methanol-ref/AA-mapping/6.0-11.0ns/2-site/MethanolSPH/cgMethanolSPH.trr
methanol-ref/AA-mapping/6.0-11.0ns/2-site/MethanolSPH/mapMethanolSPH.top
methanol-ref/AA-mapping/6.0-11.0ns/2-site/MethanolSPH/mdout.mdp
methanol-ref/AA-mapping/6.0-11.0ns/2-site/MethanolSPH2/
methanol-ref/AA-mapping/6.0-11.0ns/2-site/MethanolSPH2/CGMap.sh
methanol-ref/AA-mapping/6.0-11.0ns/2-site/MethanolSPH2/MethanolSPH2.ref.gro
methanol-ref/AA-mapping/6.0-11.0ns/2-site/MethanolSPH2/MethanolSPH2.ref.trr
methanol-ref/AA-mapping/6.0-11.0ns/2-site/MethanolSPH2/cgMethanolSPH2.gro
methanol-ref/AA-mapping/6.0-11.0ns/2-site/MethanolSPH2/cgMethanolSPH2.mdp
methanol-ref/AA-mapping/6.0-11.0ns/2-site/MethanolSPH2/cgMethanolSPH2.top
methanol-ref/AA-mapping/6.0-11.0ns/2-site/MethanolSPH2/cgMethanolSPH2.tpr
methanol-ref/AA-mapping/6.0-11.0ns/2-site/MethanolSPH2/cgMethanolSPH2.trr
methanol-ref/AA-mapping/6.0-11.0ns/2-site/MethanolSPH2/mapMethanolSPH2.top
methanol-ref/AA-mapping/6.0-11.0ns/2-site/MethanolSPH2/mdout.mdp
methanol-ref/AA-mapping/6.0-11.0ns/2-site/rdfs/
methanol-ref/AA-mapping/6.0-11.0ns/2-site/rdfs/Methanol/
methanol-ref/AA-mapping/6.0-11.0ns/2-site/rdfs/Methanol/Disp-rdf.o1015235
methanol-ref/AA-mapping/6.0-11.0ns/2-site/rdfs/Methanol/calc_rdf.sh
methanol-ref/AA-mapping/6.0-11.0ns/2-site/rdfs/Methanol/clean.sh
methanol-ref/AA-mapping/6.0-11.0ns/2-site/rdfs/Methanol/index_files/
methanol-ref/AA-mapping/6.0-11.0ns/2-site/rdfs/Methanol/index_files/cgMethanol.0-5000.ndx
methanol-ref/AA-mapping/6.0-11.0ns/2-site/rdfs/Methanol/log_files/
methanol-ref/AA-mapping/6.0-11.0ns/2-site/rdfs/Methanol/log_files/rdf.mapped.CGC-CGC.DispCorrect.0-5000.log
methanol-ref/AA-mapping/6.0-11.0ns/2-site/rdfs/Methanol/log_files/rdf.mapped.CGC-CGO.DispCorrect.0-5000.log
methanol-ref/AA-mapping/6.0-11.0ns/2-site/rdfs/Methanol/log_files/rdf.mapped.CGO-CGO.DispCorrect.0-5000.log
methanol-ref/AA-mapping/6.0-11.0ns/2-site/rdfs/Methanol/qsub.sh
methanol-ref/AA-mapping/6.0-11.0ns/2-site/rdfs/Methanol/rdf_files/
methanol-ref/AA-mapping/6.0-11.0ns/2-site/rdfs/Methanol/rdf_files/rdf.mapped.CGC-CGC.DispCorrect.0-5000.xvg
methanol-ref/AA-mapping/6.0-11.0ns/2-site/rdfs/Methanol/rdf_files/rdf.mapped.CGC-CGO.DispCorrect.0-5000.xvg
methanol-ref/AA-mapping/6.0-11.0ns/2-site/rdfs/Methanol/rdf_files/rdf.mapped.CGO-CGO.DispCorrect.0-5000.xvg
methanol-ref/AA-mapping/6.0-11.0ns/2-site/rdfs/Methanol/run_calc.sh
methanol-ref/AA-mapping/6.0-11.0ns/2-site/rdfs/MethanolSPH/
methanol-ref/AA-mapping/6.0-11.0ns/2-site/rdfs/MethanolSPH/Disp-rdf.o1015236
methanol-ref/AA-mapping/6.0-11.0ns/2-site/rdfs/MethanolSPH/calc_rdf.sh
methanol-ref/AA-mapping/6.0-11.0ns/2-site/rdfs/MethanolSPH/clean.sh
methanol-ref/AA-mapping/6.0-11.0ns/2-site/rdfs/MethanolSPH/index_files/
methanol-ref/AA-mapping/6.0-11.0ns/2-site/rdfs/MethanolSPH/index_files/cgMethanolSPH.0-5000.ndx
methanol-ref/AA-mapping/6.0-11.0ns/2-site/rdfs/MethanolSPH/log_files/
methanol-ref/AA-mapping/6.0-11.0ns/2-site/rdfs/MethanolSPH/log_files/rdf.mapped.CGC-CGC.DispCorrect.0-5000.log
methanol-ref/AA-mapping/6.0-11.0ns/2-site/rdfs/MethanolSPH/log_files/rdf.mapped.CGC-CGO.DispCorrect.0-5000.log
methanol-ref/AA-mapping/6.0-11.0ns/2-site/rdfs/MethanolSPH/log_files/rdf.mapped.CGO-CGO.DispCorrect.0-5000.log
methanol-ref/AA-mapping/6.0-11.0ns/2-site/rdfs/MethanolSPH/log_files/rdf.mapped.SPH-CGC.DispCorrect.0-5000.log
methanol-ref/AA-mapping/6.0-11.0ns/2-site/rdfs/MethanolSPH/log_files/rdf.mapped.SPH-CGO.DispCorrect.0-5000.log
methanol-ref/AA-mapping/6.0-11.0ns/2-site/rdfs/MethanolSPH/qsub.sh
methanol-ref/AA-mapping/6.0-11.0ns/2-site/rdfs/MethanolSPH/rdf_files/
methanol-ref/AA-mapping/6.0-11.0ns/2-site/rdfs/MethanolSPH/rdf_files/rdf.mapped.CGC-CGC.DispCorrect.0-5000.xvg
methanol-ref/AA-mapping/6.0-11.0ns/2-site/rdfs/MethanolSPH/rdf_files/rdf.mapped.CGC-CGO.DispCorrect.0-5000.xvg
methanol-ref/AA-mapping/6.0-11.0ns/2-site/rdfs/MethanolSPH/rdf_files/rdf.mapped.CGO-CGO.DispCorrect.0-5000.xvg
methanol-ref/AA-mapping/6.0-11.0ns/2-site/rdfs/MethanolSPH/rdf_files/rdf.mapped.SPH-CGC.DispCorrect.0-5000.xvg
methanol-ref/AA-mapping/6.0-11.0ns/2-site/rdfs/MethanolSPH/rdf_files/rdf.mapped.SPH-CGO.DispCorrect.0-5000.xvg
methanol-ref/AA-mapping/6.0-11.0ns/2-site/rdfs/MethanolSPH/run_calc.sh
methanol-ref/AA-mapping/6.0-11.0ns/2-site/rdfs/MethanolSPH2/
methanol-ref/AA-mapping/6.0-11.0ns/2-site/rdfs/MethanolSPH2/Disp-rdf.o1015237
methanol-ref/AA-mapping/6.0-11.0ns/2-site/rdfs/MethanolSPH2/calc_rdf.sh
methanol-ref/AA-mapping/6.0-11.0ns/2-site/rdfs/MethanolSPH2/clean.sh
methanol-ref/AA-mapping/6.0-11.0ns/2-site/rdfs/MethanolSPH2/index_files/
methanol-ref/AA-mapping/6.0-11.0ns/2-site/rdfs/MethanolSPH2/index_files/cgMethanolSPH2.0-5000.ndx
methanol-ref/AA-mapping/6.0-11.0ns/2-site/rdfs/MethanolSPH2/log_files/
methanol-ref/AA-mapping/6.0-11.0ns/2-site/rdfs/MethanolSPH2/log_files/rdf.mapped.CGC-CGC.DispCorrect.0-5000.log
methanol-ref/AA-mapping/6.0-11.0ns/2-site/rdfs/MethanolSPH2/log_files/rdf.mapped.CGC-CGO.DispCorrect.0-5000.log
methanol-ref/AA-mapping/6.0-11.0ns/2-site/rdfs/MethanolSPH2/log_files/rdf.mapped.CGO-CGO.DispCorrect.0-5000.log
methanol-ref/AA-mapping/6.0-11.0ns/2-site/rdfs/MethanolSPH2/log_files/rdf.mapped.SPH-CGC.DispCorrect.0-5000.log
methanol-ref/AA-mapping/6.0-11.0ns/2-site/rdfs/MethanolSPH2/log_files/rdf.mapped.SPH-CGO.DispCorrect.0-5000.log
methanol-ref/AA-mapping/6.0-11.0ns/2-site/rdfs/MethanolSPH2/qsub.sh
methanol-ref/AA-mapping/6.0-11.0ns/2-site/rdfs/MethanolSPH2/rdf_files/
methanol-ref/AA-mapping/6.0-11.0ns/2-site/rdfs/MethanolSPH2/rdf_files/rdf.mapped.CGC-CGC.DispCorrect.0-5000.xvg
methanol-ref/AA-mapping/6.0-11.0ns/2-site/rdfs/MethanolSPH2/rdf_files/rdf.mapped.CGC-CGO.DispCorrect.0-5000.xvg
methanol-ref/AA-mapping/6.0-11.0ns/2-site/rdfs/MethanolSPH2/rdf_files/rdf.mapped.CGO-CGO.DispCorrect.0-5000.xvg
methanol-ref/AA-mapping/6.0-11.0ns/2-site/rdfs/MethanolSPH2/rdf_files/rdf.mapped.SPH-CGC.DispCorrect.0-5000.xvg
methanol-ref/AA-mapping/6.0-11.0ns/2-site/rdfs/MethanolSPH2/rdf_files/rdf.mapped.SPH-CGO.DispCorrect.0-5000.xvg
methanol-ref/AA-mapping/6.0-11.0ns/2-site/rdfs/MethanolSPH2/run_calc.sh
methanol-ref/AA-mapping/Results/
methanol-ref/AA-mapping/Results/1_site_Bulk_Compare_rdf.agr
methanol-ref/AA-mapping/Results/1_site_rdf_CGM-SPHX.agr
methanol-ref/AA-mapping/Results/Compare_Disp_Results_1site.agr
methanol-ref/AA-mapping/combined_10ns/
methanol-ref/AA-mapping/combined_10ns/1-site/
methanol-ref/AA-mapping/combined_10ns/1-site/Methanol/
methanol-ref/AA-mapping/combined_10ns/1-site/Methanol/cgMethanol.gro
methanol-ref/AA-mapping/combined_10ns/1-site/Methanol/cgMethanol.tpr
methanol-ref/AA-mapping/combined_10ns/1-site/Methanol/cgMethanol.trr
methanol-ref/AA-mapping/combined_10ns/1-site/Methanol/combine_traj.sh
methanol-ref/AA-mapping/combined_10ns/1-site/MethanolSPH/
methanol-ref/AA-mapping/combined_10ns/1-site/MethanolSPH/cgMethanolSPH.gro
methanol-ref/AA-mapping/combined_10ns/1-site/MethanolSPH/cgMethanolSPH.tpr
methanol-ref/AA-mapping/combined_10ns/1-site/MethanolSPH/cgMethanolSPH.trr
methanol-ref/AA-mapping/combined_10ns/1-site/MethanolSPH/combine_traj.sh
methanol-ref/AA-mapping/combined_10ns/1-site/MethanolSPH2/
methanol-ref/AA-mapping/combined_10ns/1-site/MethanolSPH2/cgMethanolSPH2.gro
methanol-ref/AA-mapping/combined_10ns/1-site/MethanolSPH2/cgMethanolSPH2.tpr
methanol-ref/AA-mapping/combined_10ns/1-site/MethanolSPH2/cgMethanolSPH2.trr
methanol-ref/AA-mapping/combined_10ns/1-site/MethanolSPH2/combine_traj.sh
methanol-ref/AA-mapping/combined_10ns/1-site/rdfs/
methanol-ref/AA-mapping/combined_10ns/1-site/rdfs/Methanol/
methanol-ref/AA-mapping/combined_10ns/1-site/rdfs/Methanol/Disp-rdf.o1015301
methanol-ref/AA-mapping/combined_10ns/1-site/rdfs/Methanol/calc_rdf.sh
methanol-ref/AA-mapping/combined_10ns/1-site/rdfs/Methanol/clean.sh
methanol-ref/AA-mapping/combined_10ns/1-site/rdfs/Methanol/index_files/
methanol-ref/AA-mapping/combined_10ns/1-site/rdfs/Methanol/index_files/cgMethanol.0-500000.ndx
methanol-ref/AA-mapping/combined_10ns/1-site/rdfs/Methanol/log_files/
methanol-ref/AA-mapping/combined_10ns/1-site/rdfs/Methanol/log_files/rdf.mapped.CGM-CGM.DispCorrect.0-500000.log
methanol-ref/AA-mapping/combined_10ns/1-site/rdfs/Methanol/qsub.sh
methanol-ref/AA-mapping/combined_10ns/1-site/rdfs/Methanol/rdf_files/
methanol-ref/AA-mapping/combined_10ns/1-site/rdfs/Methanol/rdf_files/rdf.mapped.CGM-CGM.DispCorrect.0-500000.xvg
methanol-ref/AA-mapping/combined_10ns/1-site/rdfs/Methanol/run_calc.sh
methanol-ref/AA-mapping/combined_10ns/1-site/rdfs/MethanolSPH/
methanol-ref/AA-mapping/combined_10ns/1-site/rdfs/MethanolSPH/Disp-rdf.o1015310
methanol-ref/AA-mapping/combined_10ns/1-site/rdfs/MethanolSPH/calc_rdf.sh
methanol-ref/AA-mapping/combined_10ns/1-site/rdfs/MethanolSPH/clean.sh
methanol-ref/AA-mapping/combined_10ns/1-site/rdfs/MethanolSPH/index_files/
methanol-ref/AA-mapping/combined_10ns/1-site/rdfs/MethanolSPH/index_files/cgMethanolSPH.0-500000.ndx
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methanol-ref/AA-mapping/combined_10ns/1-site/rdfs/MethanolSPH/log_files/rdf.mapped.CGM-CGM.DispCorrect.0-500000.log
methanol-ref/AA-mapping/combined_10ns/1-site/rdfs/MethanolSPH/log_files/rdf.mapped.SPH-CGM.DispCorrect.0-500000.log
methanol-ref/AA-mapping/combined_10ns/1-site/rdfs/MethanolSPH/qsub.sh
methanol-ref/AA-mapping/combined_10ns/1-site/rdfs/MethanolSPH/rdf_files/
methanol-ref/AA-mapping/combined_10ns/1-site/rdfs/MethanolSPH/rdf_files/rdf.mapped.CGM-CGM.DispCorrect.0-500000.xvg
methanol-ref/AA-mapping/combined_10ns/1-site/rdfs/MethanolSPH/rdf_files/rdf.mapped.SPH-CGM.DispCorrect.0-500000.xvg
methanol-ref/AA-mapping/combined_10ns/1-site/rdfs/MethanolSPH/run_calc.sh
methanol-ref/AA-mapping/combined_10ns/1-site/rdfs/MethanolSPH2/
methanol-ref/AA-mapping/combined_10ns/1-site/rdfs/MethanolSPH2/Disp-rdf.o1015316
methanol-ref/AA-mapping/combined_10ns/1-site/rdfs/MethanolSPH2/calc_rdf.sh
methanol-ref/AA-mapping/combined_10ns/1-site/rdfs/MethanolSPH2/clean.sh
methanol-ref/AA-mapping/combined_10ns/1-site/rdfs/MethanolSPH2/index_files/
methanol-ref/AA-mapping/combined_10ns/1-site/rdfs/MethanolSPH2/index_files/cgMethanolSPH2.0-5000000.ndx
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methanol-ref/AA-mapping/combined_10ns/1-site/rdfs/MethanolSPH2/log_files/rdf.mapped.CGM-CGM.DispCorrect.0-5000000.log
methanol-ref/AA-mapping/combined_10ns/1-site/rdfs/MethanolSPH2/log_files/rdf.mapped.SPH-CGM.DispCorrect.0-5000000.log
methanol-ref/AA-mapping/combined_10ns/1-site/rdfs/MethanolSPH2/qsub.sh
methanol-ref/AA-mapping/combined_10ns/1-site/rdfs/MethanolSPH2/rdf_files/
methanol-ref/AA-mapping/combined_10ns/1-site/rdfs/MethanolSPH2/rdf_files/rdf.mapped.CGM-CGM.DispCorrect.0-5000000.xvg
methanol-ref/AA-mapping/combined_10ns/1-site/rdfs/MethanolSPH2/rdf_files/rdf.mapped.SPH-CGM.DispCorrect.0-5000000.xvg
methanol-ref/AA-mapping/combined_10ns/1-site/rdfs/MethanolSPH2/run_calc.sh
methanol-ref/AA-mapping/combined_10ns/2-site/
methanol-ref/AA-mapping/combined_10ns/2-site/Methanol/
methanol-ref/AA-mapping/combined_10ns/2-site/Methanol/cgMethanol.gro
methanol-ref/AA-mapping/combined_10ns/2-site/Methanol/cgMethanol.tpr
methanol-ref/AA-mapping/combined_10ns/2-site/Methanol/cgMethanol.trr
methanol-ref/AA-mapping/combined_10ns/2-site/Methanol/combine_traj.sh
methanol-ref/AA-mapping/combined_10ns/2-site/Methanol/smaller_traj/
methanol-ref/AA-mapping/combined_10ns/2-site/Methanol/smaller_traj/Methanol.4.log
methanol-ref/AA-mapping/combined_10ns/2-site/Methanol/smaller_traj/cgMethanol.4.trr
methanol-ref/AA-mapping/combined_10ns/2-site/Methanol/smaller_traj/cgMethanol.gro
methanol-ref/AA-mapping/combined_10ns/2-site/Methanol/smaller_traj/cgMethanol.tpr
methanol-ref/AA-mapping/combined_10ns/2-site/Methanol/smaller_traj/reduce_frames.sh
methanol-ref/AA-mapping/combined_10ns/2-site/MethanolSPH/
methanol-ref/AA-mapping/combined_10ns/2-site/MethanolSPH/cgMethanolSPH.gro
methanol-ref/AA-mapping/combined_10ns/2-site/MethanolSPH/cgMethanolSPH.tpr
methanol-ref/AA-mapping/combined_10ns/2-site/MethanolSPH/cgMethanolSPH.trr
methanol-ref/AA-mapping/combined_10ns/2-site/MethanolSPH/combine_traj.sh
methanol-ref/AA-mapping/combined_10ns/2-site/MethanolSPH/smaller-trajs/
methanol-ref/AA-mapping/combined_10ns/2-site/MethanolSPH/smaller-trajs/cgMethanolSPH.10000.trr