===================================================== Content of ZIP archive 12.16.09_sims.zip ===================================================== Archive: 12.16.09_sims.zip Length Date Time Name --------- ---------- ----- ---- 0 05-04-2012 19:14 12.16.09_sims/ 0 05-04-2012 19:13 12.16.09_sims/1000configs/ 248 05-04-2012 19:13 12.16.09_sims/1000configs/align.sh 0 05-04-2012 19:13 12.16.09_sims/1000configs/barrel_l/ 248 05-04-2012 19:13 12.16.09_sims/1000configs/barrel_l/align.sh 817512 05-04-2012 19:13 12.16.09_sims/1000configs/barrel_l/aligned.trr 277 05-04-2012 19:13 12.16.09_sims/1000configs/barrel_l/aminoacids.dat 561060 05-04-2012 19:13 12.16.09_sims/1000configs/barrel_l/barrel_l.T35.edr 4060 05-04-2012 19:13 12.16.09_sims/1000configs/barrel_l/barrel_l.T35.gro 1727 05-04-2012 19:13 12.16.09_sims/1000configs/barrel_l/barrel_l.T35.mdp 10473 05-04-2012 19:13 12.16.09_sims/1000configs/barrel_l/barrel_l.T35.o928677 5058 05-04-2012 19:13 12.16.09_sims/1000configs/barrel_l/barrel_l.T35.pdb 15261 05-04-2012 19:13 12.16.09_sims/1000configs/barrel_l/barrel_l.T35.top 76948 05-04-2012 19:13 12.16.09_sims/1000configs/barrel_l/barrel_l.T35.tpr 1514208 05-04-2012 19:13 12.16.09_sims/1000configs/barrel_l/barrel_l.T35.trr 4060 05-04-2012 19:13 12.16.09_sims/1000configs/barrel_l/confout.gro 123333 05-04-2012 19:13 12.16.09_sims/1000configs/barrel_l/energy.xvg 10215 05-04-2012 19:13 12.16.09_sims/1000configs/barrel_l/mdlog-barrel_l.T35.log 8970 05-04-2012 19:13 12.16.09_sims/1000configs/barrel_l/mdout-barrel_l.T35.mdp 208 05-04-2012 19:13 12.16.09_sims/1000configs/barrel_l/qsub.barrel_l.T35.sh 449 05-04-2012 19:13 12.16.09_sims/1000configs/barrel_l/run_barrel_l.T35.sh 0 05-04-2012 19:13 12.16.09_sims/1000configs/barrel_s/ 248 05-04-2012 19:13 12.16.09_sims/1000configs/barrel_s/align.sh 673224 05-04-2012 19:13 12.16.09_sims/1000configs/barrel_s/aligned.trr 277 05-04-2012 19:13 12.16.09_sims/1000configs/barrel_s/aminoacids.dat 561060 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12.16.09_sims/1000configs/barrel_s/run_barrel_s.T35.sh 0 05-04-2012 19:13 12.16.09_sims/1000configs/helix/ 248 05-04-2012 19:13 12.16.09_sims/1000configs/helix/align.sh 997872 05-04-2012 19:13 12.16.09_sims/1000configs/helix/aligned.trr 277 05-04-2012 19:13 12.16.09_sims/1000configs/helix/aminoacids.dat 5095 05-04-2012 19:13 12.16.09_sims/1000configs/helix/confout.gro 135368 05-04-2012 19:13 12.16.09_sims/1000configs/helix/energy.xvg 577092 05-04-2012 19:13 12.16.09_sims/1000configs/helix/helix.T35.edr 5095 05-04-2012 19:13 12.16.09_sims/1000configs/helix/helix.T35.gro 1727 05-04-2012 19:13 12.16.09_sims/1000configs/helix/helix.T35.mdp 10537 05-04-2012 19:13 12.16.09_sims/1000configs/helix/helix.T35.o928679 6318 05-04-2012 19:13 12.16.09_sims/1000configs/helix/helix.T35.pdb 22854 05-04-2012 19:13 12.16.09_sims/1000configs/helix/helix.T35.top 81252 05-04-2012 19:13 12.16.09_sims/1000configs/helix/helix.T35.tpr 1874748 05-04-2012 19:13 12.16.09_sims/1000configs/helix/helix.T35.trr 10379 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12.16.09_sims/1000configs/mixed/mdlog-mixed.T35.log 8967 05-04-2012 19:13 12.16.09_sims/1000configs/mixed/mdout-mixed.T35.mdp 577092 05-04-2012 19:13 12.16.09_sims/1000configs/mixed/mixed.T35.edr 3922 05-04-2012 19:13 12.16.09_sims/1000configs/mixed/mixed.T35.gro 1727 05-04-2012 19:13 12.16.09_sims/1000configs/mixed/mixed.T35.mdp 10535 05-04-2012 19:13 12.16.09_sims/1000configs/mixed/mixed.T35.o928681 4890 05-04-2012 19:13 12.16.09_sims/1000configs/mixed/mixed.T35.pdb 15353 05-04-2012 19:13 12.16.09_sims/1000configs/mixed/mixed.T35.top 76788 05-04-2012 19:13 12.16.09_sims/1000configs/mixed/mixed.T35.tpr 1466136 05-04-2012 19:13 12.16.09_sims/1000configs/mixed/mixed.T35.trr 202 05-04-2012 19:13 12.16.09_sims/1000configs/mixed/qsub.mixed.T35.sh 446 05-04-2012 19:13 12.16.09_sims/1000configs/mixed/run_mixed.T35.sh 0 05-04-2012 19:13 12.16.09_sims/1000configs/test/ 253 05-04-2012 19:13 12.16.09_sims/1000configs/test/align.sh 769416 05-04-2012 19:13 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12.16.09_sims/CGFF_T35/barrel_l/par.txt 351 05-04-2012 19:14 12.16.09_sims/CGFF_T35/barrel_l/qsub.sh 731 05-04-2012 19:14 12.16.09_sims/CGFF_T35/barrel_l/sort.sh 0 05-04-2012 19:14 12.16.09_sims/CGFF_T35/barrel_s/ 0 05-04-2012 19:14 12.16.09_sims/CGFF_T35/barrel_s/L/ 0 05-04-2012 19:14 12.16.09_sims/CGFF_T35/barrel_s/L/total/ 12431 05-04-2012 19:14 12.16.09_sims/CGFF_T35/barrel_s/L/total/B-B-NB_PairInter-L-total.dat 11191 05-04-2012 19:14 12.16.09_sims/CGFF_T35/barrel_s/L/total/BondTypeIndex1_Dihedral-L-total.dat 11191 05-04-2012 19:14 12.16.09_sims/CGFF_T35/barrel_s/L/total/BondTypeIndex3_Dihedral-L-total.dat 3751 05-04-2012 19:14 12.16.09_sims/CGFF_T35/barrel_s/L/total/BondTypeIndex4_BondStretch-L-total.dat 2201 05-04-2012 19:14 12.16.09_sims/CGFF_T35/barrel_s/L/total/BondTypeIndex5_Angle-L-total.dat 12431 05-04-2012 19:14 12.16.09_sims/CGFF_T35/barrel_s/L/total/PairInter_Type2-L-total.dat 0 05-04-2012 19:14 12.16.09_sims/CGFF_T35/barrel_s/M/ 0 05-04-2012 19:14 12.16.09_sims/CGFF_T35/barrel_s/b/ 0 05-04-2012 19:14 12.16.09_sims/CGFF_T35/barrel_s/b/forces/ 0 05-04-2012 19:14 12.16.09_sims/CGFF_T35/barrel_s/b/forces/total/ 12431 05-04-2012 19:14 12.16.09_sims/CGFF_T35/barrel_s/b/forces/total/B-B-NB_PairInter-b-total.forces.dat 11191 05-04-2012 19:14 12.16.09_sims/CGFF_T35/barrel_s/b/forces/total/BondTypeIndex1_Dihedral-b-total.forces.dat 11191 05-04-2012 19:14 12.16.09_sims/CGFF_T35/barrel_s/b/forces/total/BondTypeIndex3_Dihedral-b-total.forces.dat 3751 05-04-2012 19:14 12.16.09_sims/CGFF_T35/barrel_s/b/forces/total/BondTypeIndex4_BondStretch-b-total.forces.dat 2201 05-04-2012 19:14 12.16.09_sims/CGFF_T35/barrel_s/b/forces/total/BondTypeIndex5_Angle-b-total.forces.dat 12431 05-04-2012 19:14 12.16.09_sims/CGFF_T35/barrel_s/b/forces/total/PairInter_Type2-b-total.forces.dat 0 05-04-2012 19:14 12.16.09_sims/CGFF_T35/barrel_s/b/struct/ 0 05-04-2012 19:14 12.16.09_sims/CGFF_T35/barrel_s/b/struct/total/ 12431 05-04-2012 19:14 12.16.09_sims/CGFF_T35/barrel_s/b/struct/total/B-B-NB_PairInter-b-total.struct.dat 11191 05-04-2012 19:14 12.16.09_sims/CGFF_T35/barrel_s/b/struct/total/BondTypeIndex1_Dihedral-b-total.struct.dat 11191 05-04-2012 19:14 12.16.09_sims/CGFF_T35/barrel_s/b/struct/total/BondTypeIndex3_Dihedral-b-total.struct.dat 3751 05-04-2012 19:14 12.16.09_sims/CGFF_T35/barrel_s/b/struct/total/BondTypeIndex4_BondStretch-b-total.struct.dat 2201 05-04-2012 19:14 12.16.09_sims/CGFF_T35/barrel_s/b/struct/total/BondTypeIndex5_Angle-b-total.struct.dat 12431 05-04-2012 19:14 12.16.09_sims/CGFF_T35/barrel_s/b/struct/total/PairInter_Type2-b-total.struct.dat 74452 05-04-2012 19:14 12.16.09_sims/CGFF_T35/barrel_s/barrel_s.T35.tpr 51738 05-04-2012 19:14 12.16.09_sims/CGFF_T35/barrel_s/cgff-T35_2.o928208 40 05-04-2012 19:14 12.16.09_sims/CGFF_T35/barrel_s/clean.sh 0 05-04-2012 19:14 12.16.09_sims/CGFF_T35/barrel_s/forces/ 0 05-04-2012 19:14 12.16.09_sims/CGFF_T35/barrel_s/forces/forces/ 0 05-04-2012 19:14 12.16.09_sims/CGFF_T35/barrel_s/forces/forces/total/ 12431 05-04-2012 19:14 12.16.09_sims/CGFF_T35/barrel_s/forces/forces/total/B-B-NB_PairInter-f-total.forces.dat 11191 05-04-2012 19:14 12.16.09_sims/CGFF_T35/barrel_s/forces/forces/total/BondTypeIndex1_Dihedral-f-total.forces.dat 11191 05-04-2012 19:14 12.16.09_sims/CGFF_T35/barrel_s/forces/forces/total/BondTypeIndex3_Dihedral-f-total.forces.dat 3751 05-04-2012 19:14 12.16.09_sims/CGFF_T35/barrel_s/forces/forces/total/BondTypeIndex4_BondStretch-f-total.forces.dat 2201 05-04-2012 19:14 12.16.09_sims/CGFF_T35/barrel_s/forces/forces/total/BondTypeIndex5_Angle-f-total.forces.dat 12431 05-04-2012 19:14 12.16.09_sims/CGFF_T35/barrel_s/forces/forces/total/PairInter_Type2-f-total.forces.dat 0 05-04-2012 19:14 12.16.09_sims/CGFF_T35/barrel_s/forces/struct/ 0 05-04-2012 19:14 12.16.09_sims/CGFF_T35/barrel_s/forces/struct/total/ 12431 05-04-2012 19:14 12.16.09_sims/CGFF_T35/barrel_s/forces/struct/total/B-B-NB_PairInter-f-total.struct.dat 11191 05-04-2012 19:14 12.16.09_sims/CGFF_T35/barrel_s/forces/struct/total/BondTypeIndex1_Dihedral-f-total.struct.dat 11191 05-04-2012 19:14 12.16.09_sims/CGFF_T35/barrel_s/forces/struct/total/BondTypeIndex3_Dihedral-f-total.struct.dat 3751 05-04-2012 19:14 12.16.09_sims/CGFF_T35/barrel_s/forces/struct/total/BondTypeIndex4_BondStretch-f-total.struct.dat 2201 05-04-2012 19:14 12.16.09_sims/CGFF_T35/barrel_s/forces/struct/total/BondTypeIndex5_Angle-f-total.struct.dat 12431 05-04-2012 19:14 12.16.09_sims/CGFF_T35/barrel_s/forces/struct/total/PairInter_Type2-f-total.struct.dat 0 05-04-2012 19:14 12.16.09_sims/CGFF_T35/barrel_s/g/ 0 05-04-2012 19:14 12.16.09_sims/CGFF_T35/barrel_s/g/total/ 12431 05-04-2012 19:14 12.16.09_sims/CGFF_T35/barrel_s/g/total/B-B-NB_PairInter-g-total.dat 11191 05-04-2012 19:14 12.16.09_sims/CGFF_T35/barrel_s/g/total/BondTypeIndex1_Dihedral-g-total.dat 11191 05-04-2012 19:14 12.16.09_sims/CGFF_T35/barrel_s/g/total/BondTypeIndex3_Dihedral-g-total.dat 3751 05-04-2012 19:14 12.16.09_sims/CGFF_T35/barrel_s/g/total/BondTypeIndex4_BondStretch-g-total.dat 2201 05-04-2012 19:14 12.16.09_sims/CGFF_T35/barrel_s/g/total/BondTypeIndex5_Angle-g-total.dat 12431 05-04-2012 19:14 12.16.09_sims/CGFF_T35/barrel_s/g/total/PairInter_Type2-g-total.dat 0 05-04-2012 19:14 12.16.09_sims/CGFF_T35/barrel_s/g_cnt/ 0 05-04-2012 19:14 12.16.09_sims/CGFF_T35/barrel_s/g_cnt/total/ 12431 05-04-2012 19:14 12.16.09_sims/CGFF_T35/barrel_s/g_cnt/total/B-B-NB_PairInter-g_cnt-total.dat 11191 05-04-2012 19:14 12.16.09_sims/CGFF_T35/barrel_s/g_cnt/total/BondTypeIndex1_Dihedral-g_cnt-total.dat 11191 05-04-2012 19:14 12.16.09_sims/CGFF_T35/barrel_s/g_cnt/total/BondTypeIndex3_Dihedral-g_cnt-total.dat 3751 05-04-2012 19:14 12.16.09_sims/CGFF_T35/barrel_s/g_cnt/total/BondTypeIndex4_BondStretch-g_cnt-total.dat 2201 05-04-2012 19:14 12.16.09_sims/CGFF_T35/barrel_s/g_cnt/total/BondTypeIndex5_Angle-g_cnt-total.dat 12431 05-04-2012 19:14 12.16.09_sims/CGFF_T35/barrel_s/g_cnt/total/PairInter_Type2-g_cnt-total.dat 78 05-04-2012 19:14 12.16.09_sims/CGFF_T35/barrel_s/inp.txt 0 05-04-2012 19:14 12.16.09_sims/CGFF_T35/barrel_s/log/ 142633 05-04-2012 19:14 12.16.09_sims/CGFF_T35/barrel_s/log/log.txt 117 05-04-2012 19:14 12.16.09_sims/CGFF_T35/barrel_s/log/log_global.txt 7362 05-04-2012 19:14 12.16.09_sims/CGFF_T35/barrel_s/log/log_proc0.txt 7362 05-04-2012 19:14 12.16.09_sims/CGFF_T35/barrel_s/log/log_proc1.txt 7362 05-04-2012 19:14 12.16.09_sims/CGFF_T35/barrel_s/log/log_proc2.txt 7362 05-04-2012 19:14 12.16.09_sims/CGFF_T35/barrel_s/log/log_proc3.txt 7362 05-04-2012 19:14 12.16.09_sims/CGFF_T35/barrel_s/log/log_proc4.txt 7362 05-04-2012 19:14 12.16.09_sims/CGFF_T35/barrel_s/log/log_proc5.txt 7362 05-04-2012 19:14 12.16.09_sims/CGFF_T35/barrel_s/log/log_proc6.txt 7362 05-04-2012 19:14 12.16.09_sims/CGFF_T35/barrel_s/log/log_proc7.txt 2934 05-04-2012 19:14 12.16.09_sims/CGFF_T35/barrel_s/out.txt 3942 05-04-2012 19:14 12.16.09_sims/CGFF_T35/barrel_s/par.txt 351 05-04-2012 19:14 12.16.09_sims/CGFF_T35/barrel_s/qsub.sh 731 05-04-2012 19:14 12.16.09_sims/CGFF_T35/barrel_s/sort.sh 0 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix/ 0 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix/L/ 0 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix/L/total/ 12431 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix/L/total/B-B-NB_PairInter-L-total.dat 11191 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix/L/total/BondTypeIndex1_Dihedral-L-total.dat 11191 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix/L/total/BondTypeIndex2_Dihedral-L-total.dat 3751 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix/L/total/BondTypeIndex4_BondStretch-L-total.dat 2201 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix/L/total/BondTypeIndex5_Angle-L-total.dat 12431 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix/L/total/PairInter_Type2-L-total.dat 0 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix/M/ 0 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix/b/ 0 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix/b/forces/ 0 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix/b/forces/total/ 12431 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix/b/forces/total/B-B-NB_PairInter-b-total.forces.dat 11191 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix/b/forces/total/BondTypeIndex1_Dihedral-b-total.forces.dat 11191 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix/b/forces/total/BondTypeIndex2_Dihedral-b-total.forces.dat 3751 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix/b/forces/total/BondTypeIndex4_BondStretch-b-total.forces.dat 2201 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix/b/forces/total/BondTypeIndex5_Angle-b-total.forces.dat 12431 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix/b/forces/total/PairInter_Type2-b-total.forces.dat 0 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix/b/struct/ 0 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix/b/struct/total/ 12431 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix/b/struct/total/B-B-NB_PairInter-b-total.struct.dat 11191 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix/b/struct/total/BondTypeIndex1_Dihedral-b-total.struct.dat 11191 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix/b/struct/total/BondTypeIndex2_Dihedral-b-total.struct.dat 3751 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix/b/struct/total/BondTypeIndex4_BondStretch-b-total.struct.dat 2201 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix/b/struct/total/BondTypeIndex5_Angle-b-total.struct.dat 12431 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix/b/struct/total/PairInter_Type2-b-total.struct.dat 51666 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix/cgff-T35_2.o928209 40 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix/clean.sh 0 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix/forces/ 0 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix/forces/forces/ 0 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix/forces/forces/total/ 12431 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix/forces/forces/total/B-B-NB_PairInter-f-total.forces.dat 11191 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix/forces/forces/total/BondTypeIndex1_Dihedral-f-total.forces.dat 11191 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix/forces/forces/total/BondTypeIndex2_Dihedral-f-total.forces.dat 3751 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix/forces/forces/total/BondTypeIndex4_BondStretch-f-total.forces.dat 2201 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix/forces/forces/total/BondTypeIndex5_Angle-f-total.forces.dat 12431 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix/forces/forces/total/PairInter_Type2-f-total.forces.dat 0 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix/forces/struct/ 0 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix/forces/struct/total/ 12431 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix/forces/struct/total/B-B-NB_PairInter-f-total.struct.dat 11191 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix/forces/struct/total/BondTypeIndex1_Dihedral-f-total.struct.dat 11191 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix/forces/struct/total/BondTypeIndex2_Dihedral-f-total.struct.dat 3751 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix/forces/struct/total/BondTypeIndex4_BondStretch-f-total.struct.dat 2201 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix/forces/struct/total/BondTypeIndex5_Angle-f-total.struct.dat 12431 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix/forces/struct/total/PairInter_Type2-f-total.struct.dat 0 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix/g/ 0 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix/g/total/ 12431 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix/g/total/B-B-NB_PairInter-g-total.dat 11191 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix/g/total/BondTypeIndex1_Dihedral-g-total.dat 11191 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix/g/total/BondTypeIndex2_Dihedral-g-total.dat 3751 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix/g/total/BondTypeIndex4_BondStretch-g-total.dat 2201 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix/g/total/BondTypeIndex5_Angle-g-total.dat 12431 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix/g/total/PairInter_Type2-g-total.dat 0 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix/g_cnt/ 0 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix/g_cnt/total/ 12431 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix/g_cnt/total/B-B-NB_PairInter-g_cnt-total.dat 11191 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix/g_cnt/total/BondTypeIndex1_Dihedral-g_cnt-total.dat 11191 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix/g_cnt/total/BondTypeIndex2_Dihedral-g_cnt-total.dat 3751 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix/g_cnt/total/BondTypeIndex4_BondStretch-g_cnt-total.dat 2201 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix/g_cnt/total/BondTypeIndex5_Angle-g_cnt-total.dat 12431 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix/g_cnt/total/PairInter_Type2-g_cnt-total.dat 81252 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix/helix.T35.tpr 78 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix/inp.txt 0 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix/log/ 143493 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix/log/log.txt 117 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix/log/log_global.txt 7359 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix/log/log_proc0.txt 7359 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix/log/log_proc1.txt 7359 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix/log/log_proc2.txt 7359 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix/log/log_proc3.txt 7359 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix/log/log_proc4.txt 7359 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix/log/log_proc5.txt 7359 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix/log/log_proc6.txt 7359 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix/log/log_proc7.txt 2700 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix/out.txt 3942 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix/par.txt 351 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix/qsub.sh 731 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix/sort.sh 0 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix_s/ 0 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix_s/L/ 0 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix_s/L/total/ 12431 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix_s/L/total/B-B-NB_PairInter-L-total.dat 11191 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix_s/L/total/BondTypeIndex1_Dihedral-L-total.dat 11191 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix_s/L/total/BondTypeIndex2_Dihedral-L-total.dat 3751 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix_s/L/total/BondTypeIndex4_BondStretch-L-total.dat 2201 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix_s/L/total/BondTypeIndex5_Angle-L-total.dat 12431 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix_s/L/total/PairInter_Type2-L-total.dat 0 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix_s/M/ 0 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix_s/b/ 0 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix_s/b/forces/ 0 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix_s/b/forces/total/ 12431 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix_s/b/forces/total/B-B-NB_PairInter-b-total.forces.dat 11191 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix_s/b/forces/total/BondTypeIndex1_Dihedral-b-total.forces.dat 11191 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix_s/b/forces/total/BondTypeIndex2_Dihedral-b-total.forces.dat 3751 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix_s/b/forces/total/BondTypeIndex4_BondStretch-b-total.forces.dat 2201 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix_s/b/forces/total/BondTypeIndex5_Angle-b-total.forces.dat 12431 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix_s/b/forces/total/PairInter_Type2-b-total.forces.dat 0 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix_s/b/struct/ 0 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix_s/b/struct/total/ 12431 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix_s/b/struct/total/B-B-NB_PairInter-b-total.struct.dat 11191 05-04-2012 19:14 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12.16.09_sims/CGFF_T35/helix_s/inp.txt 0 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix_s/log/ 143334 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix_s/log/log.txt 117 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix_s/log/log_global.txt 7361 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix_s/log/log_proc0.txt 7361 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix_s/log/log_proc1.txt 7361 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix_s/log/log_proc2.txt 7361 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix_s/log/log_proc3.txt 7361 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix_s/log/log_proc4.txt 7361 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix_s/log/log_proc5.txt 7361 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix_s/log/log_proc6.txt 7361 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix_s/log/log_proc7.txt 2700 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix_s/out.txt 3942 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix_s/par.txt 351 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix_s/qsub.sh 731 05-04-2012 19:14 12.16.09_sims/CGFF_T35/helix_s/sort.sh 0 05-04-2012 19:14 12.16.09_sims/CGFF_T35/mixed/ 0 05-04-2012 19:14 12.16.09_sims/CGFF_T35/mixed/L/ 0 05-04-2012 19:14 12.16.09_sims/CGFF_T35/mixed/L/total/ 12431 05-04-2012 19:14 12.16.09_sims/CGFF_T35/mixed/L/total/B-B-NB_PairInter-L-total.dat 11191 05-04-2012 19:14 12.16.09_sims/CGFF_T35/mixed/L/total/BondTypeIndex1_Dihedral-L-total.dat 11191 05-04-2012 19:14 12.16.09_sims/CGFF_T35/mixed/L/total/BondTypeIndex2_Dihedral-L-total.dat 11191 05-04-2012 19:14 12.16.09_sims/CGFF_T35/mixed/L/total/BondTypeIndex3_Dihedral-L-total.dat 3751 05-04-2012 19:14 12.16.09_sims/CGFF_T35/mixed/L/total/BondTypeIndex4_BondStretch-L-total.dat 2201 05-04-2012 19:14 12.16.09_sims/CGFF_T35/mixed/L/total/BondTypeIndex5_Angle-L-total.dat 12431 05-04-2012 19:14 12.16.09_sims/CGFF_T35/mixed/L/total/PairInter_Type2-L-total.dat 0 05-04-2012 19:14 12.16.09_sims/CGFF_T35/mixed/M/ 0 05-04-2012 19:14 12.16.09_sims/CGFF_T35/mixed/b/ 0 05-04-2012 19:14 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12.16.09_sims/CGFF_T35/mixed/forces/forces/total/ 12431 05-04-2012 19:14 12.16.09_sims/CGFF_T35/mixed/forces/forces/total/B-B-NB_PairInter-f-total.forces.dat 11191 05-04-2012 19:14 12.16.09_sims/CGFF_T35/mixed/forces/forces/total/BondTypeIndex1_Dihedral-f-total.forces.dat 11191 05-04-2012 19:14 12.16.09_sims/CGFF_T35/mixed/forces/forces/total/BondTypeIndex2_Dihedral-f-total.forces.dat 11191 05-04-2012 19:14 12.16.09_sims/CGFF_T35/mixed/forces/forces/total/BondTypeIndex3_Dihedral-f-total.forces.dat 3751 05-04-2012 19:14 12.16.09_sims/CGFF_T35/mixed/forces/forces/total/BondTypeIndex4_BondStretch-f-total.forces.dat 2201 05-04-2012 19:14 12.16.09_sims/CGFF_T35/mixed/forces/forces/total/BondTypeIndex5_Angle-f-total.forces.dat 12431 05-04-2012 19:14 12.16.09_sims/CGFF_T35/mixed/forces/forces/total/PairInter_Type2-f-total.forces.dat 0 05-04-2012 19:14 12.16.09_sims/CGFF_T35/mixed/forces/struct/ 0 05-04-2012 19:14 12.16.09_sims/CGFF_T35/mixed/forces/struct/total/ 12431 05-04-2012 19:14 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12.16.09_sims/CGFF_T35/total/g/BondTypeIndex2_Dihedral-g-mixed.T35.dat 11191 05-04-2012 19:14 12.16.09_sims/CGFF_T35/total/g/BondTypeIndex3_Dihedral-g-barrel_l.T35.dat 11191 05-04-2012 19:14 12.16.09_sims/CGFF_T35/total/g/BondTypeIndex3_Dihedral-g-barrel_s.T35.dat 11191 05-04-2012 19:14 12.16.09_sims/CGFF_T35/total/g/BondTypeIndex3_Dihedral-g-mixed.T35.dat 3751 05-04-2012 19:14 12.16.09_sims/CGFF_T35/total/g/BondTypeIndex4_BondStretch-g-barrel_l.T35.dat 3751 05-04-2012 19:14 12.16.09_sims/CGFF_T35/total/g/BondTypeIndex4_BondStretch-g-barrel_s.T35.dat 3751 05-04-2012 19:14 12.16.09_sims/CGFF_T35/total/g/BondTypeIndex4_BondStretch-g-helix.T35.dat 3751 05-04-2012 19:14 12.16.09_sims/CGFF_T35/total/g/BondTypeIndex4_BondStretch-g-helix_s.T35.dat 3751 05-04-2012 19:14 12.16.09_sims/CGFF_T35/total/g/BondTypeIndex4_BondStretch-g-mixed.T35.dat 2201 05-04-2012 19:14 12.16.09_sims/CGFF_T35/total/g/BondTypeIndex5_Angle-g-barrel_l.T35.dat 2201 05-04-2012 19:14 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12.16.09_sims/CGFF_T35/total/g/total/BondTypeIndex1_Dihedral-g-total.dat 11191 05-04-2012 19:14 12.16.09_sims/CGFF_T35/total/g/total/BondTypeIndex2_Dihedral-g-total.dat 11191 05-04-2012 19:14 12.16.09_sims/CGFF_T35/total/g/total/BondTypeIndex3_Dihedral-g-total.dat 3751 05-04-2012 19:14 12.16.09_sims/CGFF_T35/total/g/total/BondTypeIndex4_BondStretch-g-total.dat 2201 05-04-2012 19:14 12.16.09_sims/CGFF_T35/total/g/total/BondTypeIndex5_Angle-g-total.dat 12431 05-04-2012 19:14 12.16.09_sims/CGFF_T35/total/g/total/PairInter_Type2-g-total.dat 0 05-04-2012 19:14 12.16.09_sims/CGFF_T35/total/g_cnt/ 12431 05-04-2012 19:14 12.16.09_sims/CGFF_T35/total/g_cnt/B-B-NB_PairInter-g_cnt-barrel_l.T35.dat 12431 05-04-2012 19:14 12.16.09_sims/CGFF_T35/total/g_cnt/B-B-NB_PairInter-g_cnt-barrel_s.T35.dat 12431 05-04-2012 19:14 12.16.09_sims/CGFF_T35/total/g_cnt/B-B-NB_PairInter-g_cnt-helix.T35.dat 12431 05-04-2012 19:14 12.16.09_sims/CGFF_T35/total/g_cnt/B-B-NB_PairInter-g_cnt-helix_s.T35.dat 12431 05-04-2012 19:14 12.16.09_sims/CGFF_T35/total/g_cnt/B-B-NB_PairInter-g_cnt-mixed.T35.dat 11191 05-04-2012 19:14 12.16.09_sims/CGFF_T35/total/g_cnt/BondTypeIndex1_Dihedral-g_cnt-barrel_l.T35.dat 11191 05-04-2012 19:14 12.16.09_sims/CGFF_T35/total/g_cnt/BondTypeIndex1_Dihedral-g_cnt-barrel_s.T35.dat 11191 05-04-2012 19:14 12.16.09_sims/CGFF_T35/total/g_cnt/BondTypeIndex1_Dihedral-g_cnt-helix.T35.dat 11191 05-04-2012 19:14 12.16.09_sims/CGFF_T35/total/g_cnt/BondTypeIndex1_Dihedral-g_cnt-helix_s.T35.dat 11191 05-04-2012 19:14 12.16.09_sims/CGFF_T35/total/g_cnt/BondTypeIndex1_Dihedral-g_cnt-mixed.T35.dat 11191 05-04-2012 19:14 12.16.09_sims/CGFF_T35/total/g_cnt/BondTypeIndex2_Dihedral-g_cnt-helix.T35.dat 11191 05-04-2012 19:14 12.16.09_sims/CGFF_T35/total/g_cnt/BondTypeIndex2_Dihedral-g_cnt-helix_s.T35.dat 11191 05-04-2012 19:14 12.16.09_sims/CGFF_T35/total/g_cnt/BondTypeIndex2_Dihedral-g_cnt-mixed.T35.dat 11191 05-04-2012 19:14 12.16.09_sims/CGFF_T35/total/g_cnt/BondTypeIndex3_Dihedral-g_cnt-barrel_l.T35.dat 11191 05-04-2012 19:14 12.16.09_sims/CGFF_T35/total/g_cnt/BondTypeIndex3_Dihedral-g_cnt-barrel_s.T35.dat 11191 05-04-2012 19:14 12.16.09_sims/CGFF_T35/total/g_cnt/BondTypeIndex3_Dihedral-g_cnt-mixed.T35.dat 3751 05-04-2012 19:14 12.16.09_sims/CGFF_T35/total/g_cnt/BondTypeIndex4_BondStretch-g_cnt-barrel_l.T35.dat 3751 05-04-2012 19:14 12.16.09_sims/CGFF_T35/total/g_cnt/BondTypeIndex4_BondStretch-g_cnt-barrel_s.T35.dat 3751 05-04-2012 19:14 12.16.09_sims/CGFF_T35/total/g_cnt/BondTypeIndex4_BondStretch-g_cnt-helix.T35.dat 3751 05-04-2012 19:14 12.16.09_sims/CGFF_T35/total/g_cnt/BondTypeIndex4_BondStretch-g_cnt-helix_s.T35.dat 3751 05-04-2012 19:14 12.16.09_sims/CGFF_T35/total/g_cnt/BondTypeIndex4_BondStretch-g_cnt-mixed.T35.dat 2201 05-04-2012 19:14 12.16.09_sims/CGFF_T35/total/g_cnt/BondTypeIndex5_Angle-g_cnt-barrel_l.T35.dat 2201 05-04-2012 19:14 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12.16.09_sims/CGFF_T35/total/g_cnt/total/B-B-NB_PairInter-g_cnt-total.dat 11191 05-04-2012 19:14 12.16.09_sims/CGFF_T35/total/g_cnt/total/BondTypeIndex1_Dihedral-g_cnt-total.dat 11191 05-04-2012 19:14 12.16.09_sims/CGFF_T35/total/g_cnt/total/BondTypeIndex2_Dihedral-g_cnt-total.dat 11191 05-04-2012 19:14 12.16.09_sims/CGFF_T35/total/g_cnt/total/BondTypeIndex3_Dihedral-g_cnt-total.dat 3751 05-04-2012 19:14 12.16.09_sims/CGFF_T35/total/g_cnt/total/BondTypeIndex4_BondStretch-g_cnt-total.dat 2201 05-04-2012 19:14 12.16.09_sims/CGFF_T35/total/g_cnt/total/BondTypeIndex5_Angle-g_cnt-total.dat 12431 05-04-2012 19:14 12.16.09_sims/CGFF_T35/total/g_cnt/total/PairInter_Type2-g_cnt-total.dat 81252 05-04-2012 19:14 12.16.09_sims/CGFF_T35/total/helix.T35.tpr 77000 05-04-2012 19:14 12.16.09_sims/CGFF_T35/total/helix_s.T35.tpr 166 05-04-2012 19:14 12.16.09_sims/CGFF_T35/total/inp.txt 0 05-04-2012 19:14 12.16.09_sims/CGFF_T35/total/log/ 866875 05-04-2012 19:14 12.16.09_sims/CGFF_T35/total/log/log.txt 117 05-04-2012 19:14 12.16.09_sims/CGFF_T35/total/log/log_global.txt 7795 05-04-2012 19:14 12.16.09_sims/CGFF_T35/total/log/log_proc0.txt 7795 05-04-2012 19:14 12.16.09_sims/CGFF_T35/total/log/log_proc1.txt 7795 05-04-2012 19:14 12.16.09_sims/CGFF_T35/total/log/log_proc2.txt 7795 05-04-2012 19:14 12.16.09_sims/CGFF_T35/total/log/log_proc3.txt 7795 05-04-2012 19:14 12.16.09_sims/CGFF_T35/total/log/log_proc4.txt 7795 05-04-2012 19:14 12.16.09_sims/CGFF_T35/total/log/log_proc5.txt 7795 05-04-2012 19:14 12.16.09_sims/CGFF_T35/total/log/log_proc6.txt 7795 05-04-2012 19:14 12.16.09_sims/CGFF_T35/total/log/log_proc7.txt 76788 05-04-2012 19:14 12.16.09_sims/CGFF_T35/total/mixed.T35.tpr 18324 05-04-2012 19:14 12.16.09_sims/CGFF_T35/total/out.txt 3942 05-04-2012 19:14 12.16.09_sims/CGFF_T35/total/par.txt 351 05-04-2012 19:14 12.16.09_sims/CGFF_T35/total/qsub.sh 731 05-04-2012 19:14 12.16.09_sims/CGFF_T35/total/sort.sh 0 05-04-2012 19:14 12.16.09_sims/T35_sims/ 0 05-04-2012 19:14 12.16.09_sims/T35_sims/20000frames/ 30242208 05-04-2012 19:14 12.16.09_sims/T35_sims/20000frames/barrel_l.T35.20000.trr 76948 05-04-2012 19:14 12.16.09_sims/T35_sims/20000frames/barrel_l.T35.tpr 24481776 05-04-2012 19:14 12.16.09_sims/T35_sims/20000frames/barrel_s.T35.20000.trr 74452 05-04-2012 19:14 12.16.09_sims/T35_sims/20000frames/barrel_s.T35.tpr 37442748 05-04-2012 19:14 12.16.09_sims/T35_sims/20000frames/helix.T35.20000.trr 81252 05-04-2012 19:14 12.16.09_sims/T35_sims/20000frames/helix.T35.tpr 28322064 05-04-2012 19:14 12.16.09_sims/T35_sims/20000frames/helix_s.T35.20000.trr 77000 05-04-2012 19:14 12.16.09_sims/T35_sims/20000frames/helix_s.T35.tpr 29282136 05-04-2012 19:14 12.16.09_sims/T35_sims/20000frames/mixed.T35.20000.trr 76788 05-04-2012 19:14 12.16.09_sims/T35_sims/20000frames/mixed.T35.tpr 0 05-04-2012 19:13 12.16.09_sims/T35_sims/barrel_l/ 277 05-04-2012 19:13 12.16.09_sims/T35_sims/barrel_l/aminoacids.dat 30242208 05-04-2012 19:13 12.16.09_sims/T35_sims/barrel_l/barrel_l.T35.20000.trr 10630 05-04-2012 19:13 12.16.09_sims/T35_sims/barrel_l/barrel_l.T35.angle.dist.log 2267 05-04-2012 19:13 12.16.09_sims/T35_sims/barrel_l/barrel_l.T35.angle.dist.xvg 9117 05-04-2012 19:13 12.16.09_sims/T35_sims/barrel_l/barrel_l.T35.bond.dist.log 3956 05-04-2012 19:13 12.16.09_sims/T35_sims/barrel_l/barrel_l.T35.bond.dist.xvg 56001060 05-04-2012 19:13 12.16.09_sims/T35_sims/barrel_l/barrel_l.T35.edr 13664 05-04-2012 19:13 12.16.09_sims/T35_sims/barrel_l/barrel_l.T35.energy.log 12356520 05-04-2012 19:13 12.16.09_sims/T35_sims/barrel_l/barrel_l.T35.energy.xvg 10655 05-04-2012 19:13 12.16.09_sims/T35_sims/barrel_l/barrel_l.T35.extended.dist.log 9090 05-04-2012 19:13 12.16.09_sims/T35_sims/barrel_l/barrel_l.T35.extended.dist.xvg 4060 05-04-2012 19:13 12.16.09_sims/T35_sims/barrel_l/barrel_l.T35.gro 90425 05-04-2012 19:13 12.16.09_sims/T35_sims/barrel_l/barrel_l.T35.log 1725 05-04-2012 19:13 12.16.09_sims/T35_sims/barrel_l/barrel_l.T35.mdp 10474 05-04-2012 19:13 12.16.09_sims/T35_sims/barrel_l/barrel_l.T35.o927233 5058 05-04-2012 19:13 12.16.09_sims/T35_sims/barrel_l/barrel_l.T35.pdb 15261 05-04-2012 19:13 12.16.09_sims/T35_sims/barrel_l/barrel_l.T35.top 76948 05-04-2012 19:13 12.16.09_sims/T35_sims/barrel_l/barrel_l.T35.tpr 151202208 05-04-2012 19:13 12.16.09_sims/T35_sims/barrel_l/barrel_l.T35.trr 10646 05-04-2012 19:13 12.16.09_sims/T35_sims/barrel_l/barrel_l.T35.turn.dist.log 9077 05-04-2012 19:13 12.16.09_sims/T35_sims/barrel_l/barrel_l.T35.turn.dist.xvg 4060 05-04-2012 19:13 12.16.09_sims/T35_sims/barrel_l/confout.gro 2056115 05-04-2012 19:13 12.16.09_sims/T35_sims/barrel_l/distance.xvg 10213 05-04-2012 19:13 12.16.09_sims/T35_sims/barrel_l/mdlog-barrel_l.T35.log 8968 05-04-2012 19:13 12.16.09_sims/T35_sims/barrel_l/mdout-barrel_l.T35.mdp 208 05-04-2012 19:13 12.16.09_sims/T35_sims/barrel_l/qsub.barrel_l.T35.sh 10258 05-04-2012 19:13 12.16.09_sims/T35_sims/barrel_l/rdfB-B.barrel_l.T35.log 2723161 05-04-2012 19:13 12.16.09_sims/T35_sims/barrel_l/rdfB-B.barrel_l.T35.xvg 10217 05-04-2012 19:13 12.16.09_sims/T35_sims/barrel_l/rdfB-L.barrel_l.T35.log 2723007 05-04-2012 19:13 12.16.09_sims/T35_sims/barrel_l/rdfB-L.barrel_l.T35.xvg 10261 05-04-2012 19:13 12.16.09_sims/T35_sims/barrel_l/rdfB-N.barrel_l.T35.log 2722962 05-04-2012 19:13 12.16.09_sims/T35_sims/barrel_l/rdfB-N.barrel_l.T35.xvg 10220 05-04-2012 19:13 12.16.09_sims/T35_sims/barrel_l/rdfL-L.barrel_l.T35.log 2722957 05-04-2012 19:13 12.16.09_sims/T35_sims/barrel_l/rdfL-L.barrel_l.T35.xvg 10202 05-04-2012 19:13 12.16.09_sims/T35_sims/barrel_l/rdfL-N.barrel_l.T35.log 2722955 05-04-2012 19:13 12.16.09_sims/T35_sims/barrel_l/rdfL-N.barrel_l.T35.xvg 10231 05-04-2012 19:13 12.16.09_sims/T35_sims/barrel_l/rdfN-N.barrel_l.T35.log 2722947 05-04-2012 19:13 12.16.09_sims/T35_sims/barrel_l/rdfN-N.barrel_l.T35.xvg 405 05-04-2012 19:13 12.16.09_sims/T35_sims/barrel_l/reduce_frames.sh 449 05-04-2012 19:13 12.16.09_sims/T35_sims/barrel_l/run_barrel_l.T35.sh 0 05-04-2012 19:14 12.16.09_sims/T35_sims/barrel_s/ 277 05-04-2012 19:14 12.16.09_sims/T35_sims/barrel_s/aminoacids.dat 24481776 05-04-2012 19:14 12.16.09_sims/T35_sims/barrel_s/barrel_s.T35.20000.trr 10700 05-04-2012 19:14 12.16.09_sims/T35_sims/barrel_s/barrel_s.T35.angle.dist.log 2223 05-04-2012 19:14 12.16.09_sims/T35_sims/barrel_s/barrel_s.T35.angle.dist.xvg 9136 05-04-2012 19:14 12.16.09_sims/T35_sims/barrel_s/barrel_s.T35.bond.dist.log 4121 05-04-2012 19:14 12.16.09_sims/T35_sims/barrel_s/barrel_s.T35.bond.dist.xvg 56001060 05-04-2012 19:14 12.16.09_sims/T35_sims/barrel_s/barrel_s.T35.edr 13663 05-04-2012 19:14 12.16.09_sims/T35_sims/barrel_s/barrel_s.T35.energy.log 12356518 05-04-2012 19:14 12.16.09_sims/T35_sims/barrel_s/barrel_s.T35.energy.xvg 10667 05-04-2012 19:14 12.16.09_sims/T35_sims/barrel_s/barrel_s.T35.extended.dist.log 9104 05-04-2012 19:14 12.16.09_sims/T35_sims/barrel_s/barrel_s.T35.extended.dist.xvg 3232 05-04-2012 19:14 12.16.09_sims/T35_sims/barrel_s/barrel_s.T35.gro 90417 05-04-2012 19:14 12.16.09_sims/T35_sims/barrel_s/barrel_s.T35.log 1725 05-04-2012 19:14 12.16.09_sims/T35_sims/barrel_s/barrel_s.T35.mdp 10474 05-04-2012 19:14 12.16.09_sims/T35_sims/barrel_s/barrel_s.T35.o927234 4050 05-04-2012 19:14 12.16.09_sims/T35_sims/barrel_s/barrel_s.T35.pdb 12249 05-04-2012 19:14 12.16.09_sims/T35_sims/barrel_s/barrel_s.T35.top 74452 05-04-2012 19:14 12.16.09_sims/T35_sims/barrel_s/barrel_s.T35.tpr 122401776 05-04-2012 19:14 12.16.09_sims/T35_sims/barrel_s/barrel_s.T35.trr 10671 05-04-2012 19:14 12.16.09_sims/T35_sims/barrel_s/barrel_s.T35.turn.dist.log 9075 05-04-2012 19:14 12.16.09_sims/T35_sims/barrel_s/barrel_s.T35.turn.dist.xvg 3232 05-04-2012 19:14 12.16.09_sims/T35_sims/barrel_s/confout.gro 2056116 05-04-2012 19:14 12.16.09_sims/T35_sims/barrel_s/distance.xvg 10213 05-04-2012 19:14 12.16.09_sims/T35_sims/barrel_s/mdlog-barrel_s.T35.log 8968 05-04-2012 19:14 12.16.09_sims/T35_sims/barrel_s/mdout-barrel_s.T35.mdp 208 05-04-2012 19:14 12.16.09_sims/T35_sims/barrel_s/qsub.barrel_s.T35.sh 10214 05-04-2012 19:14 12.16.09_sims/T35_sims/barrel_s/rdfB-B.barrel_s.T35.log 2723136 05-04-2012 19:14 12.16.09_sims/T35_sims/barrel_s/rdfB-B.barrel_s.T35.xvg 10228 05-04-2012 19:14 12.16.09_sims/T35_sims/barrel_s/rdfB-L.barrel_s.T35.log 2723118 05-04-2012 19:14 12.16.09_sims/T35_sims/barrel_s/rdfB-L.barrel_s.T35.xvg 10211 05-04-2012 19:14 12.16.09_sims/T35_sims/barrel_s/rdfB-N.barrel_s.T35.log 2722963 05-04-2012 19:14 12.16.09_sims/T35_sims/barrel_s/rdfB-N.barrel_s.T35.xvg 10240 05-04-2012 19:14 12.16.09_sims/T35_sims/barrel_s/rdfL-L.barrel_s.T35.log 2722950 05-04-2012 19:14 12.16.09_sims/T35_sims/barrel_s/rdfL-L.barrel_s.T35.xvg 10227 05-04-2012 19:14 12.16.09_sims/T35_sims/barrel_s/rdfL-N.barrel_s.T35.log 2722972 05-04-2012 19:14 12.16.09_sims/T35_sims/barrel_s/rdfL-N.barrel_s.T35.xvg 10221 05-04-2012 19:14 12.16.09_sims/T35_sims/barrel_s/rdfN-N.barrel_s.T35.log 2722951 05-04-2012 19:14 12.16.09_sims/T35_sims/barrel_s/rdfN-N.barrel_s.T35.xvg 405 05-04-2012 19:14 12.16.09_sims/T35_sims/barrel_s/reduce_frames.sh 449 05-04-2012 19:14 12.16.09_sims/T35_sims/barrel_s/run_barrel_s.T35.sh 1762 05-04-2012 19:14 12.16.09_sims/T35_sims/bond_analysis.sh 0 05-04-2012 19:14 12.16.09_sims/T35_sims/bond_ndx/ 1394 05-04-2012 19:14 12.16.09_sims/T35_sims/bond_ndx/barrel_l.angle.ndx 1066 05-04-2012 19:14 12.16.09_sims/T35_sims/bond_ndx/barrel_l.bond.ndx 1723 05-04-2012 19:14 12.16.09_sims/T35_sims/bond_ndx/barrel_l.dihedral.ndx 1103 05-04-2012 19:14 12.16.09_sims/T35_sims/bond_ndx/barrel_s.angle.ndx 848 05-04-2012 19:14 12.16.09_sims/T35_sims/bond_ndx/barrel_s.bond.ndx 1360 05-04-2012 19:14 12.16.09_sims/T35_sims/bond_ndx/barrel_s.dihedral.ndx 1040 05-04-2012 19:14 12.16.09_sims/T35_sims/bond_ndx/get_bond_ndx.sh 1758 05-04-2012 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12.16.09_sims/T35_sims/helix/helix.T35.angle.dist.log 2167 05-04-2012 19:14 12.16.09_sims/T35_sims/helix/helix.T35.angle.dist.xvg 9086 05-04-2012 19:14 12.16.09_sims/T35_sims/helix/helix.T35.bond.dist.log 4091 05-04-2012 19:14 12.16.09_sims/T35_sims/helix/helix.T35.bond.dist.xvg 57601092 05-04-2012 19:13 12.16.09_sims/T35_sims/helix/helix.T35.edr 13612 05-04-2012 19:14 12.16.09_sims/T35_sims/helix/helix.T35.energy.log 12356517 05-04-2012 19:14 12.16.09_sims/T35_sims/helix/helix.T35.energy.xvg 5095 05-04-2012 19:14 12.16.09_sims/T35_sims/helix/helix.T35.gro 90363 05-04-2012 19:14 12.16.09_sims/T35_sims/helix/helix.T35.log 1725 05-04-2012 19:14 12.16.09_sims/T35_sims/helix/helix.T35.mdp 10540 05-04-2012 19:14 12.16.09_sims/T35_sims/helix/helix.T35.o927235 6318 05-04-2012 19:14 12.16.09_sims/T35_sims/helix/helix.T35.pdb 22854 05-04-2012 19:14 12.16.09_sims/T35_sims/helix/helix.T35.top 81252 05-04-2012 19:14 12.16.09_sims/T35_sims/helix/helix.T35.tpr 187202748 05-04-2012 19:14 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