files/rdf.mapped.CGC-CGC.DispCorrect.3500-6000.xvg methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/Methanol/rdf_files/rdf.mapped.CGC-CGO.DispCorrect.1000-3500.xvg methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/Methanol/rdf_files/rdf.mapped.CGC-CGO.DispCorrect.1000-6000.xvg methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/Methanol/rdf_files/rdf.mapped.CGC-CGO.DispCorrect.3500-6000.xvg methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/Methanol/rdf_files/rdf.mapped.CGO-CGO.DispCorrect.1000-3500.xvg methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/Methanol/rdf_files/rdf.mapped.CGO-CGO.DispCorrect.1000-6000.xvg methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/Methanol/rdf_files/rdf.mapped.CGO-CGO.DispCorrect.3500-6000.xvg methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/Methanol/rdf_files/rdfs-time-compare.agr methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/Methanol/run_calc.sh methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH/ methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH/Disp-rdf.o1006231 methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH/MethanolSPH.bond.dist.xvg methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH/MethanolSPH.bond.log methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH/MethanolSPH.bond.xvg methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH/bond-dist.sh methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH/calc_rdf.sh methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH/clean.sh methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH/index.ndx methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH/index_files/ methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH/index_files/cgMethanolSPH.1000-3500.ndx methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH/index_files/cgMethanolSPH.1000-6000.ndx methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH/index_files/cgMethanolSPH.3500-6000.ndx methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH/log_files/ methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH/log_files/rdf.mapped.CGC-CGC.DispCorrect.1000-3500.log methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH/log_files/rdf.mapped.CGC-CGC.DispCorrect.1000-6000.log methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH/log_files/rdf.mapped.CGC-CGC.DispCorrect.3500-6000.log methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH/log_files/rdf.mapped.CGC-CGO.DispCorrect.1000-3500.log methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH/log_files/rdf.mapped.CGC-CGO.DispCorrect.1000-6000.log methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH/log_files/rdf.mapped.CGC-CGO.DispCorrect.3500-6000.log methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH/log_files/rdf.mapped.CGO-CGO.DispCorrect.1000-3500.log methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH/log_files/rdf.mapped.CGO-CGO.DispCorrect.1000-6000.log methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH/log_files/rdf.mapped.CGO-CGO.DispCorrect.3500-6000.log methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH/log_files/rdf.mapped.SPH-CGC.DispCorrect.1000-3500.log methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH/log_files/rdf.mapped.SPH-CGC.DispCorrect.1000-6000.log methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH/log_files/rdf.mapped.SPH-CGC.DispCorrect.3500-6000.log methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH/log_files/rdf.mapped.SPH-CGO.DispCorrect.1000-3500.log methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH/log_files/rdf.mapped.SPH-CGO.DispCorrect.1000-6000.log methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH/log_files/rdf.mapped.SPH-CGO.DispCorrect.3500-6000.log methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH/qsub.sh methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH/rdf_files/ methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH/rdf_files/Compare-RDF-SPH-CGM-2Site-MethanolSHP.agr methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH/rdf_files/rdf.mapped.CGC-CGC.DispCorrect.1000-3500.xvg methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH/rdf_files/rdf.mapped.CGC-CGC.DispCorrect.1000-6000.xvg methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH/rdf_files/rdf.mapped.CGC-CGC.DispCorrect.3500-6000.xvg methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH/rdf_files/rdf.mapped.CGC-CGO.DispCorrect.1000-3500.xvg methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH/rdf_files/rdf.mapped.CGC-CGO.DispCorrect.1000-6000.xvg methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH/rdf_files/rdf.mapped.CGC-CGO.DispCorrect.3500-6000.xvg methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH/rdf_files/rdf.mapped.CGO-CGO.DispCorrect.1000-3500.xvg methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH/rdf_files/rdf.mapped.CGO-CGO.DispCorrect.1000-6000.xvg methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH/rdf_files/rdf.mapped.CGO-CGO.DispCorrect.3500-6000.xvg methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH/rdf_files/rdf.mapped.SPH-CGC.DispCorrect.1000-3500.xvg methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH/rdf_files/rdf.mapped.SPH-CGC.DispCorrect.1000-6000.xvg methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH/rdf_files/rdf.mapped.SPH-CGC.DispCorrect.3500-6000.xvg methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH/rdf_files/rdf.mapped.SPH-CGO.DispCorrect.1000-3500.xvg methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH/rdf_files/rdf.mapped.SPH-CGO.DispCorrect.1000-6000.xvg methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH/rdf_files/rdf.mapped.SPH-CGO.DispCorrect.3500-6000.xvg methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH/rdf_files/rdf_time_test.agr methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH/run_calc.sh methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH2/ methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH2/Disp-rdf.o1006232 methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH2/MethanolSPH2.bond.dist.xvg methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH2/MethanolSPH2.bond.log methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH2/MethanolSPH2.bond.xvg methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH2/bond-dist.sh methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH2/calc_rdf.sh methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH2/clean.sh methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH2/index.ndx methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH2/index_files/ methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH2/index_files/cgMethanolSPH2.1000-3500.ndx methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH2/index_files/cgMethanolSPH2.1000-6000.ndx methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH2/index_files/cgMethanolSPH2.3500-6000.ndx methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH2/log_files/ methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH2/log_files/rdf.mapped.CGC-CGC.DispCorrect.1000-3500.log methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH2/log_files/rdf.mapped.CGC-CGC.DispCorrect.1000-6000.log methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH2/log_files/rdf.mapped.CGC-CGC.DispCorrect.3500-6000.log methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH2/log_files/rdf.mapped.CGC-CGO.DispCorrect.1000-3500.log methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH2/log_files/rdf.mapped.CGC-CGO.DispCorrect.1000-6000.log methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH2/log_files/rdf.mapped.CGC-CGO.DispCorrect.3500-6000.log methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH2/log_files/rdf.mapped.CGO-CGO.DispCorrect.1000-3500.log methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH2/log_files/rdf.mapped.CGO-CGO.DispCorrect.1000-6000.log methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH2/log_files/rdf.mapped.CGO-CGO.DispCorrect.3500-6000.log methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH2/log_files/rdf.mapped.SPH-CGC.DispCorrect.1000-3500.log methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH2/log_files/rdf.mapped.SPH-CGC.DispCorrect.1000-6000.log methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH2/log_files/rdf.mapped.SPH-CGC.DispCorrect.3500-6000.log methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH2/log_files/rdf.mapped.SPH-CGO.DispCorrect.1000-3500.log methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH2/log_files/rdf.mapped.SPH-CGO.DispCorrect.1000-6000.log methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH2/log_files/rdf.mapped.SPH-CGO.DispCorrect.3500-6000.log methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH2/qsub.sh methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH2/rdf_files/ methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH2/rdf_files/rdf.mapped.CGC-CGC.DispCorrect.1000-3500.xvg methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH2/rdf_files/rdf.mapped.CGC-CGC.DispCorrect.1000-6000.xvg methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH2/rdf_files/rdf.mapped.CGC-CGC.DispCorrect.3500-6000.xvg methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH2/rdf_files/rdf.mapped.CGC-CGO.DispCorrect.1000-3500.xvg methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH2/rdf_files/rdf.mapped.CGC-CGO.DispCorrect.1000-6000.xvg methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH2/rdf_files/rdf.mapped.CGC-CGO.DispCorrect.3500-6000.xvg methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH2/rdf_files/rdf.mapped.CGO-CGO.DispCorrect.1000-3500.xvg methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH2/rdf_files/rdf.mapped.CGO-CGO.DispCorrect.1000-6000.xvg methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH2/rdf_files/rdf.mapped.CGO-CGO.DispCorrect.3500-6000.xvg methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH2/rdf_files/rdf.mapped.SPH-CGC.DispCorrect.1000-3500.xvg methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH2/rdf_files/rdf.mapped.SPH-CGC.DispCorrect.1000-6000.xvg methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH2/rdf_files/rdf.mapped.SPH-CGC.DispCorrect.3500-6000.xvg methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH2/rdf_files/rdf.mapped.SPH-CGO.DispCorrect.1000-3500.xvg methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH2/rdf_files/rdf.mapped.SPH-CGO.DispCorrect.1000-6000.xvg methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH2/rdf_files/rdf.mapped.SPH-CGO.DispCorrect.3500-6000.xvg methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH2/rdf_files/rdf_time_test.agr methanol-ref/AA-mapping/1.0-6.0ns/2-site/rdfs/MethanolSPH2/run_calc.sh methanol-ref/AA-mapping/1.0-6.0ns/2-site/results/ methanol-ref/AA-mapping/1.0-6.0ns/2-site/results/SPH2_rdfs1.agr methanol-ref/AA-mapping/1.0-6.0ns/2-site/results/SPH2_rdfs2.agr methanol-ref/AA-mapping/1.0-6.0ns/2-site/results/SPH_rdfs1.agr methanol-ref/AA-mapping/1.0-6.0ns/2-site/results/SPH_rdfs2.agr methanol-ref/AA-mapping/1.0-6.0ns/2-site/results/rdf_Bulk.agr methanol-ref/AA-mapping/1.0-6.0ns/2-site/results/rdf_SPH.agr methanol-ref/AA-mapping/6.0-11.0ns/ methanol-ref/AA-mapping/6.0-11.0ns/1-site/ methanol-ref/AA-mapping/6.0-11.0ns/1-site/Methanol/ methanol-ref/AA-mapping/6.0-11.0ns/1-site/Methanol/CGMap.sh methanol-ref/AA-mapping/6.0-11.0ns/1-site/Methanol/Methanol.ref.gro methanol-ref/AA-mapping/6.0-11.0ns/1-site/Methanol/Methanol.ref.trr methanol-ref/AA-mapping/6.0-11.0ns/1-site/Methanol/cgMethanol.gro methanol-ref/AA-mapping/6.0-11.0ns/1-site/Methanol/cgMethanol.mdp methanol-ref/AA-mapping/6.0-11.0ns/1-site/Methanol/cgMethanol.top methanol-ref/AA-mapping/6.0-11.0ns/1-site/Methanol/cgMethanol.tpr methanol-ref/AA-mapping/6.0-11.0ns/1-site/Methanol/cgMethanol.trr methanol-ref/AA-mapping/6.0-11.0ns/1-site/Methanol/mapMethanol.top methanol-ref/AA-mapping/6.0-11.0ns/1-site/Methanol/mdout.mdp methanol-ref/AA-mapping/6.0-11.0ns/1-site/MethanolSPH/ methanol-ref/AA-mapping/6.0-11.0ns/1-site/MethanolSPH/CGMap.sh methanol-ref/AA-mapping/6.0-11.0ns/1-site/MethanolSPH/MethanolSPH.ref.gro